RNA–Protein interactions for RNA: ENST00000538910.1

LPCAT3-207, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-207ENST00000538910 PRAMEF18Q5VWM3 479 aa25.7■■□□□ 1.7
LPCAT3-207ENST00000538910 GREM2Q9H772 168 aa25.7■■□□□ 1.7
LPCAT3-207ENST00000538910 PRKRIP1Q9H875 184 aaPredicted RBP25.7■■□□□ 1.7
LPCAT3-207ENST00000538910 AKAP11Q9UKA4 1901 aa25.7■■□□□ 1.7
LPCAT3-207ENST00000538910 PAPPA2Q9BXP8 1791 aa25.69■■□□□ 1.7
LPCAT3-207ENST00000538910 PI4KAP2A4QPH2 592 aa25.69■■□□□ 1.7
LPCAT3-207ENST00000538910 CCT4P50991 539 aaKnown RBP25.69■■□□□ 1.7
LPCAT3-207ENST00000538910 STRIP1Q5VSL9 837 aa25.69■■□□□ 1.7
LPCAT3-207ENST00000538910 OGFOD1Q8N543 542 aa25.69■■□□□ 1.7
LPCAT3-207ENST00000538910 TSPYL6Q8N831 410 aa25.69■■□□□ 1.7
LPCAT3-207ENST00000538910 PI4KAP1Q8N8J0 262 aa25.69■■□□□ 1.7
LPCAT3-207ENST00000538910 MXD3Q9BW11 206 aa25.69■■□□□ 1.7
LPCAT3-207ENST00000538910 WNT10BO00744 389 aa25.68■■□□□ 1.7
LPCAT3-207ENST00000538910 COA1Q9GZY4 146 aa25.68■■□□□ 1.7
LPCAT3-207ENST00000538910 PSME4Q14997 1843 aa25.67■■□□□ 1.7
LPCAT3-207ENST00000538910 MYO3BQ8WXR4 1341 aa25.67■■□□□ 1.7
LPCAT3-207ENST00000538910 TM4SF4P48230 202 aa25.67■■□□□ 1.7
LPCAT3-207ENST00000538910 MMP14P50281 582 aa25.67■■□□□ 1.7
LPCAT3-207ENST00000538910 PKN2Q16513 984 aaKnown RBP25.67■■□□□ 1.7
LPCAT3-207ENST00000538910 PDE4DIPQ5VU43 2346 aa25.66■■□□□ 1.7
LPCAT3-207ENST00000538910 LEMD3Q9Y2U8 911 aa25.66■■□□□ 1.7
LPCAT3-207ENST00000538910 TBC1D8O95759 1140 aa25.65■■□□□ 1.7
LPCAT3-207ENST00000538910 NEXNQ0ZGT2 675 aa25.65■■□□□ 1.7
LPCAT3-207ENST00000538910 TXNRD3Q86VQ6 643 aa25.65■■□□□ 1.7
LPCAT3-207ENST00000538910 ZNF296Q8WUU4 475 aaPredicted RBP25.65■■□□□ 1.7
LPCAT3-207ENST00000538910 PCDH10Q9P2E7 1040 aa25.65■■□□□ 1.7
LPCAT3-207ENST00000538910 HPS5Q9UPZ3 1129 aa25.65■■□□□ 1.7
LPCAT3-207ENST00000538910 NEURL1BA8MQ27 555 aa25.64■■□□□ 1.7
LPCAT3-207ENST00000538910 H7C1W4 665 aa25.64■■□□□ 1.7
LPCAT3-207ENST00000538910 TTLL12Q14166 644 aaPredicted RBP25.64■■□□□ 1.7
LPCAT3-207ENST00000538910 CWF19L2Q2TBE0 894 aaKnown RBP25.64■■□□□ 1.7
LPCAT3-207ENST00000538910 HDAC9Q9UKV0 1011 aa25.64■■□□□ 1.7
LPCAT3-207ENST00000538910 NF2P35240 595 aa25.63■■□□□ 1.69
LPCAT3-207ENST00000538910 NOM1Q5C9Z4 860 aaKnown RBP25.63■■□□□ 1.69
LPCAT3-207ENST00000538910 FBXW7Q969H0 707 aa25.63■■□□□ 1.69
LPCAT3-207ENST00000538910 IGHMBP2P38935 993 aaKnown RBP25.62■■□□□ 1.69
LPCAT3-207ENST00000538910 TTLL5Q6EMB2 1281 aa25.62■■□□□ 1.69
LPCAT3-207ENST00000538910 STK31Q9BXU1 1019 aa25.62■■□□□ 1.69
LPCAT3-207ENST00000538910 GPR25O00155 361 aa25.61■■□□□ 1.69
LPCAT3-207ENST00000538910 PLA2G12BQ9BX93 195 aa25.61■■□□□ 1.69
LPCAT3-207ENST00000538910 ZNF804BA4D1E1 1349 aa25.61■■□□□ 1.69
LPCAT3-207ENST00000538910 SASH1O94885 1247 aa25.6■■□□□ 1.69
LPCAT3-207ENST00000538910 PTPN12Q05209 780 aaKnown RBP25.6■■□□□ 1.69
LPCAT3-207ENST00000538910 UBE3BQ7Z3V4 1068 aa25.6■■□□□ 1.69
LPCAT3-207ENST00000538910 ZBED3Q96IU2 234 aaPredicted RBP25.6■■□□□ 1.69
LPCAT3-207ENST00000538910 ANKRD2Q9GZV1 360 aa25.6■■□□□ 1.69
LPCAT3-207ENST00000538910 G2E3Q7L622 706 aa25.59■■□□□ 1.69
LPCAT3-207ENST00000538910 ARMC9Q7Z3E5 817 aa25.59■■□□□ 1.69
LPCAT3-207ENST00000538910 APOBEC3FQ8IUX4 373 aaKnown RBP25.59■■□□□ 1.69
LPCAT3-207ENST00000538910 TSR2Q969E8 191 aaKnown RBP25.59■■□□□ 1.69
LPCAT3-207ENST00000538910 CFHR5Q9BXR6 569 aa25.59■■□□□ 1.69
LPCAT3-207ENST00000538910 ITGA6P23229 1130 aa25.58■■□□□ 1.69
LPCAT3-207ENST00000538910 KLRK1P26718 216 aa25.58■■□□□ 1.69
LPCAT3-207ENST00000538910 SREBF2Q12772 1141 aa25.58■■□□□ 1.69
LPCAT3-207ENST00000538910 MKRN3Q13064 507 aaKnown RBP25.58■■□□□ 1.69
LPCAT3-207ENST00000538910 LDLRAD1Q5T700 205 aa25.58■■□□□ 1.69
LPCAT3-207ENST00000538910 KIAA0825Q8IV33 1275 aa25.58■■□□□ 1.69
LPCAT3-207ENST00000538910 SLC4A2P04920 1241 aa25.57■■□□□ 1.68
LPCAT3-207ENST00000538910 CSF1RP07333 972 aa25.57■■□□□ 1.68
LPCAT3-207ENST00000538910 GCKRQ14397 625 aa25.57■■□□□ 1.68
LPCAT3-207ENST00000538910 MPHOSPH8Q99549 860 aa25.57■■□□□ 1.68
LPCAT3-207ENST00000538910 CASP7P55210 303 aa25.56■■□□□ 1.68
LPCAT3-207ENST00000538910 GTF2IP78347 998 aa25.56■■□□□ 1.68
LPCAT3-207ENST00000538910 PRKG1Q13976 671 aa25.55■■□□□ 1.68
LPCAT3-207ENST00000538910 TWISTNBQ3B726 338 aaPredicted RBP25.55■■□□□ 1.68
LPCAT3-207ENST00000538910 PRPF38BQ5VTL8 546 aaKnown RBP25.55■■□□□ 1.68
LPCAT3-207ENST00000538910 FBXO46Q6PJ61 603 aaPredicted RBP25.55■■□□□ 1.68
LPCAT3-207ENST00000538910 CCDC27Q2M243 656 aa25.54■■□□□ 1.68
LPCAT3-207ENST00000538910 SPRYD7Q5W111 196 aa25.54■■□□□ 1.68
LPCAT3-207ENST00000538910 R3HDMLQ9H3Y0 253 aa25.54■■□□□ 1.68
LPCAT3-207ENST00000538910 CD209Q9NNX6 404 aa25.54■■□□□ 1.68
LPCAT3-207ENST00000538910 FKTNO75072 461 aa25.53■■□□□ 1.68
LPCAT3-207ENST00000538910 CHRNDQ07001 517 aa25.53■■□□□ 1.68
LPCAT3-207ENST00000538910 DEFB129Q9H1M3 183 aa25.53■■□□□ 1.68
LPCAT3-207ENST00000538910 ANGEL1Q9UNK9 670 aaKnown RBP25.53■■□□□ 1.68
LPCAT3-207ENST00000538910 ZNF646O15015 1829 aaPredicted RBP25.53■■□□□ 1.68
LPCAT3-207ENST00000538910 KCNJ4P48050 445 aa25.52■■□□□ 1.68
LPCAT3-207ENST00000538910 WWC1Q8IX03 1113 aa25.52■■□□□ 1.68
LPCAT3-207ENST00000538910 MYH3P11055 1940 aa25.51■■□□□ 1.67
LPCAT3-207ENST00000538910 ALDH1A1P00352 501 aa25.51■■□□□ 1.67
LPCAT3-207ENST00000538910 INHBEP58166 350 aa25.51■■□□□ 1.67
LPCAT3-207ENST00000538910 FLIIQ13045 1269 aa25.51■■□□□ 1.67
LPCAT3-207ENST00000538910 DLGAP5Q15398 846 aa25.51■■□□□ 1.67
LPCAT3-207ENST00000538910 MAP3K11Q16584 847 aa25.51■■□□□ 1.67
LPCAT3-207ENST00000538910 C15orf52Q6ZUT6 534 aaKnown RBP25.51■■□□□ 1.67
LPCAT3-207ENST00000538910 MTMR14Q8NCE2 650 aa25.51■■□□□ 1.67
LPCAT3-207ENST00000538910 MYH16Q9H6N6 1097 aa25.51■■□□□ 1.67
LPCAT3-207ENST00000538910 CERS5Q8N5B7 392 aa25.5■■□□□ 1.67
LPCAT3-207ENST00000538910 LINS1Q8NG48 757 aa25.5■■□□□ 1.67
LPCAT3-207ENST00000538910 DNAAF4Q8WXU2 420 aa25.5■■□□□ 1.67
LPCAT3-207ENST00000538910 SLC10A4Q96EP9 437 aa25.5■■□□□ 1.67
LPCAT3-207ENST00000538910 IRS2Q9Y4H2 1338 aa25.5■■□□□ 1.67
LPCAT3-207ENST00000538910 ANKRD18BA2A2Z9 1011 aa25.49■■□□□ 1.67
LPCAT3-207ENST00000538910 SNAP23O00161 211 aa25.49■■□□□ 1.67
LPCAT3-207ENST00000538910 FZD1Q9UP38 647 aa25.49■■□□□ 1.67
LPCAT3-207ENST00000538910 COL1A1P02452 1464 aaPredicted RBP25.48■■□□□ 1.67
LPCAT3-207ENST00000538910 MANSC4A6NHS7 340 aaPredicted RBP25.48■■□□□ 1.67
LPCAT3-207ENST00000538910 SPEF2Q9C093 1822 aa25.47■■□□□ 1.67
LPCAT3-207ENST00000538910 IL16Q14005 1332 aa25.47■■□□□ 1.67
LPCAT3-207ENST00000538910 PPP1R12BO60237 982 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms