RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 CCDC146Q8IYE0 955 aa9.23□□□□□ -0.93
ITGB1-218ENST00000528877 TTLL6Q8N841 843 aa9.23□□□□□ -0.93
ITGB1-218ENST00000528877 PRKD2Q9BZL6 878 aa9.23□□□□□ -0.93
ITGB1-218ENST00000528877 SBF1O95248 1867 aa9.23□□□□□ -0.93
ITGB1-218ENST00000528877 FER1L6Q2WGJ9 1857 aa9.23□□□□□ -0.93
ITGB1-218ENST00000528877 SRGNP10124 158 aa9.22□□□□□ -0.93
ITGB1-218ENST00000528877 C1QTNF8P60827 252 aa9.22□□□□□ -0.93
ITGB1-218ENST00000528877 STYK1Q6J9G0 422 aa9.22□□□□□ -0.93
ITGB1-218ENST00000528877 NBPF5PQ86XG9 351 aaPredicted RBP9.22□□□□□ -0.93
ITGB1-218ENST00000528877 BEGAINQ9BUH8 593 aa9.22□□□□□ -0.93
ITGB1-218ENST00000528877 GPBP1L1Q9HC44 474 aaPredicted RBP9.22□□□□□ -0.93
ITGB1-218ENST00000528877 RRP7AQ9Y3A4 280 aaKnown RBP9.22□□□□□ -0.93
ITGB1-218ENST00000528877 RNF123Q5XPI4 1314 aa9.22□□□□□ -0.93
ITGB1-218ENST00000528877 LTBP3Q9NS15 1303 aa9.22□□□□□ -0.93
ITGB1-218ENST00000528877 ABCC12Q96J65 1359 aa9.22□□□□□ -0.93
ITGB1-218ENST00000528877 SNED1Q8TER0 1413 aa9.22□□□□□ -0.93
ITGB1-218ENST00000528877 LCE2BO14633 110 aa9.21□□□□□ -0.94
ITGB1-218ENST00000528877 ZNF853P0CG23 659 aa9.21□□□□□ -0.94
ITGB1-218ENST00000528877 GJA5P36382 358 aa9.21□□□□□ -0.94
ITGB1-218ENST00000528877 CALD1Q05682 793 aaKnown RBP9.21□□□□□ -0.94
ITGB1-218ENST00000528877 HLFQ16534 295 aa9.21□□□□□ -0.94
ITGB1-218ENST00000528877 KIF6Q6ZMV9 814 aa9.21□□□□□ -0.94
ITGB1-218ENST00000528877 ARHGAP27Q6ZUM4 889 aa9.21□□□□□ -0.94
ITGB1-218ENST00000528877 NIP7Q9Y221 180 aaKnown RBP eCLIP9.21□□□□□ -0.94
ITGB1-218ENST00000528877 UBN2Q6ZU65 1347 aa9.21□□□□□ -0.94
ITGB1-218ENST00000528877 NFKBIEO00221 500 aa9.2□□□□□ -0.94
ITGB1-218ENST00000528877 LMNB1P20700 586 aa9.2□□□□□ -0.94
ITGB1-218ENST00000528877 CRY2Q49AN0 593 aa9.2□□□□□ -0.94
ITGB1-218ENST00000528877 SOGA3Q5TF21 947 aa9.2□□□□□ -0.94
ITGB1-218ENST00000528877 C9orf131Q5VYM1 1079 aa9.2□□□□□ -0.94
ITGB1-218ENST00000528877 TPTE2Q6XPS3 522 aa9.2□□□□□ -0.94
ITGB1-218ENST00000528877 TTLL7Q6ZT98 887 aa9.2□□□□□ -0.94
ITGB1-218ENST00000528877 ZNF34Q8IZ26 560 aa9.2□□□□□ -0.94
ITGB1-218ENST00000528877 CNKSR1Q969H4 720 aa9.2□□□□□ -0.94
ITGB1-218ENST00000528877 MASTLQ96GX5 879 aa9.2□□□□□ -0.94
ITGB1-218ENST00000528877 USB1Q9BQ65 265 aaKnown RBP9.2□□□□□ -0.94
ITGB1-218ENST00000528877 NYXQ9GZU5 481 aa9.2□□□□□ -0.94
ITGB1-218ENST00000528877 IFT57Q9NWB7 429 aa9.2□□□□□ -0.94
ITGB1-218ENST00000528877 SLX4Q8IY92 1834 aa9.19□□□□□ -0.94
ITGB1-218ENST00000528877 MYL6BP14649 208 aa9.19□□□□□ -0.94
ITGB1-218ENST00000528877 NPR1P16066 1061 aa9.19□□□□□ -0.94
ITGB1-218ENST00000528877 CCDC27Q2M243 656 aa9.19□□□□□ -0.94
ITGB1-218ENST00000528877 PROSER3Q2NL68 480 aa9.19□□□□□ -0.94
ITGB1-218ENST00000528877 PRPF40BQ6NWY9 871 aaKnown RBP9.19□□□□□ -0.94
ITGB1-218ENST00000528877 SPIRE2Q8WWL2 714 aa9.19□□□□□ -0.94
ITGB1-218ENST00000528877 DDX21Q9NR30 783 aaKnown RBP eCLIP9.19□□□□□ -0.94
ITGB1-218ENST00000528877 DICER1Q9UPY3 1922 aaKnown RBP9.19□□□□□ -0.94
ITGB1-218ENST00000528877 SENP3-EIF4A1A0A087X0R7 540 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 APAF1O14727 1248 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 NPHP1O15259 732 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 NTSR2O95665 410 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 FDX1P10109 184 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 PRELPP51888 382 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 LAMB2P55268 1798 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 RASSF7Q02833 373 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 CACNA1SQ13698 1873 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 NEUROD2Q15784 382 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 PARP10Q53GL7 1025 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 RNF19BQ6ZMZ0 732 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 C7orf43Q8WVR3 580 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 WDR90Q96KV7 1748 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 MBIPQ9NS73 344 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 RNF181Q9P0P0 153 aa9.18□□□□□ -0.94
ITGB1-218ENST00000528877 KDM2BQ8NHM5 1336 aa9.17□□□□□ -0.94
ITGB1-218ENST00000528877 MS4A1P11836 297 aa9.17□□□□□ -0.94
ITGB1-218ENST00000528877 HOXA10P31260 410 aaPredicted RBP9.17□□□□□ -0.94
ITGB1-218ENST00000528877 SLC19A1P41440 591 aa9.17□□□□□ -0.94
ITGB1-218ENST00000528877 GNAI1P63096 354 aa9.17□□□□□ -0.94
ITGB1-218ENST00000528877 KRT24Q2M2I5 525 aa9.17□□□□□ -0.94
ITGB1-218ENST00000528877 CCDC184Q52MB2 194 aa9.17□□□□□ -0.94
ITGB1-218ENST00000528877 HDGFL1Q5TGJ6 251 aa9.17□□□□□ -0.94
ITGB1-218ENST00000528877 RETREG3Q86VR2 466 aa9.17□□□□□ -0.94
ITGB1-218ENST00000528877 CCDC24Q8N4L8 307 aa9.17□□□□□ -0.94
ITGB1-218ENST00000528877 FAM160A2Q8N612 972 aaPredicted RBP9.17□□□□□ -0.94
ITGB1-218ENST00000528877 ZBTB3Q9H5J0 574 aa9.17□□□□□ -0.94
ITGB1-218ENST00000528877 DBF4Q9UBU7 674 aaPredicted RBP9.17□□□□□ -0.94
ITGB1-218ENST00000528877 IL16Q14005 1332 aa9.16□□□□□ -0.94
ITGB1-218ENST00000528877 SPDYE5A6NIY4 337 aa9.16□□□□□ -0.94
ITGB1-218ENST00000528877 C21orf2O43822 256 aa9.16□□□□□ -0.94
ITGB1-218ENST00000528877 EIF2S2P20042 333 aaKnown RBP9.16□□□□□ -0.94
ITGB1-218ENST00000528877 HSP90AB3PQ58FF7 597 aa9.16□□□□□ -0.94
ITGB1-218ENST00000528877 ZNF787Q6DD87 383 aa9.16□□□□□ -0.94
ITGB1-218ENST00000528877 ZNF526Q8TF50 670 aaPredicted RBP9.16□□□□□ -0.94
ITGB1-218ENST00000528877 XAGE3Q8WTP9 111 aa9.16□□□□□ -0.94
ITGB1-218ENST00000528877 ZNF622Q969S3 477 aaKnown RBP eCLIP9.16□□□□□ -0.945e-8■□□□□ 8.1
ITGB1-218ENST00000528877 TAOK3Q9H2K8 898 aa9.16□□□□□ -0.94
ITGB1-218ENST00000528877 CHPF2Q9P2E5 772 aa9.16□□□□□ -0.94
ITGB1-218ENST00000528877 LRRC37AA6NMS7 1700 aa9.16□□□□□ -0.94
ITGB1-218ENST00000528877 DDX60Q8IY21 1712 aaKnown RBP9.15□□□□□ -0.94
ITGB1-218ENST00000528877 ANP32CO43423 234 aa9.15□□□□□ -0.94
ITGB1-218ENST00000528877 GFRA3O60609 400 aa9.15□□□□□ -0.94
ITGB1-218ENST00000528877 ALDH1B1P30837 517 aa9.15□□□□□ -0.94
ITGB1-218ENST00000528877 MMP16P51512 607 aa9.15□□□□□ -0.94
ITGB1-218ENST00000528877 ERFEQ4G0M1 354 aa9.15□□□□□ -0.94
ITGB1-218ENST00000528877 CCDC93Q567U6 631 aa9.15□□□□□ -0.94
ITGB1-218ENST00000528877 SUSD4Q5VX71 490 aa9.15□□□□□ -0.94
ITGB1-218ENST00000528877 DUSP27Q5VZP5 1158 aa9.15□□□□□ -0.94
ITGB1-218ENST00000528877 COPS6Q7L5N1 327 aa9.15□□□□□ -0.94
ITGB1-218ENST00000528877 PPP1R42Q7Z4L9 355 aa9.15□□□□□ -0.94
ITGB1-218ENST00000528877 NGEFQ8N5V2 710 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms