RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 HGSNATQ68CP4 663 aa3.79□□□□□ -1.8
CD44-212ENST00000524922 SLC51AQ86UW1 340 aa3.79□□□□□ -1.8
CD44-212ENST00000524922 KRTAP1-3Q8IUG1 177 aa3.79□□□□□ -1.8
CD44-212ENST00000524922 ABTB2Q8N961 1025 aa3.79□□□□□ -1.8
CD44-212ENST00000524922 C1orf127Q8N9H9 656 aa3.79□□□□□ -1.8
CD44-212ENST00000524922 CARD10Q9BWT7 1032 aa3.79□□□□□ -1.8
CD44-212ENST00000524922 LACRTQ9GZZ8 138 aa3.79□□□□□ -1.8
CD44-212ENST00000524922 DZANK1Q9NVP4 752 aa3.79□□□□□ -1.8
CD44-212ENST00000524922 FAM13BQ9NYF5 915 aa3.79□□□□□ -1.8
CD44-212ENST00000524922 KANSL3Q9P2N6 904 aa3.79□□□□□ -1.8
CD44-212ENST00000524922 A6NHS1 94 aa3.78□□□□□ -1.8
CD44-212ENST00000524922 KIAA1324LA8MWY0 1029 aaPredicted RBP3.78□□□□□ -1.8
CD44-212ENST00000524922 ADAMTS4O75173 837 aa3.78□□□□□ -1.8
CD44-212ENST00000524922 CDC27P30260 824 aa3.78□□□□□ -1.8
CD44-212ENST00000524922 ZDHHC13Q8IUH4 622 aa3.78□□□□□ -1.8
CD44-212ENST00000524922 UBASH3BQ8TF42 649 aa3.78□□□□□ -1.8
CD44-212ENST00000524922 KLHDC7BQ96G42 594 aa3.78□□□□□ -1.8
CD44-212ENST00000524922 RBSNQ9H1K0 784 aa3.78□□□□□ -1.8
CD44-212ENST00000524922 SOX13Q9UN79 622 aa3.78□□□□□ -1.8
CD44-212ENST00000524922 FNDC3AQ9Y2H6 1198 aaKnown RBP3.78□□□□□ -1.8
CD44-212ENST00000524922 PRR19A6NJB7 356 aa3.77□□□□□ -1.81
CD44-212ENST00000524922 ARID3CA6NKF2 412 aa3.77□□□□□ -1.81
CD44-212ENST00000524922 TRPA1O75762 1119 aa3.77□□□□□ -1.81
CD44-212ENST00000524922 SMNDC1O75940 238 aaKnown RBP eCLIP3.77□□□□□ -1.81
CD44-212ENST00000524922 MPSTP25325 297 aa3.77□□□□□ -1.81
CD44-212ENST00000524922 EIF1AXP47813 144 aaKnown RBP3.77□□□□□ -1.81
CD44-212ENST00000524922 MTMR3Q13615 1198 aa3.77□□□□□ -1.81
CD44-212ENST00000524922 ECM1Q16610 540 aa3.77□□□□□ -1.81
CD44-212ENST00000524922 TTC39BQ5VTQ0 682 aaPredicted RBP3.77□□□□□ -1.81
CD44-212ENST00000524922 PEAR1Q5VY43 1037 aaPredicted RBP3.77□□□□□ -1.81
CD44-212ENST00000524922 VN1R5Q7Z5H4 357 aa3.77□□□□□ -1.81
CD44-212ENST00000524922 KLHL23Q8NBE8 558 aa3.77□□□□□ -1.81
CD44-212ENST00000524922 EDEM1Q92611 657 aa3.77□□□□□ -1.81
CD44-212ENST00000524922 MYRFLQ96LU7 910 aa3.77□□□□□ -1.81
CD44-212ENST00000524922 RAXQ9Y2V3 346 aa3.77□□□□□ -1.81
CD44-212ENST00000524922 H3BRJ5 948 aa3.76□□□□□ -1.81
CD44-212ENST00000524922 FZD6O60353 706 aa3.76□□□□□ -1.81
CD44-212ENST00000524922 IGLV1-40P01703 118 aa3.76□□□□□ -1.81
CD44-212ENST00000524922 GLB1P16278 677 aa3.76□□□□□ -1.81
CD44-212ENST00000524922 MZF1P28698 734 aaPredicted RBP3.76□□□□□ -1.81
CD44-212ENST00000524922 ACAD11Q709F0 780 aa3.76□□□□□ -1.81
CD44-212ENST00000524922 DCAF11Q8TEB1 546 aa3.76□□□□□ -1.81
CD44-212ENST00000524922 GTF3C2Q8WUA4 911 aaPredicted RBP3.76□□□□□ -1.81
CD44-212ENST00000524922 WNT8BQ93098 351 aa3.76□□□□□ -1.81
CD44-212ENST00000524922 NXPE3Q969Y0 559 aa3.76□□□□□ -1.81
CD44-212ENST00000524922 NRSN2Q9GZP1 204 aa3.76□□□□□ -1.81
CD44-212ENST00000524922 SERPINA10Q9UK55 444 aa3.76□□□□□ -1.81
CD44-212ENST00000524922 HMX2A2RU54 273 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 CARNS1A5YM72 827 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 EREGO14944 169 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 TNFRSF21O75509 655 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 DLGAP3O95886 979 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 TGFB1P01137 390 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 PTPRAP18433 802 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 SPINK2P20155 84 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 CDC25BP30305 580 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 PREPP48147 710 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 PIP4K2BP78356 416 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 DNM1Q05193 864 aaKnown RBP3.75□□□□□ -1.81
CD44-212ENST00000524922 UVSSAQ2YD98 709 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 NOM1Q5C9Z4 860 aaKnown RBP3.75□□□□□ -1.81
CD44-212ENST00000524922 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.75□□□□□ -1.81
CD44-212ENST00000524922 ZNF438Q7Z4V0 828 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 NCAPG2Q86XI2 1143 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 TRIM42Q8IWZ5 723 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 TMEM102Q8N9M5 508 aaPredicted RBP3.75□□□□□ -1.81
CD44-212ENST00000524922 SPACA7Q96KW9 195 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 ZKSCAN3Q9BRR0 538 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 BHLHE41Q9C0J9 482 aaPredicted RBP3.75□□□□□ -1.81
CD44-212ENST00000524922 C7orf69Q9H7B7 122 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 OSGEPQ9NPF4 335 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 SEC31BQ9NQW1 1179 aa3.75□□□□□ -1.81
CD44-212ENST00000524922 MEGF11A6BM72 1044 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 PDE2AO00408 941 aaPredicted RBP3.74□□□□□ -1.81
CD44-212ENST00000524922 SOX1O00570 391 aaPredicted RBP3.74□□□□□ -1.81
CD44-212ENST00000524922 DHX15O43143 795 aaKnown RBP3.74□□□□□ -1.81
CD44-212ENST00000524922 CES1P23141 567 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 NFIAQ12857 509 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 DUOXA2Q1HG44 320 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 RNF43Q68DV7 783 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 NBPF11Q86T75 865 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 FAM20CQ8IXL6 584 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 GJD3Q8N144 294 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 CCDC82Q8N4S0 544 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 CCDC97Q96F63 343 aaPredicted RBP3.74□□□□□ -1.81
CD44-212ENST00000524922 TMPRSS13Q9BYE2 586 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 LATS2Q9NRM7 1088 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 STOML1Q9UBI4 398 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 FOXD3Q9UJU5 478 aaPredicted RBP3.74□□□□□ -1.81
CD44-212ENST00000524922 POLIQ9UNA4 740 aa3.74□□□□□ -1.81
CD44-212ENST00000524922 COL17A1Q9UMD9 1497 aaPredicted RBP3.73□□□□□ -1.81
CD44-212ENST00000524922 TIAF1O95411 115 aa3.73□□□□□ -1.81
CD44-212ENST00000524922 IGHA2P01877 340 aa3.73□□□□□ -1.81
CD44-212ENST00000524922 RPLP1P05386 114 aaKnown RBP3.73□□□□□ -1.81
CD44-212ENST00000524922 SSTR4P31391 388 aa3.73□□□□□ -1.81
CD44-212ENST00000524922 MCTP1Q6DN14 999 aa3.73□□□□□ -1.81
CD44-212ENST00000524922 NFXL1Q6ZNB6 911 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms