RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 LMTK2Q8IWU2 1503 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 DDX11Q96FC9 970 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 TSG101Q99816 390 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 PPIP5K2O43314 1243 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 AMPD3Q01432 767 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 PDCL2Q8N4E4 241 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.01□□□□□ -0.332e-6■■■■■ 110.2
AMBRA1-211ENST00000533727 BCS1LQ9Y276 419 aa13.01□□□□□ -0.33
AMBRA1-211ENST00000533727 TSPYL6Q8N831 410 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 CALML4Q96GE6 196 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 ZMYND15Q9H091 742 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 TSPYL1Q9H0U9 437 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 FBXO3Q9UK99 471 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 CCDC83Q8IWF9 413 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 TMEM87AQ8NBN3 555 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 HELBQ8NG08 1087 aaPredicted RBP13□□□□□ -0.33
AMBRA1-211ENST00000533727 ZBTB43O43298 467 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 TFCP2Q12800 502 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 GCKRQ14397 625 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 TANGO6Q9C0B7 1094 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 ARHGEF10LQ9HCE6 1279 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 MYO6Q9UM54 1294 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 C20orf194Q5TEA3 1177 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 CEP85Q6P2H3 762 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 ARHGEF40Q8TER5 1519 aa13□□□□□ -0.33
AMBRA1-211ENST00000533727 GIGYF1O75420 1035 aaPredicted RBP12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 DCTPP1Q9H773 170 aa12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 UNC13BO14795 1591 aa12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 ANAPC15P60006 121 aa12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 GRM1Q13255 1194 aa12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 NAP1L4Q99733 375 aaKnown RBP12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 MAGEB6Q8N7X4 407 aa12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 PDILTQ8N807 584 aa12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 MAP3K15Q6ZN16 1313 aa12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 SMTNL1A8MU46 457 aa12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 MYCNP04198 464 aaPredicted RBP12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 USP8P40818 1118 aa12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 DLGAP5Q15398 846 aa12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 CCDC150Q8NCX0 1101 aa12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 DEF6Q9H4E7 631 aa12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 HELLSQ9NRZ9 838 aa12.99□□□□□ -0.33
AMBRA1-211ENST00000533727 UPF3BQ9BZI7 483 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-211ENST00000533727 PCCAP05165 728 aaPredicted RBP12.98□□□□□ -0.33
AMBRA1-211ENST00000533727 CALML3P27482 149 aa12.98□□□□□ -0.33
AMBRA1-211ENST00000533727 HAND2P61296 217 aa12.98□□□□□ -0.33
AMBRA1-211ENST00000533727 VAT1LQ9HCJ6 419 aa12.98□□□□□ -0.33
AMBRA1-211ENST00000533727 RTN1Q16799 776 aa12.98□□□□□ -0.33
AMBRA1-211ENST00000533727 PPFIBP1Q86W92 1011 aa12.98□□□□□ -0.33
AMBRA1-211ENST00000533727 SPC24Q8NBT2 197 aa12.98□□□□□ -0.33
AMBRA1-211ENST00000533727 PA2G4Q9UQ80 394 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-211ENST00000533727 OVOS2A0A0G2JMS6 1433 aa12.98□□□□□ -0.33
AMBRA1-211ENST00000533727 OVOS2A0A0J9YW53 1432 aa12.98□□□□□ -0.33
AMBRA1-211ENST00000533727 OVOS2Q6IE36 1432 aa12.98□□□□□ -0.33
AMBRA1-211ENST00000533727 MICU3Q86XE3 530 aa12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 ORC3Q9UBD5 711 aaPredicted RBP12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 RNF17Q9BXT8 1623 aaKnown RBP12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 CRKLP46109 303 aaKnown RBP12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 CHMP4BP1P59074 171 aa12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 SMARCC2Q8TAQ2 1214 aa12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 PRR36Q9H6K5 1346 aa12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 A0A1B0GUL7 405 aa12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 GLT8D2Q9H1C3 349 aa12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 C6orf50Q9HD87 102 aa12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 AOX1Q06278 1338 aa12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 KRT24Q2M2I5 525 aa12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 AXDND1Q5T1B0 1012 aaPredicted RBP12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 USP48Q86UV5 1035 aa12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 DIP2CQ9Y2E4 1556 aa12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 PTPRMP28827 1452 aa12.97□□□□□ -0.33
AMBRA1-211ENST00000533727 SERPINC1P01008 464 aa12.96□□□□□ -0.33
AMBRA1-211ENST00000533727 CTSWP56202 376 aa12.96□□□□□ -0.33
AMBRA1-211ENST00000533727 BRDTQ58F21 947 aaPredicted RBP12.96□□□□□ -0.33
AMBRA1-211ENST00000533727 ZBTB38Q8NAP3 1195 aaPredicted RBP12.96□□□□□ -0.33
AMBRA1-211ENST00000533727 RRP36Q96EU6 259 aaKnown RBP12.96□□□□□ -0.33
AMBRA1-211ENST00000533727 DCAF15Q66K64 600 aa12.96□□□□□ -0.33
AMBRA1-211ENST00000533727 NCAPD2Q15021 1401 aa12.96□□□□□ -0.33
AMBRA1-211ENST00000533727 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.33
AMBRA1-211ENST00000533727 KDRP35968 1356 aa12.96□□□□□ -0.34
AMBRA1-211ENST00000533727 ADRA2BP18089 450 aa12.96□□□□□ -0.34
AMBRA1-211ENST00000533727 ARHGAP27Q6ZUM4 889 aa12.96□□□□□ -0.34
AMBRA1-211ENST00000533727 WWC3Q9ULE0 1092 aa12.96□□□□□ -0.34
AMBRA1-211ENST00000533727 PTCH1Q13635 1447 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 KLF18A0A0U1RQI7 1052 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 CETN1Q12798 172 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 CCDC82Q8N4S0 544 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 CAGE1Q8TC20 777 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 ARHGEF6Q15052 776 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 TNNI3KQ59H18 835 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 SAMM50Q9Y512 469 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 FPGT-TNNI3KV9GXZ4 949 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 USP19O94966 1318 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 KANK3Q6NY19 840 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 TBC1D9Q6ZT07 1266 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 IL17REQ8NFR9 667 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 SLC26A6Q9BXS9 759 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 RBM28Q9NW13 759 aaKnown RBP12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 TRIM35Q9UPQ4 493 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 SPDYE3A6NKU9 549 aa12.95□□□□□ -0.34
AMBRA1-211ENST00000533727 ERVV-1B6SEH8 477 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms