RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 MED23Q9ULK4 1368 aa19■□□□□ 0.63
CSTF3-204ENST00000524556 CTSWP56202 376 aa18.99■□□□□ 0.63
CSTF3-204ENST00000524556 DACT2Q5SW24 774 aa18.99■□□□□ 0.63
CSTF3-204ENST00000524556 C8orf58Q8NAV2 365 aa18.99■□□□□ 0.63
CSTF3-204ENST00000524556 BSDC1Q9NW68 430 aaPredicted RBP18.99■□□□□ 0.63
CSTF3-204ENST00000524556 MINPP1Q9UNW1 487 aa18.99■□□□□ 0.63
CSTF3-204ENST00000524556 CALD1Q05682 793 aaKnown RBP18.98■□□□□ 0.63
CSTF3-204ENST00000524556 DDX10Q13206 875 aaKnown RBP18.98■□□□□ 0.63
CSTF3-204ENST00000524556 TTLL12Q14166 644 aaPredicted RBP18.98■□□□□ 0.63
CSTF3-204ENST00000524556 NOM1Q5C9Z4 860 aaKnown RBP18.98■□□□□ 0.63
CSTF3-204ENST00000524556 PRPF38BQ5VTL8 546 aaKnown RBP18.98■□□□□ 0.63
CSTF3-204ENST00000524556 OGFOD1Q8N543 542 aa18.98■□□□□ 0.63
CSTF3-204ENST00000524556 TTLL11Q8NHH1 800 aa18.98■□□□□ 0.63
CSTF3-204ENST00000524556 MXD3Q9BW11 206 aa18.98■□□□□ 0.63
CSTF3-204ENST00000524556 MAP3K2Q9Y2U5 619 aa18.98■□□□□ 0.63
CSTF3-204ENST00000524556 WNT10BO00744 389 aa18.97■□□□□ 0.63
CSTF3-204ENST00000524556 CCT4P50991 539 aaKnown RBP18.97■□□□□ 0.63
CSTF3-204ENST00000524556 STRIP1Q5VSL9 837 aa18.97■□□□□ 0.63
CSTF3-204ENST00000524556 CCDC30Q5VVM6 783 aa18.97■□□□□ 0.63
CSTF3-204ENST00000524556 CHMP4AQ9BY43 222 aa18.97■□□□□ 0.63
CSTF3-204ENST00000524556 MYO3BQ8WXR4 1341 aa18.97■□□□□ 0.63
CSTF3-204ENST00000524556 GPR25O00155 361 aa18.96■□□□□ 0.63
CSTF3-204ENST00000524556 APAF1O14727 1248 aa18.96■□□□□ 0.63
CSTF3-204ENST00000524556 IGKV5-2P06315 115 aa18.96■□□□□ 0.63
CSTF3-204ENST00000524556 NF2P35240 595 aa18.96■□□□□ 0.63
CSTF3-204ENST00000524556 MMP14P50281 582 aa18.96■□□□□ 0.63
CSTF3-204ENST00000524556 COA1Q9GZY4 146 aa18.96■□□□□ 0.63
CSTF3-204ENST00000524556 GREM2Q9H772 168 aa18.96■□□□□ 0.63
CSTF3-204ENST00000524556 MKRN3Q13064 507 aaKnown RBP18.95■□□□□ 0.62
CSTF3-204ENST00000524556 KSR2Q6VAB6 950 aa18.95■□□□□ 0.62
CSTF3-204ENST00000524556 FBXW7Q969H0 707 aa18.95■□□□□ 0.62
CSTF3-204ENST00000524556 PI4KAP2A4QPH2 592 aa18.94■□□□□ 0.62
CSTF3-204ENST00000524556 SASH1O94885 1247 aa18.94■□□□□ 0.62
CSTF3-204ENST00000524556 PTPN12Q05209 780 aaKnown RBP18.94■□□□□ 0.62
CSTF3-204ENST00000524556 TXNRD3Q86VQ6 643 aa18.94■□□□□ 0.62
CSTF3-204ENST00000524556 PI4KAP1Q8N8J0 262 aa18.94■□□□□ 0.62
CSTF3-204ENST00000524556 LEMD3Q9Y2U8 911 aa18.94■□□□□ 0.62
CSTF3-204ENST00000524556 SREBF2Q12772 1141 aa18.93■□□□□ 0.62
CSTF3-204ENST00000524556 TTLL5Q6EMB2 1281 aa18.93■□□□□ 0.62
CSTF3-204ENST00000524556 FBXO46Q6PJ61 603 aaPredicted RBP18.93■□□□□ 0.62
CSTF3-204ENST00000524556 ARMC9Q7Z3E5 817 aa18.93■□□□□ 0.62
CSTF3-204ENST00000524556 CFHR5Q9BXR6 569 aa18.93■□□□□ 0.62
CSTF3-204ENST00000524556 NEXNQ0ZGT2 675 aa18.92■□□□□ 0.62
CSTF3-204ENST00000524556 APOBEC3FQ8IUX4 373 aaKnown RBP18.92■□□□□ 0.62
CSTF3-204ENST00000524556 TSPYL6Q8N831 410 aa18.92■□□□□ 0.62
CSTF3-204ENST00000524556 FKTNO75072 461 aa18.91■□□□□ 0.62
CSTF3-204ENST00000524556 PRKG1Q13976 671 aa18.91■□□□□ 0.62
CSTF3-204ENST00000524556 LDLRAD1Q5T700 205 aa18.91■□□□□ 0.62
CSTF3-204ENST00000524556 ZBED3Q96IU2 234 aaPredicted RBP18.91■□□□□ 0.62
CSTF3-204ENST00000524556 R3HDMLQ9H3Y0 253 aa18.91■□□□□ 0.62
CSTF3-204ENST00000524556 NEURL1BA8MQ27 555 aa18.9■□□□□ 0.62
CSTF3-204ENST00000524556 H7C1W4 665 aa18.9■□□□□ 0.62
CSTF3-204ENST00000524556 IGHMBP2P38935 993 aaKnown RBP18.9■□□□□ 0.62
CSTF3-204ENST00000524556 CWF19L2Q2TBE0 894 aaKnown RBP18.9■□□□□ 0.62
CSTF3-204ENST00000524556 SPRYD7Q5W111 196 aa18.9■□□□□ 0.62
CSTF3-204ENST00000524556 KIAA0825Q8IV33 1275 aa18.9■□□□□ 0.62
CSTF3-204ENST00000524556 ANKRD2Q9GZV1 360 aa18.9■□□□□ 0.62
CSTF3-204ENST00000524556 ZNF804BA4D1E1 1349 aa18.9■□□□□ 0.62
CSTF3-204ENST00000524556 HTTP42858 3142 aa18.89■□□□□ 0.62
CSTF3-204ENST00000524556 KLRK1P26718 216 aa18.89■□□□□ 0.61
CSTF3-204ENST00000524556 MKI67P46013 3256 aaKnown RBP18.89■□□□□ 0.61
CSTF3-204ENST00000524556 CENPFP49454 3210 aa18.88■□□□□ 0.61
CSTF3-204ENST00000524556 ALDH1A1P00352 501 aa18.88■□□□□ 0.61
CSTF3-204ENST00000524556 GTF2IP78347 998 aa18.88■□□□□ 0.61
CSTF3-204ENST00000524556 UBE3BQ7Z3V4 1068 aa18.88■□□□□ 0.61
CSTF3-204ENST00000524556 PLA2G12BQ9BX93 195 aa18.88■□□□□ 0.61
CSTF3-204ENST00000524556 STK31Q9BXU1 1019 aa18.88■□□□□ 0.61
CSTF3-204ENST00000524556 PRKRIP1Q9H875 184 aaPredicted RBP18.88■□□□□ 0.61
CSTF3-204ENST00000524556 ANGEL1Q9UNK9 670 aaKnown RBP18.88■□□□□ 0.61
CSTF3-204ENST00000524556 COL1A1P02452 1464 aaPredicted RBP18.87■□□□□ 0.61
CSTF3-204ENST00000524556 ITGA6P23229 1130 aa18.87■□□□□ 0.61
CSTF3-204ENST00000524556 MPHOSPH8Q99549 860 aa18.87■□□□□ 0.61
CSTF3-204ENST00000524556 ECM29Q5VYK3 1845 aa18.86■□□□□ 0.61
CSTF3-204ENST00000524556 INHBEP58166 350 aa18.86■□□□□ 0.61
CSTF3-204ENST00000524556 G2E3Q7L622 706 aa18.86■□□□□ 0.61
CSTF3-204ENST00000524556 SLC10A4Q96EP9 437 aa18.86■□□□□ 0.61
CSTF3-204ENST00000524556 DEFB129Q9H1M3 183 aa18.86■□□□□ 0.61
CSTF3-204ENST00000524556 CD209Q9NNX6 404 aa18.86■□□□□ 0.61
CSTF3-204ENST00000524556 FZD1Q9UP38 647 aa18.86■□□□□ 0.61
CSTF3-204ENST00000524556 MANSC4A6NHS7 340 aaPredicted RBP18.85■□□□□ 0.61
CSTF3-204ENST00000524556 CSF1RP07333 972 aa18.85■□□□□ 0.61
CSTF3-204ENST00000524556 CASP7P55210 303 aa18.85■□□□□ 0.61
CSTF3-204ENST00000524556 GCKRQ14397 625 aa18.85■□□□□ 0.61
CSTF3-204ENST00000524556 DLGAP5Q15398 846 aa18.85■□□□□ 0.61
CSTF3-204ENST00000524556 MAP3K11Q16584 847 aa18.85■□□□□ 0.61
CSTF3-204ENST00000524556 IFNL1Q8IU54 200 aa18.85■□□□□ 0.61
CSTF3-204ENST00000524556 MTMR14Q8NCE2 650 aa18.85■□□□□ 0.61
CSTF3-204ENST00000524556 TSR2Q969E8 191 aaKnown RBP18.85■□□□□ 0.61
CSTF3-204ENST00000524556 LAMB1P07942 1786 aa18.85■□□□□ 0.61
CSTF3-204ENST00000524556 KCNJ4P48050 445 aa18.84■□□□□ 0.61
CSTF3-204ENST00000524556 CHRNDQ07001 517 aa18.84■□□□□ 0.61
CSTF3-204ENST00000524556 PPP1R12BO60237 982 aaPredicted RBP18.83■□□□□ 0.6
CSTF3-204ENST00000524556 SLC4A2P04920 1241 aa18.83■□□□□ 0.6
CSTF3-204ENST00000524556 ZBTB48P10074 688 aaPredicted RBP18.83■□□□□ 0.6
CSTF3-204ENST00000524556 CERS5Q8N5B7 392 aa18.83■□□□□ 0.6
CSTF3-204ENST00000524556 WNK4Q96J92 1243 aa18.83■□□□□ 0.6
CSTF3-204ENST00000524556 TRIM17Q9Y577 477 aa18.83■□□□□ 0.6
CSTF3-204ENST00000524556 CACNA1FO60840 1977 aa18.82■□□□□ 0.6
CSTF3-204ENST00000524556 IRS2Q9Y4H2 1338 aa18.82■□□□□ 0.6
CSTF3-204ENST00000524556 UNCXA6NJT0 531 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms