RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 TOB2Q14106 344 aaPredicted RBP21.82■■□□□ 1.08
HTATSF1-204ENST00000535601 GJD4Q96KN9 370 aaPredicted RBP21.82■■□□□ 1.08
HTATSF1-204ENST00000535601 BCL2L12Q9HB09 334 aa21.82■■□□□ 1.08
HTATSF1-204ENST00000535601 NSFL1CQ9UNZ2 370 aaKnown RBP21.82■■□□□ 1.08
HTATSF1-204ENST00000535601 RPS6KB1P23443 525 aa21.82■■□□□ 1.08
HTATSF1-204ENST00000535601 GTF2E1P29083 439 aaPredicted RBP21.82■■□□□ 1.08
HTATSF1-204ENST00000535601 DDX60Q8IY21 1712 aaKnown RBP21.81■■□□□ 1.08
HTATSF1-204ENST00000535601 BRD1O95696 1058 aa21.81■■□□□ 1.08
HTATSF1-204ENST00000535601 COL5A3P25940 1745 aaPredicted RBP21.81■■□□□ 1.08
HTATSF1-204ENST00000535601 INTS4Q96HW7 963 aaKnown RBP21.81■■□□□ 1.08
HTATSF1-204ENST00000535601 RBM27Q9P2N5 1060 aaKnown RBP21.81■■□□□ 1.08
HTATSF1-204ENST00000535601 SMC3Q9UQE7 1217 aa21.81■■□□□ 1.08
HTATSF1-204ENST00000535601 GJB2P29033 226 aa21.8■■□□□ 1.08
HTATSF1-204ENST00000535601 BCAMP50895 628 aa21.8■■□□□ 1.08
HTATSF1-204ENST00000535601 TM6SF1Q9BZW5 370 aa21.8■■□□□ 1.08
HTATSF1-204ENST00000535601 LMBRD1Q9NUN5 540 aa21.8■■□□□ 1.08
HTATSF1-204ENST00000535601 FOXP2O15409 715 aa21.8■■□□□ 1.08
HTATSF1-204ENST00000535601 GOLGA6L22H0YM25 854 aa21.79■■□□□ 1.08
HTATSF1-204ENST00000535601 SEPT12Q8IYM1 358 aa21.79■■□□□ 1.08
HTATSF1-204ENST00000535601 NEK1Q96PY6 1258 aa21.79■■□□□ 1.08
HTATSF1-204ENST00000535601 SYT1P21579 422 aa21.79■■□□□ 1.08
HTATSF1-204ENST00000535601 Q6ZUG5 572 aa21.79■■□□□ 1.08
HTATSF1-204ENST00000535601 WWC3Q9ULE0 1092 aa21.79■■□□□ 1.08
HTATSF1-204ENST00000535601 NAP1L2Q9ULW6 460 aaPredicted RBP21.79■■□□□ 1.08
HTATSF1-204ENST00000535601 PSMA5P28066 241 aa21.78■■□□□ 1.08
HTATSF1-204ENST00000535601 CCDC152Q4G0S7 254 aa21.78■■□□□ 1.08
HTATSF1-204ENST00000535601 SLC9C2Q5TAH2 1124 aa21.78■■□□□ 1.08
HTATSF1-204ENST00000535601 GPHNQ9NQX3 736 aaPredicted RBP21.78■■□□□ 1.08
HTATSF1-204ENST00000535601 HELLSQ9NRZ9 838 aa21.78■■□□□ 1.08
HTATSF1-204ENST00000535601 FBXO3Q9UK99 471 aa21.78■■□□□ 1.08
HTATSF1-204ENST00000535601 PARP10Q53GL7 1025 aa21.78■■□□□ 1.08
HTATSF1-204ENST00000535601 DENND2AQ9ULE3 1009 aa21.78■■□□□ 1.08
HTATSF1-204ENST00000535601 U3KPZ7 1027 aaPredicted RBP21.78■■□□□ 1.08
HTATSF1-204ENST00000535601 ABCC12Q96J65 1359 aa21.78■■□□□ 1.08
HTATSF1-204ENST00000535601 LAMA4Q16363 1823 aa21.78■■□□□ 1.08
HTATSF1-204ENST00000535601 FOSBP53539 338 aa21.77■■□□□ 1.08
HTATSF1-204ENST00000535601 PUM3Q15397 648 aaKnown RBP21.77■■□□□ 1.08
HTATSF1-204ENST00000535601 CAVIN1Q6NZI2 390 aaKnown RBP21.77■■□□□ 1.08
HTATSF1-204ENST00000535601 GAS2L3Q86XJ1 694 aa21.77■■□□□ 1.08
HTATSF1-204ENST00000535601 PANK2Q9BZ23 570 aa21.77■■□□□ 1.08
HTATSF1-204ENST00000535601 HSP90B1P14625 803 aaKnown RBP21.77■■□□□ 1.08
HTATSF1-204ENST00000535601 ZNF652Q9Y2D9 606 aa21.77■■□□□ 1.08
HTATSF1-204ENST00000535601 SPATA31A6Q5VVP1 1343 aa21.77■■□□□ 1.08
HTATSF1-204ENST00000535601 CHRNDQ07001 517 aa21.77■■□□□ 1.07
HTATSF1-204ENST00000535601 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.07
HTATSF1-204ENST00000535601 BRF1Q92994 677 aa21.77■■□□□ 1.07
HTATSF1-204ENST00000535601 VPS37CA5D8V6 355 aaPredicted RBP21.76■■□□□ 1.07
HTATSF1-204ENST00000535601 FGD1P98174 961 aa21.76■■□□□ 1.07
HTATSF1-204ENST00000535601 RASGRF1Q13972 1273 aa21.76■■□□□ 1.07
HTATSF1-204ENST00000535601 RAB11FIP4Q86YS3 637 aa21.76■■□□□ 1.07
HTATSF1-204ENST00000535601 GPT2Q8TD30 523 aa21.76■■□□□ 1.07
HTATSF1-204ENST00000535601 HMG20BQ9P0W2 317 aa21.76■■□□□ 1.07
HTATSF1-204ENST00000535601 IGHMBP2P38935 993 aaKnown RBP21.76■■□□□ 1.07
HTATSF1-204ENST00000535601 FERMT3Q86UX7 667 aa21.76■■□□□ 1.07
HTATSF1-204ENST00000535601 CELF1Q92879 486 aaKnown RBP21.76■■□□□ 1.07
HTATSF1-204ENST00000535601 RREB1Q92766 1687 aa21.75■■□□□ 1.07
HTATSF1-204ENST00000535601 GPAA1O43292 621 aa21.75■■□□□ 1.07
HTATSF1-204ENST00000535601 JAK2O60674 1132 aa21.75■■□□□ 1.07
HTATSF1-204ENST00000535601 FGFR2P21802 821 aa21.75■■□□□ 1.07
HTATSF1-204ENST00000535601 CLEC17AQ6ZS10 378 aa21.75■■□□□ 1.07
HTATSF1-204ENST00000535601 NKX2-3Q8TAU0 364 aa21.75■■□□□ 1.07
HTATSF1-204ENST00000535601 ARHGEF1Q92888 912 aaKnown RBP21.75■■□□□ 1.07
HTATSF1-204ENST00000535601 LRRC4BQ9NT99 713 aa21.75■■□□□ 1.07
HTATSF1-204ENST00000535601 MYH7P12883 1935 aa21.75■■□□□ 1.07
HTATSF1-204ENST00000535601 FAM173BQ6P4H8 233 aa21.74■■□□□ 1.07
HTATSF1-204ENST00000535601 STK11IPQ8N1F8 1099 aa21.74■■□□□ 1.07
HTATSF1-204ENST00000535601 LPIN2Q92539 896 aa21.74■■□□□ 1.07
HTATSF1-204ENST00000535601 RFX7Q2KHR2 1363 aa21.74■■□□□ 1.07
HTATSF1-204ENST00000535601 E7EWF7 191 aa21.74■■□□□ 1.07
HTATSF1-204ENST00000535601 STX6O43752 255 aa21.74■■□□□ 1.07
HTATSF1-204ENST00000535601 GADD45BO75293 160 aaPredicted RBP21.74■■□□□ 1.07
HTATSF1-204ENST00000535601 ZPR1O75312 459 aa21.74■■□□□ 1.07
HTATSF1-204ENST00000535601 GYG1P46976 350 aa21.74■■□□□ 1.07
HTATSF1-204ENST00000535601 APOBRQ0VD83 1088 aa21.74■■□□□ 1.07
HTATSF1-204ENST00000535601 DDX11Q96FC9 970 aa21.74■■□□□ 1.07
HTATSF1-204ENST00000535601 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.74■■□□□ 1.07
HTATSF1-204ENST00000535601 MROH5Q6ZUA9 1318 aa21.74■■□□□ 1.07
HTATSF1-204ENST00000535601 ZNF532Q9HCE3 1301 aa21.74■■□□□ 1.07
HTATSF1-204ENST00000535601 FGAP02671 866 aa21.73■■□□□ 1.07
HTATSF1-204ENST00000535601 TAOK2Q9UL54 1235 aa21.73■■□□□ 1.07
HTATSF1-204ENST00000535601 CNPY2Q9Y2B0 182 aa21.73■■□□□ 1.07
HTATSF1-204ENST00000535601 NPHP1O15259 732 aa21.73■■□□□ 1.07
HTATSF1-204ENST00000535601 FAM196AQ6ZSG2 479 aa21.73■■□□□ 1.07
HTATSF1-204ENST00000535601 NBPF5PQ86XG9 351 aaPredicted RBP21.73■■□□□ 1.07
HTATSF1-204ENST00000535601 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.73■■□□□ 1.07
HTATSF1-204ENST00000535601 INCENPQ9NQS7 918 aa21.73■■□□□ 1.07
HTATSF1-204ENST00000535601 GOLGA6L3A6NEY3 463 aa21.72■■□□□ 1.07
HTATSF1-204ENST00000535601 APPP05067 770 aa21.72■■□□□ 1.07
HTATSF1-204ENST00000535601 SLC5A1P13866 664 aa21.72■■□□□ 1.07
HTATSF1-204ENST00000535601 QTRT2Q9H974 415 aaKnown RBP21.72■■□□□ 1.07
HTATSF1-204ENST00000535601 KLRK1P26718 216 aa21.72■■□□□ 1.07
HTATSF1-204ENST00000535601 CCT2P78371 535 aaKnown RBP21.72■■□□□ 1.07
HTATSF1-204ENST00000535601 RTCBQ9Y3I0 505 aaKnown RBP21.72■■□□□ 1.07
HTATSF1-204ENST00000535601 SPATA5Q8NB90 893 aa21.72■■□□□ 1.07
HTATSF1-204ENST00000535601 APPBP2Q92624 585 aa21.72■■□□□ 1.07
HTATSF1-204ENST00000535601 SETDB2Q96T68 719 aa21.72■■□□□ 1.07
HTATSF1-204ENST00000535601 DSCC1Q9BVC3 393 aa21.72■■□□□ 1.07
HTATSF1-204ENST00000535601 NCOA5Q9HCD5 579 aaKnown RBP21.72■■□□□ 1.07
HTATSF1-204ENST00000535601 JAG2Q9Y219 1238 aa21.72■■□□□ 1.07
HTATSF1-204ENST00000535601 RPS6KA4O75676 772 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms