RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 C16orf45Q96MC5 204 aaPredicted RBP10.7□□□□□ -0.7
SF3B2-216ENST00000534765 OGFRQ9NZT2 677 aa10.7□□□□□ -0.7
SF3B2-216ENST00000534765 RAB11FIP3O75154 756 aa10.7□□□□□ -0.7
SF3B2-216ENST00000534765 HCLS1P14317 486 aaPredicted RBP10.7□□□□□ -0.7
SF3B2-216ENST00000534765 OS9Q13438 667 aaPredicted RBP10.7□□□□□ -0.7
SF3B2-216ENST00000534765 CWC27Q6UX04 472 aaKnown RBP10.7□□□□□ -0.7
SF3B2-216ENST00000534765 AKAP11Q9UKA4 1901 aa10.7□□□□□ -0.7
SF3B2-216ENST00000534765 A0A0D9SFI3 127 aa10.7□□□□□ -0.7
SF3B2-216ENST00000534765 TNNI3KQ59H18 835 aa10.7□□□□□ -0.7
SF3B2-216ENST00000534765 DZIP3Q86Y13 1208 aaKnown RBP10.7□□□□□ -0.7
SF3B2-216ENST00000534765 TSPY26PQ9H489 355 aa10.7□□□□□ -0.7
SF3B2-216ENST00000534765 SRP68Q9UHB9 627 aaKnown RBP10.7□□□□□ -0.7
SF3B2-216ENST00000534765 FPGT-TNNI3KV9GXZ4 949 aa10.7□□□□□ -0.7
SF3B2-216ENST00000534765 MCM5P33992 734 aa10.69□□□□□ -0.7
SF3B2-216ENST00000534765 PCNTO95613 3336 aa10.69□□□□□ -0.7
SF3B2-216ENST00000534765 CCDC191Q8NCU4 936 aa10.69□□□□□ -0.7
SF3B2-216ENST00000534765 NKX2-3Q8TAU0 364 aa10.69□□□□□ -0.7
SF3B2-216ENST00000534765 DRC1Q96MC2 740 aa10.69□□□□□ -0.7
SF3B2-216ENST00000534765 SEC31BQ9NQW1 1179 aa10.69□□□□□ -0.7
SF3B2-216ENST00000534765 ZNF34Q8IZ26 560 aa10.69□□□□□ -0.7
SF3B2-216ENST00000534765 A0A1B0GUL6 1792 aa10.69□□□□□ -0.7
SF3B2-216ENST00000534765 HS1BP3Q53T59 392 aa10.68□□□□□ -0.7
SF3B2-216ENST00000534765 CCDC129Q6ZRS4 1044 aa10.68□□□□□ -0.7
SF3B2-216ENST00000534765 TTLL11Q8NHH1 800 aa10.68□□□□□ -0.7
SF3B2-216ENST00000534765 GJD4Q96KN9 370 aaPredicted RBP10.68□□□□□ -0.7
SF3B2-216ENST00000534765 GOLGA6L1Q8N7Z2 621 aa10.68□□□□□ -0.7
SF3B2-216ENST00000534765 LSG1Q9H089 658 aaKnown RBP10.68□□□□□ -0.7
SF3B2-216ENST00000534765 STARD3NLO95772 234 aa10.68□□□□□ -0.7
SF3B2-216ENST00000534765 ADCK5Q3MIX3 580 aa10.68□□□□□ -0.7
SF3B2-216ENST00000534765 TNRC6CQ9HCJ0 1690 aaKnown RBP10.68□□□□□ -0.7
SF3B2-216ENST00000534765 CSF1RP07333 972 aa10.67□□□□□ -0.7
SF3B2-216ENST00000534765 SAMD1Q6SPF0 538 aaPredicted RBP10.67□□□□□ -0.7
SF3B2-216ENST00000534765 KRT222Q8N1A0 295 aa10.67□□□□□ -0.7
SF3B2-216ENST00000534765 TSPYL1Q9H0U9 437 aa10.67□□□□□ -0.7
SF3B2-216ENST00000534765 ZGPATQ8N5A5 531 aaKnown RBP10.67□□□□□ -0.7
SF3B2-216ENST00000534765 ZBTB38Q8NAP3 1195 aaPredicted RBP10.67□□□□□ -0.7
SF3B2-216ENST00000534765 HELBQ8NG08 1087 aaPredicted RBP10.67□□□□□ -0.7
SF3B2-216ENST00000534765 CCDC87Q9NVE4 849 aa10.67□□□□□ -0.7
SF3B2-216ENST00000534765 ATRNO75882 1429 aa10.67□□□□□ -0.7
SF3B2-216ENST00000534765 K7ELQ4 463 aaPredicted RBP10.67□□□□□ -0.7
SF3B2-216ENST00000534765 RAB3GAP1Q15042 981 aa10.67□□□□□ -0.7
SF3B2-216ENST00000534765 CCDC112Q8NEF3 446 aa10.67□□□□□ -0.7
SF3B2-216ENST00000534765 SYAP1Q96A49 352 aaPredicted RBP10.67□□□□□ -0.7
SF3B2-216ENST00000534765 UPF3BQ9BZI7 483 aaKnown RBP10.67□□□□□ -0.7
SF3B2-216ENST00000534765 ECHDC1Q9NTX5 307 aa10.67□□□□□ -0.7
SF3B2-216ENST00000534765 ZNF609O15014 1411 aa10.67□□□□□ -0.7
SF3B2-216ENST00000534765 SGSM2O43147 1006 aa10.66□□□□□ -0.7
SF3B2-216ENST00000534765 PRR29P0C7W0 189 aa10.66□□□□□ -0.7
SF3B2-216ENST00000534765 NAA30Q147X3 362 aaPredicted RBP10.66□□□□□ -0.7
SF3B2-216ENST00000534765 HSP90AB3PQ58FF7 597 aa10.66□□□□□ -0.7
SF3B2-216ENST00000534765 KCNG1Q9UIX4 513 aa10.66□□□□□ -0.7
SF3B2-216ENST00000534765 ERC2O15083 957 aa10.66□□□□□ -0.7
SF3B2-216ENST00000534765 IL6STP40189 918 aaPredicted RBP10.66□□□□□ -0.7
SF3B2-216ENST00000534765 G3BP1Q13283 466 aaKnown RBP eCLIP10.66□□□□□ -0.79e-14■■■■■ 29.1
SF3B2-216ENST00000534765 DDX46Q7L014 1031 aaKnown RBP10.66□□□□□ -0.7
SF3B2-216ENST00000534765 CLASRPQ8N2M8 674 aaKnown RBP10.66□□□□□ -0.7
SF3B2-216ENST00000534765 GTF3C6Q969F1 213 aa10.66□□□□□ -0.7
SF3B2-216ENST00000534765 CIZ1Q9ULV3 898 aaPredicted RBP10.66□□□□□ -0.7
SF3B2-216ENST00000534765 LRP5O75197 1615 aa10.66□□□□□ -0.7
SF3B2-216ENST00000534765 NMIQ13287 307 aaPredicted RBP10.66□□□□□ -0.7
SF3B2-216ENST00000534765 VGLL2Q8N8G2 317 aa10.66□□□□□ -0.7
SF3B2-216ENST00000534765 NOL10Q9BSC4 688 aaKnown RBP10.66□□□□□ -0.7
SF3B2-216ENST00000534765 ANO2Q9NQ90 1003 aa10.66□□□□□ -0.7
SF3B2-216ENST00000534765 SCN7AQ01118 1682 aa10.66□□□□□ -0.7
SF3B2-216ENST00000534765 PCCAP05165 728 aaPredicted RBP10.65□□□□□ -0.7
SF3B2-216ENST00000534765 GABPB1Q06547 395 aaPredicted RBP10.65□□□□□ -0.7
SF3B2-216ENST00000534765 TRIM28Q13263 835 aaKnown RBP10.65□□□□□ -0.7
SF3B2-216ENST00000534765 PROM2Q8N271 834 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 RASSF4Q9H2L5 321 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 GDPD2Q9HCC8 539 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 ZNF831Q5JPB2 1677 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 FOXP2O15409 715 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 IFIT2P09913 472 aaKnown RBP10.65□□□□□ -0.7
SF3B2-216ENST00000534765 IBSPP21815 317 aaPredicted RBP10.65□□□□□ -0.7
SF3B2-216ENST00000534765 TPD52L1Q16890 204 aaPredicted RBP10.65□□□□□ -0.7
SF3B2-216ENST00000534765 TEX35Q5T0J7 233 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 VPS53Q5VIR6 699 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 TBC1D9BQ66K14 1250 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 TTLL5Q6EMB2 1281 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 SEPT12Q8IYM1 358 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 FEZ1Q99689 392 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.65□□□□□ -0.7
SF3B2-216ENST00000534765 LAMA4Q16363 1823 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 ADCY5O95622 1261 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 NTSR2O95665 410 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 ITGA6P23229 1130 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 SNRKQ9NRH2 765 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 RIPOR2Q9Y4F9 1068 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 ABCC12Q96J65 1359 aa10.65□□□□□ -0.7
SF3B2-216ENST00000534765 IRS4O14654 1257 aaPredicted RBP10.65□□□□□ -0.71
SF3B2-216ENST00000534765 AOX1Q06278 1338 aa10.64□□□□□ -0.71
SF3B2-216ENST00000534765 SPATA31A6Q5VVP1 1343 aa10.64□□□□□ -0.71
SF3B2-216ENST00000534765 TAF5LO75529 589 aa10.64□□□□□ -0.71
SF3B2-216ENST00000534765 LARGE1O95461 756 aa10.64□□□□□ -0.71
SF3B2-216ENST00000534765 KIF6Q6ZMV9 814 aa10.64□□□□□ -0.71
SF3B2-216ENST00000534765 TRMT112Q9UI30 125 aaKnown RBP10.64□□□□□ -0.71
SF3B2-216ENST00000534765 A0A1B0GUL7 405 aa10.64□□□□□ -0.71
SF3B2-216ENST00000534765 ONECUT3O60422 494 aaPredicted RBP10.64□□□□□ -0.71
SF3B2-216ENST00000534765 NUCB2P80303 420 aa10.64□□□□□ -0.71
SF3B2-216ENST00000534765 GORABQ5T7V8 394 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms