RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 PPP2R1AP30153 589 aa22.94■■□□□ 1.26
PVT1-220ENST00000524165 OTUD7BQ6GQQ9 843 aa22.94■■□□□ 1.26
PVT1-220ENST00000524165 CHRDL2Q6WN34 429 aa22.94■■□□□ 1.26
PVT1-220ENST00000524165 APOBEC3FQ8IUX4 373 aaKnown RBP22.94■■□□□ 1.26
PVT1-220ENST00000524165 SP3Q02447 781 aa22.93■■□□□ 1.26
PVT1-220ENST00000524165 CRHR2Q13324 411 aa22.93■■□□□ 1.26
PVT1-220ENST00000524165 MAP3K11Q16584 847 aa22.93■■□□□ 1.26
PVT1-220ENST00000524165 PLBD2Q8NHP8 589 aa22.93■■□□□ 1.26
PVT1-220ENST00000524165 COL1A1P02452 1464 aaPredicted RBP22.92■■□□□ 1.26
PVT1-220ENST00000524165 MYO3BQ8WXR4 1341 aa22.92■■□□□ 1.26
PVT1-220ENST00000524165 IRS4O14654 1257 aaPredicted RBP22.92■■□□□ 1.26
PVT1-220ENST00000524165 WNK4Q96J92 1243 aa22.92■■□□□ 1.26
PVT1-220ENST00000524165 PLEKHF1Q96S99 279 aa22.92■■□□□ 1.26
PVT1-220ENST00000524165 BABAM1Q9NWV8 329 aa22.92■■□□□ 1.26
PVT1-220ENST00000524165 RBM27Q9P2N5 1060 aaKnown RBP22.92■■□□□ 1.26
PVT1-220ENST00000524165 XDHP47989 1333 aa22.91■■□□□ 1.26
PVT1-220ENST00000524165 UNCXA6NJT0 531 aa22.91■■□□□ 1.26
PVT1-220ENST00000524165 SLC4A8Q2Y0W8 1093 aa22.91■■□□□ 1.26
PVT1-220ENST00000524165 SLC9C1Q4G0N8 1177 aa22.91■■□□□ 1.26
PVT1-220ENST00000524165 SEC31BQ9NQW1 1179 aa22.91■■□□□ 1.26
PVT1-220ENST00000524165 ARHGEF6Q15052 776 aa22.9■■□□□ 1.26
PVT1-220ENST00000524165 DACT2Q5SW24 774 aa22.9■■□□□ 1.26
PVT1-220ENST00000524165 ATP5J2-PTCD1G3V325 749 aa22.89■■□□□ 1.25
PVT1-220ENST00000524165 ATP2B4P23634 1241 aa22.89■■□□□ 1.25
PVT1-220ENST00000524165 CAP1Q01518 475 aa22.89■■□□□ 1.25
PVT1-220ENST00000524165 TRIM28Q13263 835 aaKnown RBP22.89■■□□□ 1.25
PVT1-220ENST00000524165 RTL5Q5HYW3 569 aaPredicted RBP22.89■■□□□ 1.25
PVT1-220ENST00000524165 ANKRD13DQ6ZTN6 518 aa22.89■■□□□ 1.25
PVT1-220ENST00000524165 SASH1O94885 1247 aa22.88■■□□□ 1.25
PVT1-220ENST00000524165 HSP90B1P14625 803 aaKnown RBP22.88■■□□□ 1.25
PVT1-220ENST00000524165 STRIP1Q5VSL9 837 aa22.87■■□□□ 1.25
PVT1-220ENST00000524165 CLMNQ96JQ2 1002 aa22.87■■□□□ 1.25
PVT1-220ENST00000524165 FZD1Q9UP38 647 aa22.87■■□□□ 1.25
PVT1-220ENST00000524165 PTCH2Q9Y6C5 1203 aa22.87■■□□□ 1.25
PVT1-220ENST00000524165 TESPA1A2RU30 521 aaPredicted RBP22.86■■□□□ 1.25
PVT1-220ENST00000524165 PPP1R12BO60237 982 aaPredicted RBP22.86■■□□□ 1.25
PVT1-220ENST00000524165 MXD3Q9BW11 206 aa22.86■■□□□ 1.25
PVT1-220ENST00000524165 ECM29Q5VYK3 1845 aa22.86■■□□□ 1.25
PVT1-220ENST00000524165 MED23Q9ULK4 1368 aa22.86■■□□□ 1.25
PVT1-220ENST00000524165 MNX1P50219 401 aaPredicted RBP22.85■■□□□ 1.25
PVT1-220ENST00000524165 ZBED3Q96IU2 234 aaPredicted RBP22.85■■□□□ 1.25
PVT1-220ENST00000524165 CCDC152Q4G0S7 254 aa22.84■■□□□ 1.25
PVT1-220ENST00000524165 ZBTB38Q8NAP3 1195 aaPredicted RBP22.84■■□□□ 1.25
PVT1-220ENST00000524165 PTPN18Q99952 460 aa22.84■■□□□ 1.25
PVT1-220ENST00000524165 DEFB129Q9H1M3 183 aa22.84■■□□□ 1.25
PVT1-220ENST00000524165 PRO3102Q9H379 93 aa22.84■■□□□ 1.25
PVT1-220ENST00000524165 CHPF2Q9P2E5 772 aa22.84■■□□□ 1.25
PVT1-220ENST00000524165 SSC5DA1L4H1 1573 aa22.84■■□□□ 1.25
PVT1-220ENST00000524165 PNNQ9H307 717 aaKnown RBP22.83■■□□□ 1.25
PVT1-220ENST00000524165 PPP2R3BQ9Y5P8 575 aa22.83■■□□□ 1.25
PVT1-220ENST00000524165 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
PVT1-220ENST00000524165 TRIM26Q12899 539 aaPredicted RBP22.82■■□□□ 1.24
PVT1-220ENST00000524165 ANKRD18AQ8IVF6 992 aa22.82■■□□□ 1.24
PVT1-220ENST00000524165 DPF3Q92784 378 aa22.82■■□□□ 1.24
PVT1-220ENST00000524165 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.82■■□□□ 1.24
PVT1-220ENST00000524165 GJA5P36382 358 aa22.81■■□□□ 1.24
PVT1-220ENST00000524165 FBXW7Q969H0 707 aa22.81■■□□□ 1.24
PVT1-220ENST00000524165 COA1Q9GZY4 146 aa22.81■■□□□ 1.24
PVT1-220ENST00000524165 SUPT20HL1Q3ZLR7 823 aa22.79■■□□□ 1.24
PVT1-220ENST00000524165 DBF4Q9UBU7 674 aaPredicted RBP22.79■■□□□ 1.24
PVT1-220ENST00000524165 A0A1W2PPC1 479 aa22.78■■□□□ 1.24
PVT1-220ENST00000524165 WTIPA6NIX2 430 aaPredicted RBP22.78■■□□□ 1.24
PVT1-220ENST00000524165 PDE8AO60658 829 aa22.78■■□□□ 1.24
PVT1-220ENST00000524165 IREB2P48200 963 aaKnown RBP22.78■■□□□ 1.24
PVT1-220ENST00000524165 KIAA0825Q8IV33 1275 aa22.78■■□□□ 1.24
PVT1-220ENST00000524165 ANKRD13AQ8IZ07 590 aa22.78■■□□□ 1.24
PVT1-220ENST00000524165 PCGF6Q9BYE7 350 aa22.78■■□□□ 1.24
PVT1-220ENST00000524165 OTOFQ9HC10 1997 aa22.78■■□□□ 1.24
PVT1-220ENST00000524165 MYCP01106 439 aaPredicted RBP22.77■■□□□ 1.24
PVT1-220ENST00000524165 TTLL5Q6EMB2 1281 aa22.77■■□□□ 1.24
PVT1-220ENST00000524165 SH3TC2Q8TF17 1288 aa22.77■■□□□ 1.24
PVT1-220ENST00000524165 ZFYVE28Q9HCC9 887 aa22.77■■□□□ 1.24
PVT1-220ENST00000524165 LAMA3Q16787 3333 aa22.77■■□□□ 1.24
PVT1-220ENST00000524165 SPEF2Q9C093 1822 aa22.77■■□□□ 1.24
PVT1-220ENST00000524165 HDGFL1Q5TGJ6 251 aa22.76■■□□□ 1.23
PVT1-220ENST00000524165 MTMR14Q8NCE2 650 aa22.76■■□□□ 1.23
PVT1-220ENST00000524165 SHISA4Q96DD7 197 aa22.76■■□□□ 1.23
PVT1-220ENST00000524165 HTATIP2Q9BUP3 242 aa22.76■■□□□ 1.23
PVT1-220ENST00000524165 HYPKQ9NX55 129 aa22.76■■□□□ 1.23
PVT1-220ENST00000524165 ZNF804BA4D1E1 1349 aa22.76■■□□□ 1.23
PVT1-220ENST00000524165 USP2O75604 605 aaPredicted RBP22.75■■□□□ 1.23
PVT1-220ENST00000524165 PCCAP05165 728 aaPredicted RBP22.75■■□□□ 1.23
PVT1-220ENST00000524165 HOXB7P09629 217 aa22.75■■□□□ 1.23
PVT1-220ENST00000524165 CCT4P50991 539 aaKnown RBP22.75■■□□□ 1.23
PVT1-220ENST00000524165 RIPK4P57078 832 aa22.75■■□□□ 1.23
PVT1-220ENST00000524165 DLGAP5Q15398 846 aa22.75■■□□□ 1.23
PVT1-220ENST00000524165 TAF1CQ15572 869 aaPredicted RBP22.75■■□□□ 1.23
PVT1-220ENST00000524165 KRT24Q2M2I5 525 aa22.75■■□□□ 1.23
PVT1-220ENST00000524165 MS4A4AQ96JQ5 239 aa22.75■■□□□ 1.23
PVT1-220ENST00000524165 CDC5LQ99459 802 aaKnown RBP22.75■■□□□ 1.23
PVT1-220ENST00000524165 MINPP1Q9UNW1 487 aa22.75■■□□□ 1.23
PVT1-220ENST00000524165 GNRH1P01148 92 aa22.74■■□□□ 1.23
PVT1-220ENST00000524165 NKX2-3Q8TAU0 364 aa22.74■■□□□ 1.23
PVT1-220ENST00000524165 CCDC85AQ96PX6 553 aaPredicted RBP22.74■■□□□ 1.23
PVT1-220ENST00000524165 BSDC1Q9NW68 430 aaPredicted RBP22.74■■□□□ 1.23
PVT1-220ENST00000524165 NR2E3Q9Y5X4 410 aa22.74■■□□□ 1.23
PVT1-220ENST00000524165 MYH3P11055 1940 aa22.74■■□□□ 1.23
PVT1-220ENST00000524165 ZSWIM8A7E2V4 1837 aa22.73■■□□□ 1.23
PVT1-220ENST00000524165 PRMT2P55345 433 aa22.73■■□□□ 1.23
PVT1-220ENST00000524165 LMOD3Q0VAK6 560 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms