RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 ITPK1Q13572 414 aa14.69□□□□□ -0.06
CHD7-211ENST00000532149 LRRC24Q50LG9 513 aa14.69□□□□□ -0.06
CHD7-211ENST00000532149 RUFY3Q7L099 469 aa14.69□□□□□ -0.06
CHD7-211ENST00000532149 KLHL34Q8N239 644 aa14.69□□□□□ -0.06
CHD7-211ENST00000532149 XAGE2Q96GT9 111 aa14.69□□□□□ -0.06
CHD7-211ENST00000532149 NARFQ9UHQ1 456 aa14.69□□□□□ -0.06
CHD7-211ENST00000532149 NIP7Q9Y221 180 aaKnown RBP eCLIP14.69□□□□□ -0.06
CHD7-211ENST00000532149 RBM8AQ9Y5S9 174 aaKnown RBP14.69□□□□□ -0.06
CHD7-211ENST00000532149 BCORQ6W2J9 1755 aa14.69□□□□□ -0.06
CHD7-211ENST00000532149 TTLL13PA6NNM8 815 aa14.68□□□□□ -0.06
CHD7-211ENST00000532149 RNF113AO15541 343 aaKnown RBP14.68□□□□□ -0.06
CHD7-211ENST00000532149 CD2BP2O95400 341 aaKnown RBP14.68□□□□□ -0.06
CHD7-211ENST00000532149 SLC5A1P13866 664 aa14.68□□□□□ -0.06
CHD7-211ENST00000532149 TIMM10P62072 90 aa14.68□□□□□ -0.06
CHD7-211ENST00000532149 GSE1Q14687 1217 aa14.68□□□□□ -0.06
CHD7-211ENST00000532149 SF3B3Q15393 1217 aaKnown RBP14.68□□□□□ -0.06
CHD7-211ENST00000532149 ZMYM1Q5SVZ6 1142 aa14.68□□□□□ -0.06
CHD7-211ENST00000532149 CREB3L3Q68CJ9 461 aa14.68□□□□□ -0.06
CHD7-211ENST00000532149 TTC14Q96N46 770 aa14.68□□□□□ -0.06
CHD7-211ENST00000532149 SGIP1Q9BQI5 828 aa14.68□□□□□ -0.06
CHD7-211ENST00000532149 GREM2Q9H772 168 aa14.68□□□□□ -0.06
CHD7-211ENST00000532149 UBN2Q6ZU65 1347 aa14.67□□□□□ -0.06
CHD7-211ENST00000532149 A0A0G2JS52 829 aa14.67□□□□□ -0.06
CHD7-211ENST00000532149 NTSR2O95665 410 aa14.67□□□□□ -0.06
CHD7-211ENST00000532149 SUSD4Q5VX71 490 aa14.67□□□□□ -0.06
CHD7-211ENST00000532149 DNAJC2Q99543 621 aaKnown RBP14.67□□□□□ -0.06
CHD7-211ENST00000532149 BCL11BQ9C0K0 894 aaPredicted RBP14.67□□□□□ -0.06
CHD7-211ENST00000532149 PALD1Q9ULE6 856 aa14.67□□□□□ -0.06
CHD7-211ENST00000532149 RTCBQ9Y3I0 505 aaKnown RBP14.67□□□□□ -0.06
CHD7-211ENST00000532149 ATP6V1DQ9Y5K8 247 aa14.67□□□□□ -0.06
CHD7-211ENST00000532149 LRP5O75197 1615 aa14.66□□□□□ -0.06
CHD7-211ENST00000532149 MYH14Q7Z406 1995 aaKnown RBP14.66□□□□□ -0.06
CHD7-211ENST00000532149 ZPR1O75312 459 aa14.66□□□□□ -0.06
CHD7-211ENST00000532149 CYP2E1P05181 493 aaPredicted RBP14.66□□□□□ -0.06
CHD7-211ENST00000532149 SLC27A3Q5K4L6 730 aa14.66□□□□□ -0.06
CHD7-211ENST00000532149 PRPF40BQ6NWY9 871 aaKnown RBP14.66□□□□□ -0.06
CHD7-211ENST00000532149 BLOC1S2Q6QNY1 142 aa14.66□□□□□ -0.06
CHD7-211ENST00000532149 VGLL2Q8N8G2 317 aa14.66□□□□□ -0.06
CHD7-211ENST00000532149 TNPO1Q92973 898 aaKnown RBP14.66□□□□□ -0.06
CHD7-211ENST00000532149 ZNF594Q96JF6 807 aaPredicted RBP14.66□□□□□ -0.06
CHD7-211ENST00000532149 PDRG1Q9NUG6 133 aa14.66□□□□□ -0.06
CHD7-211ENST00000532149 PCDHB13Q9Y5F0 798 aa14.66□□□□□ -0.06
CHD7-211ENST00000532149 WDR33Q9C0J8 1336 aaKnown RBP14.66□□□□□ -0.06
CHD7-211ENST00000532149 RPAP1Q9BWH6 1393 aaPredicted RBP14.65□□□□□ -0.06
CHD7-211ENST00000532149 A0A0D9SFI3 127 aa14.65□□□□□ -0.06
CHD7-211ENST00000532149 GOLIM4O00461 696 aa14.65□□□□□ -0.06
CHD7-211ENST00000532149 SLC27A2O14975 620 aa14.65□□□□□ -0.06
CHD7-211ENST00000532149 CASTP20810 708 aaKnown RBP14.65□□□□□ -0.06
CHD7-211ENST00000532149 PDCP20941 246 aa14.65□□□□□ -0.06
CHD7-211ENST00000532149 ARID4AP29374 1257 aaPredicted RBP14.65□□□□□ -0.06
CHD7-211ENST00000532149 PTH1RQ03431 593 aa14.65□□□□□ -0.06
CHD7-211ENST00000532149 TPTE2Q6XPS3 522 aa14.65□□□□□ -0.06
CHD7-211ENST00000532149 FAM196AQ6ZSG2 479 aa14.65□□□□□ -0.06
CHD7-211ENST00000532149 IFNL1Q8IU54 200 aa14.65□□□□□ -0.06
CHD7-211ENST00000532149 SPRYD3Q8NCJ5 442 aa14.65□□□□□ -0.06
CHD7-211ENST00000532149 FAM227BQ96M60 508 aa14.65□□□□□ -0.06
CHD7-211ENST00000532149 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.65□□□□□ -0.06
CHD7-211ENST00000532149 LY75O60449 1722 aa14.65□□□□□ -0.06
CHD7-211ENST00000532149 AFF2P51816 1311 aa14.65□□□□□ -0.06
CHD7-211ENST00000532149 BTAF1O14981 1849 aa14.64□□□□□ -0.07
CHD7-211ENST00000532149 KCNQ2O43526 872 aa14.64□□□□□ -0.07
CHD7-211ENST00000532149 FGFR2P21802 821 aa14.64□□□□□ -0.07
CHD7-211ENST00000532149 UBE3CQ15386 1083 aa14.64□□□□□ -0.07
CHD7-211ENST00000532149 FBXL16Q8N461 479 aa14.64□□□□□ -0.07
CHD7-211ENST00000532149 APPBP2Q92624 585 aa14.64□□□□□ -0.07
CHD7-211ENST00000532149 FAM212AQ96EL1 285 aa14.64□□□□□ -0.07
CHD7-211ENST00000532149 JAKMIP1Q96N16 626 aaKnown RBP14.64□□□□□ -0.07
CHD7-211ENST00000532149 SETDB2Q96T68 719 aa14.64□□□□□ -0.07
CHD7-211ENST00000532149 PUS3Q9BZE2 481 aaKnown RBP14.64□□□□□ -0.07
CHD7-211ENST00000532149 GNL3LQ9NVN8 582 aaKnown RBP14.64□□□□□ -0.07
CHD7-211ENST00000532149 CCNL1Q9UK58 526 aaPredicted RBP14.64□□□□□ -0.07
CHD7-211ENST00000532149 SCN7AQ01118 1682 aa14.64□□□□□ -0.07
CHD7-211ENST00000532149 ARAP2Q8WZ64 1704 aa14.63□□□□□ -0.07
CHD7-211ENST00000532149 UBE4AQ14139 1066 aa14.63□□□□□ -0.07
CHD7-211ENST00000532149 LINC00116Q8NCU8 138 aa14.63□□□□□ -0.07
CHD7-211ENST00000532149 IL25Q9H293 177 aa14.63□□□□□ -0.07
CHD7-211ENST00000532149 BSDC1Q9NW68 430 aaPredicted RBP14.63□□□□□ -0.07
CHD7-211ENST00000532149 KIF3AQ9Y496 699 aa14.63□□□□□ -0.07
CHD7-211ENST00000532149 RIC1Q4ADV7 1423 aa14.63□□□□□ -0.07
CHD7-211ENST00000532149 CARMIL3Q8ND23 1372 aa14.62□□□□□ -0.07
CHD7-211ENST00000532149 SEMA3EO15041 775 aa14.62□□□□□ -0.07
CHD7-211ENST00000532149 RPS6KB1P23443 525 aa14.62□□□□□ -0.07
CHD7-211ENST00000532149 GTF2E1P29083 439 aaPredicted RBP14.62□□□□□ -0.07
CHD7-211ENST00000532149 CSPP1Q1MSJ5 1256 aa14.62□□□□□ -0.07
CHD7-211ENST00000532149 DDX46Q7L014 1031 aaKnown RBP14.62□□□□□ -0.07
CHD7-211ENST00000532149 ANKRD18AQ8IVF6 992 aa14.62□□□□□ -0.07
CHD7-211ENST00000532149 RGS22Q8NE09 1264 aa14.62□□□□□ -0.07
CHD7-211ENST00000532149 NLRP3Q96P20 1036 aa14.62□□□□□ -0.07
CHD7-211ENST00000532149 NEK1Q96PY6 1258 aa14.62□□□□□ -0.07
CHD7-211ENST00000532149 ANKRD2Q9GZV1 360 aa14.62□□□□□ -0.07
CHD7-211ENST00000532149 WDR19Q8NEZ3 1342 aa14.62□□□□□ -0.07
CHD7-211ENST00000532149 HSPA1LP34931 641 aa14.61□□□□□ -0.07
CHD7-211ENST00000532149 AK2P54819 239 aa14.61□□□□□ -0.07
CHD7-211ENST00000532149 FKBP4Q02790 459 aaKnown RBP eCLIP14.61□□□□□ -0.07
CHD7-211ENST00000532149 MAP3K12Q12852 859 aa14.61□□□□□ -0.07
CHD7-211ENST00000532149 TRAPPC3LQ5T215 181 aa14.61□□□□□ -0.07
CHD7-211ENST00000532149 L1TD1Q5T7N2 865 aaKnown RBP14.61□□□□□ -0.07
CHD7-211ENST00000532149 UPF3BQ9BZI7 483 aaKnown RBP14.61□□□□□ -0.07
CHD7-211ENST00000532149 SBF2Q86WG5 1849 aa14.61□□□□□ -0.07
CHD7-211ENST00000532149 ZMYM6O95789 1325 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms