RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, human

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-219	ENST00000523427	FKBP1B	P68106	108 aa		33.33	■■■□□ 2.93
PVT1-219	ENST00000523427	NEXN	Q0ZGT2	675 aa		33.33	■■■□□ 2.93
PVT1-219	ENST00000523427	CWF19L2	Q2TBE0	894 aa	Known RBP	33.33	■■■□□ 2.93
PVT1-219	ENST00000523427	TSR2	Q969E8	191 aa	Known RBP	33.33	■■■□□ 2.93
PVT1-219	ENST00000523427	PITPNM2	Q9BZ72	1349 aa		33.32	■■■□□ 2.93
PVT1-219	ENST00000523427	ZNF609	O15014	1411 aa		33.32	■■■□□ 2.92
PVT1-219	ENST00000523427	OGFOD1	Q8N543	542 aa		33.32	■■■□□ 2.92
PVT1-219	ENST00000523427	BSDC1	Q9NW68	430 aa	Predicted RBP	33.32	■■■□□ 2.92
PVT1-219	ENST00000523427	CCT4	P50991	539 aa	Known RBP	33.31	■■■□□ 2.92
PVT1-219	ENST00000523427	MKRN3	Q13064	507 aa	Known RBP	33.31	■■■□□ 2.92
PVT1-219	ENST00000523427	CTU1	Q7Z7A3	348 aa	Known RBP	33.31	■■■□□ 2.92
PVT1-219	ENST00000523427	CHMP4A	Q9BY43	222 aa		33.31	■■■□□ 2.92
PVT1-219	ENST00000523427	DACT2	Q5SW24	774 aa		33.3	■■■□□ 2.92
PVT1-219	ENST00000523427	REM2	Q8IYK8	340 aa	Predicted RBP	33.3	■■■□□ 2.92
PVT1-219	ENST00000523427	STK31	Q9BXU1	1019 aa		33.3	■■■□□ 2.92
PVT1-219	ENST00000523427	MED23	Q9ULK4	1368 aa		33.3	■■■□□ 2.92
PVT1-219	ENST00000523427	UBE3B	Q7Z3V4	1068 aa		33.29	■■■□□ 2.92
PVT1-219	ENST00000523427	SASH1	O94885	1247 aa		33.28	■■■□□ 2.92
PVT1-219	ENST00000523427	TBC1D8	O95759	1140 aa		33.28	■■■□□ 2.92
PVT1-219	ENST00000523427	TXNRD3	Q86VQ6	643 aa		33.28	■■■□□ 2.92
PVT1-219	ENST00000523427	PAPPA2	Q9BXP8	1791 aa		33.27	■■■□□ 2.92
PVT1-219	ENST00000523427	PRKG1	Q13976	671 aa		33.27	■■■□□ 2.92
PVT1-219	ENST00000523427	G2E3	Q7L622	706 aa		33.27	■■■□□ 2.92
PVT1-219	ENST00000523427	HDAC9	Q9UKV0	1011 aa		33.27	■■■□□ 2.92
PVT1-219	ENST00000523427	PSME4	Q14997	1843 aa		33.27	■■■□□ 2.92
PVT1-219	ENST00000523427	NEURL1B	A8MQ27	555 aa		33.26	■■■□□ 2.91
PVT1-219	ENST00000523427	WNT10B	O00744	389 aa		33.26	■■■□□ 2.91
PVT1-219	ENST00000523427	IGHMBP2	P38935	993 aa	Known RBP	33.26	■■■□□ 2.91
PVT1-219	ENST00000523427	NF2	P35240	595 aa		33.25	■■■□□ 2.91
PVT1-219	ENST00000523427	COA1	Q9GZY4	146 aa		33.25	■■■□□ 2.91
PVT1-219	ENST00000523427	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	33.25	■■■□□ 2.91
PVT1-219	ENST00000523427	SPEF2	Q9C093	1822 aa		33.25	■■■□□ 2.91
PVT1-219	ENST00000523427	KLRK1	P26718	216 aa		33.24	■■■□□ 2.91
PVT1-219	ENST00000523427	STRIP1	Q5VSL9	837 aa		33.24	■■■□□ 2.91
PVT1-219	ENST00000523427	PDE4DIP	Q5VU43	2346 aa		33.23	■■■□□ 2.91
PVT1-219	ENST00000523427	TTLL5	Q6EMB2	1281 aa		33.23	■■■□□ 2.91
PVT1-219	ENST00000523427	KIAA0825	Q8IV33	1275 aa		33.23	■■■□□ 2.91
PVT1-219	ENST00000523427	SLC4A2	P04920	1241 aa		33.22	■■■□□ 2.91
PVT1-219	ENST00000523427	ZNF296	Q8WUU4	475 aa	Predicted RBP	33.22	■■■□□ 2.91
PVT1-219	ENST00000523427	LEMD3	Q9Y2U8	911 aa		33.22	■■■□□ 2.91
PVT1-219	ENST00000523427	ZNF804B	A4D1E1	1349 aa		33.22	■■■□□ 2.91
PVT1-219	ENST00000523427	MYO3B	Q8WXR4	1341 aa		33.22	■■■□□ 2.91
PVT1-219	ENST00000523427		H7C1W4	665 aa		33.21	■■■□□ 2.91
PVT1-219	ENST00000523427	TWISTNB	Q3B726	338 aa	Predicted RBP	33.21	■■■□□ 2.91
PVT1-219	ENST00000523427	MPHOSPH8	Q99549	860 aa		33.21	■■■□□ 2.91
PVT1-219	ENST00000523427	HPS5	Q9UPZ3	1129 aa		33.21	■■■□□ 2.91
PVT1-219	ENST00000523427	TNRC18	O15417	2968 aa	Predicted RBP	33.21	■■■□□ 2.91
PVT1-219	ENST00000523427	ITGA6	P23229	1130 aa		33.2	■■■□□ 2.91
PVT1-219	ENST00000523427	KCNJ4	P48050	445 aa		33.2	■■■□□ 2.91
PVT1-219	ENST00000523427	GTF2I	P78347	998 aa		33.2	■■■□□ 2.91
PVT1-219	ENST00000523427	PTPN12	Q05209	780 aa	Known RBP	33.18	■■■□□ 2.9
PVT1-219	ENST00000523427	ANKRD2	Q9GZV1	360 aa		33.18	■■■□□ 2.9
PVT1-219	ENST00000523427	GCKR	Q14397	625 aa		33.17	■■■□□ 2.9
PVT1-219	ENST00000523427	FZD1	Q9UP38	647 aa		33.17	■■■□□ 2.9
PVT1-219	ENST00000523427	MYH3	P11055	1940 aa		33.16	■■■□□ 2.9
PVT1-219	ENST00000523427	ARMC9	Q7Z3E5	817 aa		33.16	■■■□□ 2.9
PVT1-219	ENST00000523427	TM4SF4	P48230	202 aa		33.15	■■■□□ 2.9
PVT1-219	ENST00000523427	ANGEL1	Q9UNK9	670 aa	Known RBP	33.15	■■■□□ 2.9
PVT1-219	ENST00000523427	GPR25	O00155	361 aa		33.14	■■■□□ 2.9
PVT1-219	ENST00000523427	SNAP23	O00161	211 aa		33.14	■■■□□ 2.9
PVT1-219	ENST00000523427	FKBP5	Q13451	457 aa	Predicted RBP	33.14	■■■□□ 2.9
PVT1-219	ENST00000523427	CCDC184	Q52MB2	194 aa		33.14	■■■□□ 2.9
PVT1-219	ENST00000523427	APOBEC3F	Q8IUX4	373 aa	Known RBP	33.14	■■■□□ 2.9
PVT1-219	ENST00000523427	CHRND	Q07001	517 aa		33.13	■■■□□ 2.89
PVT1-219	ENST00000523427	FLII	Q13045	1269 aa		33.13	■■■□□ 2.89
PVT1-219	ENST00000523427	SREBF2	Q12772	1141 aa		33.12	■■■□□ 2.89
PVT1-219	ENST00000523427	PKN2	Q16513	984 aa	Known RBP	33.12	■■■□□ 2.89
PVT1-219	ENST00000523427	WWC1	Q8IX03	1113 aa		33.12	■■■□□ 2.89
PVT1-219	ENST00000523427	HELB	Q8NG08	1087 aa	Predicted RBP	33.12	■■■□□ 2.89
PVT1-219	ENST00000523427	PLA2G12B	Q9BX93	195 aa		33.12	■■■□□ 2.89
PVT1-219	ENST00000523427	MYH16	Q9H6N6	1097 aa		33.12	■■■□□ 2.89
PVT1-219	ENST00000523427	TAF5L	O75529	589 aa		33.11	■■■□□ 2.89
PVT1-219	ENST00000523427	CD209	Q9NNX6	404 aa		33.11	■■■□□ 2.89
PVT1-219	ENST00000523427	CHMP3	Q9Y3E7	222 aa		33.11	■■■□□ 2.89
PVT1-219	ENST00000523427		F8W031	263 aa	Predicted RBP	33.1	■■■□□ 2.89
PVT1-219	ENST00000523427	CASP7	P55210	303 aa		33.1	■■■□□ 2.89
PVT1-219	ENST00000523427	DLGAP5	Q15398	846 aa		33.1	■■■□□ 2.89
PVT1-219	ENST00000523427	DNAAF4	Q8WXU2	420 aa		33.1	■■■□□ 2.89
PVT1-219	ENST00000523427	R3HDML	Q9H3Y0	253 aa		33.1	■■■□□ 2.89
PVT1-219	ENST00000523427	ANKRD18B	A2A2Z9	1011 aa		33.09	■■■□□ 2.89
PVT1-219	ENST00000523427	CSF1R	P07333	972 aa		33.09	■■■□□ 2.89
PVT1-219	ENST00000523427	DEFB129	Q9H1M3	183 aa		33.08	■■■□□ 2.89
PVT1-219	ENST00000523427	PCDHAC2	Q9Y5I4	1007 aa		33.08	■■■□□ 2.89
PVT1-219	ENST00000523427	ZNF646	O15015	1829 aa	Predicted RBP	33.07	■■■□□ 2.89
PVT1-219	ENST00000523427	MMP14	P50281	582 aa		33.07	■■■□□ 2.88
PVT1-219	ENST00000523427	SPRYD7	Q5W111	196 aa		33.07	■■■□□ 2.88
PVT1-219	ENST00000523427	ZBED3	Q96IU2	234 aa	Predicted RBP	33.07	■■■□□ 2.88
PVT1-219	ENST00000523427	JAG2	Q9Y219	1238 aa		33.07	■■■□□ 2.88
PVT1-219	ENST00000523427	SALL2	Q9Y467	1007 aa	Predicted RBP	33.07	■■■□□ 2.88
PVT1-219	ENST00000523427	FKTN	O75072	461 aa		33.06	■■■□□ 2.88
PVT1-219	ENST00000523427	LDLRAD1	Q5T700	205 aa		33.06	■■■□□ 2.88
PVT1-219	ENST00000523427	CERS5	Q8N5B7	392 aa		33.06	■■■□□ 2.88
PVT1-219	ENST00000523427	LINS1	Q8NG48	757 aa		33.06	■■■□□ 2.88
PVT1-219	ENST00000523427	SLC10A4	Q96EP9	437 aa		33.06	■■■□□ 2.88
PVT1-219	ENST00000523427	CCDC27	Q2M243	656 aa		33.05	■■■□□ 2.88
PVT1-219	ENST00000523427	CLRN2	A0PK11	232 aa		33.04	■■■□□ 2.88
PVT1-219	ENST00000523427	FBXO46	Q6PJ61	603 aa	Predicted RBP	33.04	■■■□□ 2.88
PVT1-219	ENST00000523427	PLIN1	O60240	522 aa		33.03	■■■□□ 2.88
PVT1-219	ENST00000523427	IFIT5	Q13325	482 aa	Known RBP	33.03	■■■□□ 2.88
PVT1-219	ENST00000523427	CLMN	Q96JQ2	1002 aa		33.02	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms