RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 ZNF438Q7Z4V0 828 aa7.1□□□□□ -1.27
LEMD3-204ENST00000542032 TXNRD3Q86VQ6 643 aa7.1□□□□□ -1.27
LEMD3-204ENST00000542032 FBXO11Q86XK2 927 aa7.1□□□□□ -1.27
LEMD3-204ENST00000542032 WFDC8Q8IUA0 241 aa7.1□□□□□ -1.27
LEMD3-204ENST00000542032 CACTIN-AS1Q8N1I8 211 aa7.1□□□□□ -1.27
LEMD3-204ENST00000542032 CEP120Q8N960 986 aa7.1□□□□□ -1.27
LEMD3-204ENST00000542032 CCER1Q8TC90 406 aaPredicted RBP7.1□□□□□ -1.27
LEMD3-204ENST00000542032 LENG1Q96BZ8 264 aaPredicted RBP7.1□□□□□ -1.27
LEMD3-204ENST00000542032 RBSNQ9H1K0 784 aa7.1□□□□□ -1.27
LEMD3-204ENST00000542032 CHRDQ9H2X0 955 aa7.1□□□□□ -1.27
LEMD3-204ENST00000542032 SALL4Q9UJQ4 1053 aa7.1□□□□□ -1.27
LEMD3-204ENST00000542032 POLIQ9UNA4 740 aa7.1□□□□□ -1.27
LEMD3-204ENST00000542032 A6NHS1 94 aa7.09□□□□□ -1.27
LEMD3-204ENST00000542032 C9orf172C9J069 976 aa7.09□□□□□ -1.27
LEMD3-204ENST00000542032 ICMTO60725 284 aa7.09□□□□□ -1.27
LEMD3-204ENST00000542032 DEAF1O75398 565 aaPredicted RBP7.09□□□□□ -1.27
LEMD3-204ENST00000542032 PCSK2P16519 638 aa7.09□□□□□ -1.27
LEMD3-204ENST00000542032 ZNF211Q13398 564 aaPredicted RBP7.09□□□□□ -1.27
LEMD3-204ENST00000542032 GJD3Q8N144 294 aa7.09□□□□□ -1.27
LEMD3-204ENST00000542032 KRTAP9-8Q9BYQ0 159 aa7.09□□□□□ -1.27
LEMD3-204ENST00000542032 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.09□□□□□ -1.27
LEMD3-204ENST00000542032 SERPINB4P48594 390 aa7.08□□□□□ -1.28
LEMD3-204ENST00000542032 SHISA2Q6UWI4 295 aa7.08□□□□□ -1.28
LEMD3-204ENST00000542032 ADAMTSL4Q6UY14 1074 aa7.08□□□□□ -1.28
LEMD3-204ENST00000542032 C1orf127Q8N9H9 656 aa7.08□□□□□ -1.28
LEMD3-204ENST00000542032 ANO2Q9NQ90 1003 aa7.08□□□□□ -1.28
LEMD3-204ENST00000542032 TRIM33Q9UPN9 1127 aa7.08□□□□□ -1.28
LEMD3-204ENST00000542032 NFKBIEO00221 500 aa7.07□□□□□ -1.28
LEMD3-204ENST00000542032 ABL1P00519 1130 aa7.07□□□□□ -1.28
LEMD3-204ENST00000542032 USP5P45974 858 aa7.07□□□□□ -1.28
LEMD3-204ENST00000542032 ATP11AP98196 1134 aa7.07□□□□□ -1.28
LEMD3-204ENST00000542032 EHHADHQ08426 723 aa7.07□□□□□ -1.28
LEMD3-204ENST00000542032 PDE4CQ08493 712 aa7.07□□□□□ -1.28
LEMD3-204ENST00000542032 RASSF4Q9H2L5 321 aa7.07□□□□□ -1.28
LEMD3-204ENST00000542032 SRA1Q9HD15 236 aaKnown RBP7.07□□□□□ -1.28
LEMD3-204ENST00000542032 CCDC87Q9NVE4 849 aa7.07□□□□□ -1.28
LEMD3-204ENST00000542032 DLL1O00548 723 aa7.06□□□□□ -1.28
LEMD3-204ENST00000542032 TM4SF5O14894 197 aa7.06□□□□□ -1.28
LEMD3-204ENST00000542032 ARHGAP4P98171 946 aa7.06□□□□□ -1.28
LEMD3-204ENST00000542032 NRG1Q02297 640 aaPredicted RBP7.06□□□□□ -1.28
LEMD3-204ENST00000542032 C8orf34Q49A92 452 aa7.06□□□□□ -1.28
LEMD3-204ENST00000542032 GDF6Q6KF10 455 aaPredicted RBP7.06□□□□□ -1.28
LEMD3-204ENST00000542032 SPACA7Q96KW9 195 aa7.06□□□□□ -1.28
LEMD3-204ENST00000542032 PBX4Q9BYU1 374 aa7.06□□□□□ -1.28
LEMD3-204ENST00000542032 KANSL3Q9P2N6 904 aa7.06□□□□□ -1.28
LEMD3-204ENST00000542032 TNFRSF21O75509 655 aa7.05□□□□□ -1.28
LEMD3-204ENST00000542032 SETDB1Q15047 1291 aa7.05□□□□□ -1.28
LEMD3-204ENST00000542032 IGF2-ASQ6U949 168 aa7.05□□□□□ -1.28
LEMD3-204ENST00000542032 IL22RA1Q8N6P7 574 aa7.05□□□□□ -1.28
LEMD3-204ENST00000542032 PMEPA1Q969W9 287 aa7.05□□□□□ -1.28
LEMD3-204ENST00000542032 SMNDC1O75940 238 aaKnown RBP eCLIP7.04□□□□□ -1.28
LEMD3-204ENST00000542032 CES1P23141 567 aa7.04□□□□□ -1.28
LEMD3-204ENST00000542032 GP2P55259 537 aaKnown RBP7.04□□□□□ -1.28
LEMD3-204ENST00000542032 CEP135Q66GS9 1140 aa7.04□□□□□ -1.28
LEMD3-204ENST00000542032 NCAPG2Q86XI2 1143 aa7.04□□□□□ -1.28
LEMD3-204ENST00000542032 MAP4K3Q8IVH8 894 aa7.04□□□□□ -1.28
LEMD3-204ENST00000542032 POP1Q99575 1024 aaKnown RBP7.04□□□□□ -1.28
LEMD3-204ENST00000542032 SSBP4Q9BWG4 385 aaPredicted RBP7.04□□□□□ -1.28
LEMD3-204ENST00000542032 ADAM19Q9H013 955 aa7.04□□□□□ -1.28
LEMD3-204ENST00000542032 MUC3BQ9H195 1237 aa7.04□□□□□ -1.28
LEMD3-204ENST00000542032 DZANK1Q9NVP4 752 aa7.04□□□□□ -1.28
LEMD3-204ENST00000542032 H3BRB1 525 aa7.03□□□□□ -1.28
LEMD3-204ENST00000542032 TTC16Q8NEE8 873 aa7.03□□□□□ -1.28
LEMD3-204ENST00000542032 SNX29Q8TEQ0 813 aa7.03□□□□□ -1.28
LEMD3-204ENST00000542032 TUT1Q9H6E5 874 aaKnown RBP7.03□□□□□ -1.28
LEMD3-204ENST00000542032 PPME1Q9Y570 386 aa7.03□□□□□ -1.28
LEMD3-204ENST00000542032 EREGO14944 169 aa7.02□□□□□ -1.29
LEMD3-204ENST00000542032 IGHA2P01877 340 aa7.02□□□□□ -1.29
LEMD3-204ENST00000542032 ACPPP15309 386 aa7.02□□□□□ -1.29
LEMD3-204ENST00000542032 AAMPQ13685 434 aa7.02□□□□□ -1.29
LEMD3-204ENST00000542032 GLYCTKQ8IVS8 523 aa7.02□□□□□ -1.29
LEMD3-204ENST00000542032 FOXD3Q9UJU5 478 aaPredicted RBP7.02□□□□□ -1.29
LEMD3-204ENST00000542032 GNEQ9Y223 722 aaKnown RBP7.02□□□□□ -1.29
LEMD3-204ENST00000542032 CDC27P30260 824 aa7.01□□□□□ -1.29
LEMD3-204ENST00000542032 TMEM130Q8N3G9 435 aa7.01□□□□□ -1.29
LEMD3-204ENST00000542032 TMEM102Q8N9M5 508 aaPredicted RBP7.01□□□□□ -1.29
LEMD3-204ENST00000542032 FAM129BQ96TA1 746 aa7.01□□□□□ -1.29
LEMD3-204ENST00000542032 LACRTQ9GZZ8 138 aa7.01□□□□□ -1.29
LEMD3-204ENST00000542032 ZFYVE28Q9HCC9 887 aa7.01□□□□□ -1.29
LEMD3-204ENST00000542032 PHACTR2O75167 634 aa7□□□□□ -1.29
LEMD3-204ENST00000542032 BRD1O95696 1058 aa7□□□□□ -1.29
LEMD3-204ENST00000542032 PTPRAP18433 802 aa7□□□□□ -1.29
LEMD3-204ENST00000542032 EPHA1P21709 976 aa7□□□□□ -1.29
LEMD3-204ENST00000542032 NOS3P29474 1203 aa7□□□□□ -1.29
LEMD3-204ENST00000542032 CD97P48960 835 aa7□□□□□ -1.29
LEMD3-204ENST00000542032 LCE5AQ5TCM9 118 aa7□□□□□ -1.29
LEMD3-204ENST00000542032 GALNT11Q8NCW6 608 aa7□□□□□ -1.29
LEMD3-204ENST00000542032 WFDC12Q8WWY7 111 aa7□□□□□ -1.29
LEMD3-204ENST00000542032 HHIPQ96QV1 700 aa7□□□□□ -1.29
LEMD3-204ENST00000542032 USP21Q9UK80 565 aa7□□□□□ -1.29
LEMD3-204ENST00000542032 LINC01387J3KSC0 135 aa6.99□□□□□ -1.29
LEMD3-204ENST00000542032 PEAR1Q5VY43 1037 aaPredicted RBP6.99□□□□□ -1.29
LEMD3-204ENST00000542032 Q6ZS46 218 aa6.99□□□□□ -1.29
LEMD3-204ENST00000542032 DCAF11Q8TEB1 546 aa6.99□□□□□ -1.29
LEMD3-204ENST00000542032 NXPE3Q969Y0 559 aa6.99□□□□□ -1.29
LEMD3-204ENST00000542032 CITED4Q96RK1 184 aa6.99□□□□□ -1.29
LEMD3-204ENST00000542032 ZKSCAN3Q9BRR0 538 aa6.99□□□□□ -1.29
LEMD3-204ENST00000542032 MRPL18Q9H0U6 180 aaKnown RBP6.99□□□□□ -1.29
LEMD3-204ENST00000542032 BRPF3Q9ULD4 1205 aa6.99□□□□□ -1.29
LEMD3-204ENST00000542032 SOX13Q9UN79 622 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms