RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 CHPF2Q9P2E5 772 aa6.88□□□□□ -1.31
CHD4-205ENST00000536301 GGA1Q9UJY5 639 aa6.88□□□□□ -1.31
CHD4-205ENST00000536301 ANGEL1Q9UNK9 670 aaKnown RBP6.88□□□□□ -1.31
CHD4-205ENST00000536301 PCDHAC2Q9Y5I4 1007 aa6.88□□□□□ -1.31
CHD4-205ENST00000536301 USP17L3A6NCW0 530 aa6.87□□□□□ -1.31
CHD4-205ENST00000536301 USP17L4A6NCW7 530 aa6.87□□□□□ -1.31
CHD4-205ENST00000536301 G3V3G9 751 aa6.87□□□□□ -1.31
CHD4-205ENST00000536301 CRHR2Q13324 411 aa6.87□□□□□ -1.31
CHD4-205ENST00000536301 DACT2Q5SW24 774 aa6.87□□□□□ -1.31
CHD4-205ENST00000536301 DCAF8Q5TAQ9 597 aa6.87□□□□□ -1.31
CHD4-205ENST00000536301 CHRDL2Q6WN34 429 aa6.87□□□□□ -1.31
CHD4-205ENST00000536301 USP17L1Q7RTZ2 530 aa6.87□□□□□ -1.31
CHD4-205ENST00000536301 TXNRD3Q86VQ6 643 aa6.87□□□□□ -1.31
CHD4-205ENST00000536301 WNK4Q96J92 1243 aa6.87□□□□□ -1.31
CHD4-205ENST00000536301 ZNF333Q96JL9 665 aa6.87□□□□□ -1.31
CHD4-205ENST00000536301 PTPN18Q99952 460 aa6.87□□□□□ -1.31
CHD4-205ENST00000536301 ANKIB1Q9P2G1 1089 aa6.87□□□□□ -1.31
CHD4-205ENST00000536301 KLRK1P26718 216 aa6.86□□□□□ -1.31
CHD4-205ENST00000536301 INTS3Q68E01 1043 aaKnown RBP6.86□□□□□ -1.31
CHD4-205ENST00000536301 ARMC9Q7Z3E5 817 aa6.86□□□□□ -1.31
CHD4-205ENST00000536301 PLBD2Q8NHP8 589 aa6.86□□□□□ -1.31
CHD4-205ENST00000536301 FBXW7Q969H0 707 aa6.86□□□□□ -1.31
CHD4-205ENST00000536301 ZBED3Q96IU2 234 aaPredicted RBP6.86□□□□□ -1.31
CHD4-205ENST00000536301 EFCC1Q9HA90 598 aa6.86□□□□□ -1.31
CHD4-205ENST00000536301 RBM27Q9P2N5 1060 aaKnown RBP6.86□□□□□ -1.31
CHD4-205ENST00000536301 PTCH2Q9Y6C5 1203 aa6.86□□□□□ -1.31
CHD4-205ENST00000536301 ECM29Q5VYK3 1845 aa6.85□□□□□ -1.31
CHD4-205ENST00000536301 MANSC4A6NHS7 340 aaPredicted RBP6.85□□□□□ -1.31
CHD4-205ENST00000536301 ANKRD13DQ6ZTN6 518 aa6.85□□□□□ -1.31
CHD4-205ENST00000536301 KIAA0825Q8IV33 1275 aa6.85□□□□□ -1.31
CHD4-205ENST00000536301 CNKSR2Q8WXI2 1034 aa6.85□□□□□ -1.31
CHD4-205ENST00000536301 SHISA4Q96DD7 197 aa6.85□□□□□ -1.31
CHD4-205ENST00000536301 ERO1AQ96HE7 468 aa6.85□□□□□ -1.31
CHD4-205ENST00000536301 MYH3P11055 1940 aa6.84□□□□□ -1.31
CHD4-205ENST00000536301 XDHP47989 1333 aa6.84□□□□□ -1.31
CHD4-205ENST00000536301 SOX1O00570 391 aaPredicted RBP6.84□□□□□ -1.31
CHD4-205ENST00000536301 ECM2O94769 699 aaPredicted RBP6.84□□□□□ -1.31
CHD4-205ENST00000536301 ALDH1A1P00352 501 aa6.84□□□□□ -1.31
CHD4-205ENST00000536301 ATP2B4P23634 1241 aa6.84□□□□□ -1.31
CHD4-205ENST00000536301 NF2P35240 595 aa6.84□□□□□ -1.31
CHD4-205ENST00000536301 RIPK4P57078 832 aa6.84□□□□□ -1.31
CHD4-205ENST00000536301 PODNQ7Z5L7 613 aa6.84□□□□□ -1.31
CHD4-205ENST00000536301 CDAN1Q8IWY9 1227 aa6.84□□□□□ -1.31
CHD4-205ENST00000536301 SLC17A8Q8NDX2 589 aa6.84□□□□□ -1.31
CHD4-205ENST00000536301 SH3TC2Q8TF17 1288 aa6.84□□□□□ -1.31
CHD4-205ENST00000536301 SLC10A4Q96EP9 437 aa6.84□□□□□ -1.31
CHD4-205ENST00000536301 ARHGAP39Q9C0H5 1083 aa6.84□□□□□ -1.31
CHD4-205ENST00000536301 MED23Q9ULK4 1368 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 MAPK8IP3Q9UPT6 1336 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 CLRN2A0PK11 232 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 SNAP23O00161 211 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 TMPOP42166 694 aaKnown RBP6.83□□□□□ -1.32
CHD4-205ENST00000536301 SP3Q02447 781 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 TRIM28Q13263 835 aaKnown RBP6.83□□□□□ -1.32
CHD4-205ENST00000536301 MTFR1Q15390 333 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 MAP3K11Q16584 847 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 SLC4A8Q2Y0W8 1093 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 NBPF12Q5TAG4 269 aaPredicted RBP6.83□□□□□ -1.32
CHD4-205ENST00000536301 HDGFL1Q5TGJ6 251 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 APOBEC3FQ8IUX4 373 aaKnown RBP6.83□□□□□ -1.32
CHD4-205ENST00000536301 CERS5Q8N5B7 392 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 ZBTB38Q8NAP3 1195 aaPredicted RBP6.83□□□□□ -1.32
CHD4-205ENST00000536301 MYD88Q99836 296 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 TMEM106CQ9BVX2 250 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 DEFB129Q9H1M3 183 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 PRO3102Q9H379 93 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 PHAXQ9H814 394 aaKnown RBP6.83□□□□□ -1.32
CHD4-205ENST00000536301 MINPP1Q9UNW1 487 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 LAS1LQ9Y4W2 734 aaKnown RBP6.83□□□□□ -1.32
CHD4-205ENST00000536301 ALPK3Q96L96 1907 aa6.83□□□□□ -1.32
CHD4-205ENST00000536301 TESPA1A2RU30 521 aaPredicted RBP6.82□□□□□ -1.32
CHD4-205ENST00000536301 CHL1O00533 1208 aa6.82□□□□□ -1.32
CHD4-205ENST00000536301 PDE8AO60658 829 aa6.82□□□□□ -1.32
CHD4-205ENST00000536301 USP2O75604 605 aaPredicted RBP6.82□□□□□ -1.32
CHD4-205ENST00000536301 PCCAP05165 728 aaPredicted RBP6.82□□□□□ -1.32
CHD4-205ENST00000536301 NEFMP07197 916 aa6.82□□□□□ -1.32
CHD4-205ENST00000536301 ZBTB48P10074 688 aaPredicted RBP6.82□□□□□ -1.32
CHD4-205ENST00000536301 CTGFP29279 349 aa6.82□□□□□ -1.32
CHD4-205ENST00000536301 CCT4P50991 539 aaKnown RBP6.82□□□□□ -1.32
CHD4-205ENST00000536301 GTF2IP78347 998 aa6.82□□□□□ -1.32
CHD4-205ENST00000536301 SLC9C1Q4G0N8 1177 aa6.82□□□□□ -1.32
CHD4-205ENST00000536301 CCDC152Q4G0S7 254 aa6.82□□□□□ -1.32
CHD4-205ENST00000536301 STRIP1Q5VSL9 837 aa6.82□□□□□ -1.32
CHD4-205ENST00000536301 ANKRD18AQ8IVF6 992 aa6.82□□□□□ -1.32
CHD4-205ENST00000536301 BRI3BPQ8WY22 251 aa6.82□□□□□ -1.32
CHD4-205ENST00000536301 LRCH3Q96II8 777 aa6.82□□□□□ -1.32
CHD4-205ENST00000536301 MS4A4AQ96JQ5 239 aa6.82□□□□□ -1.32
CHD4-205ENST00000536301 ELP3Q9H9T3 547 aa6.82□□□□□ -1.32
CHD4-205ENST00000536301 A0A1B0GUL6 1792 aa6.82□□□□□ -1.32
CHD4-205ENST00000536301 UNC80Q8N2C7 3258 aa6.81□□□□□ -1.32
CHD4-205ENST00000536301 COL1A1P02452 1464 aaPredicted RBP6.81□□□□□ -1.32
CHD4-205ENST00000536301 F8W031 263 aaPredicted RBP6.81□□□□□ -1.32
CHD4-205ENST00000536301 INHBEP58166 350 aa6.81□□□□□ -1.32
CHD4-205ENST00000536301 NEUROD2Q15784 382 aa6.81□□□□□ -1.32
CHD4-205ENST00000536301 TTLL5Q6EMB2 1281 aa6.81□□□□□ -1.32
CHD4-205ENST00000536301 RIC3Q7Z5B4 369 aa6.81□□□□□ -1.32
CHD4-205ENST00000536301 CCDC146Q8IYE0 955 aa6.81□□□□□ -1.32
CHD4-205ENST00000536301 FAM43AQ8N2R8 423 aa6.81□□□□□ -1.32
CHD4-205ENST00000536301 OGFOD1Q8N543 542 aa6.81□□□□□ -1.32
CHD4-205ENST00000536301 OPTNQ96CV9 577 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms