RNA–Protein interactions for RNA: ENST00000537745.5

RAN-208, Transcript of RAN, member RAS oncogene family, human

TSL 1 (best)

Gene RAN, Length 1,065 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAN-208	ENST00000537745	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.83	□□□□□ -0.2
RAN-208	ENST00000537745	SCARF1	Q14162	830 aa		13.82	□□□□□ -0.2
RAN-208	ENST00000537745	PKN2	Q16513	984 aa	Known RBP	13.82	□□□□□ -0.2
RAN-208	ENST00000537745	RTL5	Q5HYW3	569 aa	Predicted RBP	13.82	□□□□□ -0.2
RAN-208	ENST00000537745	EYA3	Q99504	573 aa		13.82	□□□□□ -0.2
RAN-208	ENST00000537745	OCEL1	Q9H607	264 aa		13.82	□□□□□ -0.2
RAN-208	ENST00000537745	MKRN3	Q13064	507 aa	Known RBP	13.81	□□□□□ -0.2
RAN-208	ENST00000537745	FAM89A	Q96GI7	184 aa		13.81	□□□□□ -0.2
RAN-208	ENST00000537745	LRRC37A	A6NMS7	1700 aa		13.81	□□□□□ -0.2
RAN-208	ENST00000537745	UBE2Q2L	H0YL09	131 aa		13.8	□□□□□ -0.2
RAN-208	ENST00000537745	VIL1	P09327	827 aa	Known RBP	13.8	□□□□□ -0.2
RAN-208	ENST00000537745	TTLL12	Q14166	644 aa	Predicted RBP	13.8	□□□□□ -0.2
RAN-208	ENST00000537745	PRAMEF18	Q5VWM3	479 aa		13.8	□□□□□ -0.2
RAN-208	ENST00000537745	TBC1D16	Q8TBP0	767 aa		13.8	□□□□□ -0.2
RAN-208	ENST00000537745	PLEKHF1	Q96S99	279 aa		13.8	□□□□□ -0.2
RAN-208	ENST00000537745	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.8	□□□□□ -0.2
RAN-208	ENST00000537745	MAPK8IP3	Q9UPT6	1336 aa		13.8	□□□□□ -0.2
RAN-208	ENST00000537745	ATP5J2-PTCD1	G3V325	749 aa		13.79	□□□□□ -0.2
RAN-208	ENST00000537745	GCC1	Q96CN9	775 aa		13.79	□□□□□ -0.2
RAN-208	ENST00000537745	COL4A1	P02462	1669 aa		13.79	□□□□□ -0.2
RAN-208	ENST00000537745	SCN9A	Q15858	1988 aa		13.78	□□□□□ -0.2
RAN-208	ENST00000537745	GPR25	O00155	361 aa		13.78	□□□□□ -0.2
RAN-208	ENST00000537745	UFL1	O94874	794 aa		13.78	□□□□□ -0.2
RAN-208	ENST00000537745	PDCD7	Q8N8D1	485 aa	Known RBP	13.78	□□□□□ -0.2
RAN-208	ENST00000537745	ANKIB1	Q9P2G1	1089 aa		13.78	□□□□□ -0.2
RAN-208	ENST00000537745	DDX60	Q8IY21	1712 aa	Known RBP	13.78	□□□□□ -0.2
RAN-208	ENST00000537745	RPS8	P62241	208 aa	Known RBP	13.77	□□□□□ -0.21
RAN-208	ENST00000537745	FKBP1B	P68106	108 aa		13.77	□□□□□ -0.21
RAN-208	ENST00000537745	SF3B3	Q15393	1217 aa	Known RBP	13.77	□□□□□ -0.21
RAN-208	ENST00000537745	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.77	□□□□□ -0.21
RAN-208	ENST00000537745	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.77	□□□□□ -0.21
RAN-208	ENST00000537745	MYOZ2	Q9NPC6	264 aa		13.77	□□□□□ -0.21
RAN-208	ENST00000537745	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.77	□□□□□ -0.21
RAN-208	ENST00000537745	PAPPA2	Q9BXP8	1791 aa		13.76	□□□□□ -0.21
RAN-208	ENST00000537745	MKI67	P46013	3256 aa	Known RBP	13.76	□□□□□ -0.21
RAN-208	ENST00000537745	RIPK4	P57078	832 aa		13.76	□□□□□ -0.21
RAN-208	ENST00000537745	ZNF280A	P59817	542 aa	Predicted RBP	13.76	□□□□□ -0.21
RAN-208	ENST00000537745	KRT24	Q2M2I5	525 aa		13.76	□□□□□ -0.21
RAN-208	ENST00000537745	HABP4	Q5JVS0	413 aa	Known RBP	13.76	□□□□□ -0.21
RAN-208	ENST00000537745	CHPF2	Q9P2E5	772 aa		13.76	□□□□□ -0.21
RAN-208	ENST00000537745	IRS4	O14654	1257 aa	Predicted RBP	13.75	□□□□□ -0.21
RAN-208	ENST00000537745	FKTN	O75072	461 aa		13.75	□□□□□ -0.21
RAN-208	ENST00000537745	USP17L8	P0C7I0	530 aa		13.75	□□□□□ -0.21
RAN-208	ENST00000537745	PRKG1	Q13976	671 aa		13.75	□□□□□ -0.21
RAN-208	ENST00000537745	AGBL3	Q8NEM8	1001 aa		13.75	□□□□□ -0.21
RAN-208	ENST00000537745	R3HDML	Q9H3Y0	253 aa		13.75	□□□□□ -0.21
RAN-208	ENST00000537745	SEC31B	Q9NQW1	1179 aa		13.75	□□□□□ -0.21
RAN-208	ENST00000537745	GGA1	Q9UJY5	639 aa		13.75	□□□□□ -0.21
RAN-208	ENST00000537745	TM4SF4	P48230	202 aa		13.74	□□□□□ -0.21
RAN-208	ENST00000537745	NBPF9	Q3BBW0	867 aa		13.74	□□□□□ -0.21
RAN-208	ENST00000537745	ANKRD13D	Q6ZTN6	518 aa		13.74	□□□□□ -0.21
RAN-208	ENST00000537745	PLBD2	Q8NHP8	589 aa		13.74	□□□□□ -0.21
RAN-208	ENST00000537745	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.74	□□□□□ -0.21
RAN-208	ENST00000537745	ISCA1	Q9BUE6	129 aa		13.74	□□□□□ -0.21
RAN-208	ENST00000537745	PNN	Q9H307	717 aa	Known RBP	13.74	□□□□□ -0.21
RAN-208	ENST00000537745	LAS1L	Q9Y4W2	734 aa	Known RBP	13.74	□□□□□ -0.21
RAN-208	ENST00000537745	PITPNM2	Q9BZ72	1349 aa		13.73	□□□□□ -0.21
RAN-208	ENST00000537745	SREBF2	Q12772	1141 aa		13.73	□□□□□ -0.21
RAN-208	ENST00000537745	FBXW7	Q969H0	707 aa		13.73	□□□□□ -0.21
RAN-208	ENST00000537745	PODXL2	Q9NZ53	605 aa		13.73	□□□□□ -0.21
RAN-208	ENST00000537745	NF2	P35240	595 aa		13.72	□□□□□ -0.21
RAN-208	ENST00000537745	HDGFL1	Q5TGJ6	251 aa		13.72	□□□□□ -0.21
RAN-208	ENST00000537745	GML	Q99445	158 aa		13.72	□□□□□ -0.21
RAN-208	ENST00000537745	MXD3	Q9BW11	206 aa		13.72	□□□□□ -0.21
RAN-208	ENST00000537745	TRIM17	Q9Y577	477 aa		13.72	□□□□□ -0.21
RAN-208	ENST00000537745	CENPF	P49454	3210 aa		13.71	□□□□□ -0.21
RAN-208	ENST00000537745	USP17L3	A6NCW0	530 aa		13.71	□□□□□ -0.21
RAN-208	ENST00000537745	USP17L4	A6NCW7	530 aa		13.71	□□□□□ -0.21
RAN-208	ENST00000537745	PTPN12	Q05209	780 aa	Known RBP	13.71	□□□□□ -0.21
RAN-208	ENST00000537745	NEUROD2	Q15784	382 aa		13.71	□□□□□ -0.21
RAN-208	ENST00000537745	USP17L1	Q7RTZ2	530 aa		13.71	□□□□□ -0.21
RAN-208	ENST00000537745	JARID2	Q92833	1246 aa	Predicted RBP	13.71	□□□□□ -0.21
RAN-208	ENST00000537745	BABAM1	Q9NWV8	329 aa		13.71	□□□□□ -0.21
RAN-208	ENST00000537745	HTT	P42858	3142 aa		13.71	□□□□□ -0.21
RAN-208	ENST00000537745	NOM1	Q5C9Z4	860 aa	Known RBP	13.7	□□□□□ -0.22
RAN-208	ENST00000537745	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.7	□□□□□ -0.22
RAN-208	ENST00000537745	FZD1	Q9UP38	647 aa		13.7	□□□□□ -0.22
RAN-208	ENST00000537745	WTIP	A6NIX2	430 aa	Predicted RBP	13.69	□□□□□ -0.22
RAN-208	ENST00000537745	SASH1	O94885	1247 aa		13.69	□□□□□ -0.22
RAN-208	ENST00000537745	ARMC9	Q7Z3E5	817 aa		13.69	□□□□□ -0.22
RAN-208	ENST00000537745	WNT10B	O00744	389 aa		13.68	□□□□□ -0.22
RAN-208	ENST00000537745	TMPO	P42166	694 aa	Known RBP	13.68	□□□□□ -0.22
RAN-208	ENST00000537745	LMOD3	Q0VAK6	560 aa		13.68	□□□□□ -0.22
RAN-208	ENST00000537745	CCDC152	Q4G0S7	254 aa		13.68	□□□□□ -0.22
RAN-208	ENST00000537745	OTOP1	Q7RTM1	612 aa		13.68	□□□□□ -0.22
RAN-208	ENST00000537745	RIC3	Q7Z5B4	369 aa		13.68	□□□□□ -0.22
RAN-208	ENST00000537745	PODN	Q7Z5L7	613 aa		13.68	□□□□□ -0.22
RAN-208	ENST00000537745	OGFOD1	Q8N543	542 aa		13.68	□□□□□ -0.22
RAN-208	ENST00000537745	MARVELD3	Q96A59	401 aa		13.68	□□□□□ -0.22
RAN-208	ENST00000537745	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.68	□□□□□ -0.22
RAN-208	ENST00000537745	DBF4	Q9UBU7	674 aa	Predicted RBP	13.68	□□□□□ -0.22
RAN-208	ENST00000537745	ANGEL1	Q9UNK9	670 aa	Known RBP	13.68	□□□□□ -0.22
RAN-208	ENST00000537745	XDH	P47989	1333 aa		13.67	□□□□□ -0.22
RAN-208	ENST00000537745	PSME4	Q14997	1843 aa		13.67	□□□□□ -0.22
RAN-208	ENST00000537745	ZNF609	O15014	1411 aa		13.67	□□□□□ -0.22
RAN-208	ENST00000537745	ATP2B4	P23634	1241 aa		13.67	□□□□□ -0.22
RAN-208	ENST00000537745	SPRYD7	Q5W111	196 aa		13.67	□□□□□ -0.22
RAN-208	ENST00000537745	INTS3	Q68E01	1043 aa	Known RBP	13.67	□□□□□ -0.22
RAN-208	ENST00000537745	ANKRD18A	Q8IVF6	992 aa		13.67	□□□□□ -0.22
RAN-208	ENST00000537745	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms