RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 PRNPP04156 253 aa4.7□□□□□ -1.66
CBX3P4-201ENST00000538909 EPHA1P21709 976 aa4.7□□□□□ -1.66
CBX3P4-201ENST00000538909 NLRP12P59046 1061 aa4.7□□□□□ -1.66
CBX3P4-201ENST00000538909 KLHL23Q8NBE8 558 aa4.7□□□□□ -1.66
CBX3P4-201ENST00000538909 KRTAP9-7A8MTY7 169 aa4.69□□□□□ -1.66
CBX3P4-201ENST00000538909 HDGFL1Q5TGJ6 251 aa4.69□□□□□ -1.66
CBX3P4-201ENST00000538909 POM121Q96HA1 1249 aa4.69□□□□□ -1.66
CBX3P4-201ENST00000538909 SPACA7Q96KW9 195 aa4.69□□□□□ -1.66
CBX3P4-201ENST00000538909 RUSC1Q9BVN2 902 aa4.69□□□□□ -1.66
CBX3P4-201ENST00000538909 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
CBX3P4-201ENST00000538909 RASSF4Q9H2L5 321 aa4.69□□□□□ -1.66
CBX3P4-201ENST00000538909 SEC31BQ9NQW1 1179 aa4.69□□□□□ -1.66
CBX3P4-201ENST00000538909 HIF3AQ9Y2N7 669 aa4.69□□□□□ -1.66
CBX3P4-201ENST00000538909 PAPLNO95428 1278 aa4.68□□□□□ -1.66
CBX3P4-201ENST00000538909 DPYDQ12882 1025 aa4.68□□□□□ -1.66
CBX3P4-201ENST00000538909 HYAL2Q12891 473 aa4.68□□□□□ -1.66
CBX3P4-201ENST00000538909 NLRP13Q86W25 1043 aa4.68□□□□□ -1.66
CBX3P4-201ENST00000538909 RNF208Q9H0X6 261 aa4.68□□□□□ -1.66
CBX3P4-201ENST00000538909 LRFN2Q9ULH4 789 aa4.68□□□□□ -1.66
CBX3P4-201ENST00000538909 FAM177BA6PVY3 158 aa4.67□□□□□ -1.66
CBX3P4-201ENST00000538909 CYP26A1O43174 497 aa4.67□□□□□ -1.66
CBX3P4-201ENST00000538909 SCNN1AP37088 669 aa4.67□□□□□ -1.66
CBX3P4-201ENST00000538909 TRIP4Q15650 581 aaPredicted RBP4.67□□□□□ -1.66
CBX3P4-201ENST00000538909 NFKBIBQ15653 356 aa4.67□□□□□ -1.66
CBX3P4-201ENST00000538909 PKN1Q16512 942 aa4.67□□□□□ -1.66
CBX3P4-201ENST00000538909 LARP1Q6PKG0 1096 aaKnown RBP4.67□□□□□ -1.66
CBX3P4-201ENST00000538909 PAK6Q9NQU5 681 aaPredicted RBP4.67□□□□□ -1.66
CBX3P4-201ENST00000538909 BSDC1Q9NW68 430 aaPredicted RBP4.67□□□□□ -1.66
CBX3P4-201ENST00000538909 UBAP1LF5GYI3 381 aa4.66□□□□□ -1.66
CBX3P4-201ENST00000538909 ZNF865P0CJ78 1059 aaPredicted RBP4.66□□□□□ -1.66
CBX3P4-201ENST00000538909 PTPRAP18433 802 aa4.66□□□□□ -1.66
CBX3P4-201ENST00000538909 CRTC2Q53ET0 693 aaPredicted RBP4.66□□□□□ -1.66
CBX3P4-201ENST00000538909 AGBL5Q8NDL9 886 aa4.66□□□□□ -1.66
CBX3P4-201ENST00000538909 OR13H1Q8NG92 308 aa4.66□□□□□ -1.66
CBX3P4-201ENST00000538909 SLC7A3Q8WY07 619 aa4.66□□□□□ -1.66
CBX3P4-201ENST00000538909 MYO19Q96H55 970 aa4.66□□□□□ -1.66
CBX3P4-201ENST00000538909 ZMYND15Q9H091 742 aa4.66□□□□□ -1.66
CBX3P4-201ENST00000538909 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.66□□□□□ -1.66
CBX3P4-201ENST00000538909 FAM95CA0A1B0GW59 222 aa4.65□□□□□ -1.67
CBX3P4-201ENST00000538909 CPSF6Q16630 551 aaKnown RBP eCLIP4.65□□□□□ -1.67
CBX3P4-201ENST00000538909 TMEM132AQ24JP5 1023 aa4.65□□□□□ -1.67
CBX3P4-201ENST00000538909 PAOXQ6QHF9 649 aa4.65□□□□□ -1.67
CBX3P4-201ENST00000538909 C12orf50Q8NA57 414 aaPredicted RBP4.65□□□□□ -1.67
CBX3P4-201ENST00000538909 LRRC4CQ9HCJ2 640 aa4.65□□□□□ -1.67
CBX3P4-201ENST00000538909 CARMIL2Q6F5E8 1435 aa4.64□□□□□ -1.67
CBX3P4-201ENST00000538909 H3BRJ5 948 aa4.64□□□□□ -1.67
CBX3P4-201ENST00000538909 FOXO3O43524 673 aa4.64□□□□□ -1.67
CBX3P4-201ENST00000538909 FARP2O94887 1054 aaPredicted RBP4.64□□□□□ -1.67
CBX3P4-201ENST00000538909 ADMP35318 185 aa4.64□□□□□ -1.67
CBX3P4-201ENST00000538909 PIP4K2BP78356 416 aa4.64□□□□□ -1.67
CBX3P4-201ENST00000538909 TTC39BQ5VTQ0 682 aaPredicted RBP4.64□□□□□ -1.67
CBX3P4-201ENST00000538909 KSR1Q8IVT5 923 aa4.64□□□□□ -1.67
CBX3P4-201ENST00000538909 FBLIM1Q8WUP2 373 aa4.64□□□□□ -1.67
CBX3P4-201ENST00000538909 TBC1D32Q96NH3 1257 aa4.64□□□□□ -1.67
CBX3P4-201ENST00000538909 METTL22Q9BUU2 404 aaPredicted RBP4.64□□□□□ -1.67
CBX3P4-201ENST00000538909 PBX4Q9BYU1 374 aa4.64□□□□□ -1.67
CBX3P4-201ENST00000538909 FAM170BA6NMN3 283 aa4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 CYP2E1P05181 493 aaPredicted RBP4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 USP11P51784 963 aa4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 CABP4P57796 275 aa4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 PTK7Q13308 1070 aa4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 PLCL1Q15111 1095 aa4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 COX20Q5RI15 118 aa4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 NUTM2GQ5VZR2 741 aa4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 HGSNATQ68CP4 663 aa4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 ZNF574Q6ZN55 896 aaPredicted RBP4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 NCAPG2Q86XI2 1143 aa4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 ANKMY2Q8IV38 441 aa4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 ETFBKMTQ8IXQ9 262 aa4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 POP1Q99575 1024 aaKnown RBP4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 TFIP11Q9UBB9 837 aaKnown RBP4.63□□□□□ -1.67
CBX3P4-201ENST00000538909 A6NJR5 290 aa4.62□□□□□ -1.67
CBX3P4-201ENST00000538909 BIN1O00499 593 aa4.62□□□□□ -1.67
CBX3P4-201ENST00000538909 RAD21O60216 631 aa4.62□□□□□ -1.67
CBX3P4-201ENST00000538909 DRD2P14416 443 aa4.62□□□□□ -1.67
CBX3P4-201ENST00000538909 WEE1P30291 646 aa4.62□□□□□ -1.67
CBX3P4-201ENST00000538909 ZNF792Q3KQV3 632 aa4.62□□□□□ -1.67
CBX3P4-201ENST00000538909 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
CBX3P4-201ENST00000538909 CDPF1Q6NVV7 123 aa4.62□□□□□ -1.67
CBX3P4-201ENST00000538909 USP26Q9BXU7 913 aa4.62□□□□□ -1.67
CBX3P4-201ENST00000538909 ADAM19Q9H013 955 aa4.62□□□□□ -1.67
CBX3P4-201ENST00000538909 ZC3H7BQ9UGR2 993 aaKnown RBP4.62□□□□□ -1.67
CBX3P4-201ENST00000538909 MAFBQ9Y5Q3 323 aaPredicted RBP4.62□□□□□ -1.67
CBX3P4-201ENST00000538909 USP17L15C9J2P7 530 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 USP17L10C9JJH3 530 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 USP17L13C9JLJ4 530 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 USP17L12C9JPN9 530 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 USP17L11C9JVI0 530 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 USP17L21D6R901 530 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 USP17L18D6R9N7 530 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 USP17L22D6RA61 530 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 USP17L17D6RBQ6 530 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 USP17L19D6RCP7 530 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 USP17L20D6RJB6 530 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 USP17L24Q0WX57 530 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 ZAR1Q86SH2 424 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 PIK3R5Q8WYR1 880 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 FAM168AQ92567 244 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 WNT8BQ93098 351 aa4.61□□□□□ -1.67
CBX3P4-201ENST00000538909 OSGEPQ9NPF4 335 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms