RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 FAM182BQ5T319 152 aa30.86■■■□□ 2.53
COL13A1-214ENST00000522165 HELBQ8NG08 1087 aaPredicted RBP30.86■■■□□ 2.53
COL13A1-214ENST00000522165 LMBRD1Q9NUN5 540 aa30.85■■■□□ 2.53
COL13A1-214ENST00000522165 SMC3Q9UQE7 1217 aa30.85■■■□□ 2.53
COL13A1-214ENST00000522165 ARAP2Q8WZ64 1704 aa30.85■■■□□ 2.53
COL13A1-214ENST00000522165 WDR33Q9C0J8 1336 aaKnown RBP30.85■■■□□ 2.53
COL13A1-214ENST00000522165 CCDC102BQ68D86 513 aa30.85■■■□□ 2.53
COL13A1-214ENST00000522165 TCEANC2Q96MN5 208 aa30.85■■■□□ 2.53
COL13A1-214ENST00000522165 SCN7AQ01118 1682 aa30.84■■■□□ 2.53
COL13A1-214ENST00000522165 ARID4AP29374 1257 aaPredicted RBP30.84■■■□□ 2.53
COL13A1-214ENST00000522165 HSPA1LP34931 641 aa30.84■■■□□ 2.53
COL13A1-214ENST00000522165 ST3GAL1Q11201 340 aa30.84■■■□□ 2.53
COL13A1-214ENST00000522165 TOB2Q14106 344 aaPredicted RBP30.84■■■□□ 2.53
COL13A1-214ENST00000522165 AFF2P51816 1311 aa30.83■■■□□ 2.53
COL13A1-214ENST00000522165 RPS6KA4O75676 772 aa30.83■■■□□ 2.53
COL13A1-214ENST00000522165 UQCRFS1P1P0C7P4 283 aa30.83■■■□□ 2.53
COL13A1-214ENST00000522165 PHKA1P46020 1223 aa30.83■■■□□ 2.53
COL13A1-214ENST00000522165 IGHMBP2P38935 993 aaKnown RBP30.82■■■□□ 2.52
COL13A1-214ENST00000522165 WASHC4Q2M389 1173 aa30.82■■■□□ 2.52
COL13A1-214ENST00000522165 KLHL40Q2TBA0 621 aa30.82■■■□□ 2.52
COL13A1-214ENST00000522165 APPBP2Q92624 585 aa30.82■■■□□ 2.52
COL13A1-214ENST00000522165 MYH7P12883 1935 aa30.82■■■□□ 2.52
COL13A1-214ENST00000522165 SLC5A1P13866 664 aa30.82■■■□□ 2.52
COL13A1-214ENST00000522165 BCL2L12Q9HB09 334 aa30.82■■■□□ 2.52
COL13A1-214ENST00000522165 TTF1Q15361 905 aaPredicted RBP30.81■■■□□ 2.52
COL13A1-214ENST00000522165 ERFEQ4G0M1 354 aa30.81■■■□□ 2.52
COL13A1-214ENST00000522165 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.81■■■□□ 2.52
COL13A1-214ENST00000522165 CCNL1Q9UK58 526 aaPredicted RBP30.81■■■□□ 2.52
COL13A1-214ENST00000522165 STOX1Q6ZVD7 989 aa30.8■■■□□ 2.52
COL13A1-214ENST00000522165 SMIM5Q71RC9 77 aa30.8■■■□□ 2.52
COL13A1-214ENST00000522165 NECAB1Q8N987 351 aa30.8■■■□□ 2.52
COL13A1-214ENST00000522165 CHAMP1Q96JM3 812 aa30.8■■■□□ 2.52
COL13A1-214ENST00000522165 NARFQ9UHQ1 456 aa30.8■■■□□ 2.52
COL13A1-214ENST00000522165 DDX49Q9Y6V7 483 aaKnown RBP30.8■■■□□ 2.52
COL13A1-214ENST00000522165 ONECUT3O60422 494 aaPredicted RBP30.8■■■□□ 2.52
COL13A1-214ENST00000522165 ATRNO75882 1429 aa30.79■■■□□ 2.52
COL13A1-214ENST00000522165 SYT1P21579 422 aa30.78■■■□□ 2.52
COL13A1-214ENST00000522165 TBC1D9BQ66K14 1250 aa30.78■■■□□ 2.52
COL13A1-214ENST00000522165 ZSCAN25Q6NSZ9 544 aa30.78■■■□□ 2.52
COL13A1-214ENST00000522165 FSD2A1L4K1 749 aa30.78■■■□□ 2.52
COL13A1-214ENST00000522165 HMGB1P09429 215 aaKnown RBP30.78■■■□□ 2.52
COL13A1-214ENST00000522165 GJB2P29033 226 aa30.78■■■□□ 2.52
COL13A1-214ENST00000522165 PUS7LQ9H0K6 701 aaKnown RBP30.78■■■□□ 2.52
COL13A1-214ENST00000522165 PIH1D3Q9NQM4 214 aaKnown RBP30.78■■■□□ 2.52
COL13A1-214ENST00000522165 GNPATO15228 680 aa30.77■■■□□ 2.52
COL13A1-214ENST00000522165 STX6O43752 255 aa30.77■■■□□ 2.52
COL13A1-214ENST00000522165 PRPF40AO75400 957 aaKnown RBP30.77■■■□□ 2.52
COL13A1-214ENST00000522165 SF3B3Q15393 1217 aaKnown RBP30.77■■■□□ 2.52
COL13A1-214ENST00000522165 SBF2Q86WG5 1849 aa30.77■■■□□ 2.52
COL13A1-214ENST00000522165 FOXP2O15409 715 aa30.77■■■□□ 2.52
COL13A1-214ENST00000522165 ADD2P35612 726 aa30.77■■■□□ 2.52
COL13A1-214ENST00000522165 CDC5LQ99459 802 aaKnown RBP30.77■■■□□ 2.52
COL13A1-214ENST00000522165 LY75O60449 1722 aa30.77■■■□□ 2.52
COL13A1-214ENST00000522165 SNAP23O00161 211 aa30.76■■■□□ 2.51
COL13A1-214ENST00000522165 BICDL1Q6ZP65 573 aa30.76■■■□□ 2.51
COL13A1-214ENST00000522165 ZSCAN22P10073 491 aaPredicted RBP30.75■■■□□ 2.51
COL13A1-214ENST00000522165 C3orf67Q6ZVT6 689 aa30.75■■■□□ 2.51
COL13A1-214ENST00000522165 TRPC5Q9UL62 973 aaPredicted RBP30.75■■■□□ 2.51
COL13A1-214ENST00000522165 LAMA4Q16363 1823 aa30.75■■■□□ 2.51
COL13A1-214ENST00000522165 COL4A1P02462 1669 aa30.75■■■□□ 2.51
COL13A1-214ENST00000522165 A0A0G2JLW4 131 aa30.75■■■□□ 2.51
COL13A1-214ENST00000522165 GOLGA6L3A6NEY3 463 aa30.75■■■□□ 2.51
COL13A1-214ENST00000522165 SLC10A5Q5PT55 438 aa30.75■■■□□ 2.51
COL13A1-214ENST00000522165 L1TD1Q5T7N2 865 aaKnown RBP30.75■■■□□ 2.51
COL13A1-214ENST00000522165 Q6ZUG5 572 aa30.75■■■□□ 2.51
COL13A1-214ENST00000522165 SRP68Q9UHB9 627 aaKnown RBP30.75■■■□□ 2.51
COL13A1-214ENST00000522165 CHRNDQ07001 517 aa30.74■■■□□ 2.51
COL13A1-214ENST00000522165 CTNNA3Q9UI47 895 aa30.74■■■□□ 2.51
COL13A1-214ENST00000522165 RTCBQ9Y3I0 505 aaKnown RBP30.74■■■□□ 2.51
COL13A1-214ENST00000522165 SLC9C2Q5TAH2 1124 aa30.74■■■□□ 2.51
COL13A1-214ENST00000522165 DHX32Q7L7V1 743 aaKnown RBP30.74■■■□□ 2.51
COL13A1-214ENST00000522165 SEPT12Q8IYM1 358 aa30.74■■■□□ 2.51
COL13A1-214ENST00000522165 TAF1LQ8IZX4 1826 aa30.73■■■□□ 2.51
COL13A1-214ENST00000522165 E7EWF7 191 aa30.73■■■□□ 2.51
COL13A1-214ENST00000522165 ZPR1O75312 459 aa30.73■■■□□ 2.51
COL13A1-214ENST00000522165 UBE3CQ15386 1083 aa30.73■■■□□ 2.51
COL13A1-214ENST00000522165 TTLL5Q6EMB2 1281 aa30.73■■■□□ 2.51
COL13A1-214ENST00000522165 GPAA1O43292 621 aa30.72■■■□□ 2.51
COL13A1-214ENST00000522165 SPATA5Q8NB90 893 aa30.72■■■□□ 2.51
COL13A1-214ENST00000522165 IDH1O75874 414 aaKnown RBP30.72■■■□□ 2.51
COL13A1-214ENST00000522165 NYXQ9GZU5 481 aa30.72■■■□□ 2.51
COL13A1-214ENST00000522165 MYO5AQ9Y4I1 1855 aaKnown RBP30.71■■■□□ 2.51
COL13A1-214ENST00000522165 EXOSC10Q01780 885 aaKnown RBP30.71■■■□□ 2.51
COL13A1-214ENST00000522165 RASGRF1Q13972 1273 aa30.71■■■□□ 2.51
COL13A1-214ENST00000522165 SETDB2Q96T68 719 aa30.71■■■□□ 2.51
COL13A1-214ENST00000522165 CASZ1Q86V15 1759 aa30.71■■■□□ 2.51
COL13A1-214ENST00000522165 COL24A1Q17RW2 1714 aa30.71■■■□□ 2.51
COL13A1-214ENST00000522165 GTF2E1P29083 439 aaPredicted RBP30.7■■■□□ 2.51
COL13A1-214ENST00000522165 AMIGO3Q86WK7 504 aa30.7■■■□□ 2.51
COL13A1-214ENST00000522165 ANKRD18AQ8IVF6 992 aa30.7■■■□□ 2.51
COL13A1-214ENST00000522165 DTNBO60941 627 aa30.69■■■□□ 2.5
COL13A1-214ENST00000522165 FGAP02671 866 aa30.69■■■□□ 2.5
COL13A1-214ENST00000522165 PDE6AP16499 860 aa30.69■■■□□ 2.5
COL13A1-214ENST00000522165 ARHGEF1Q92888 912 aaKnown RBP30.69■■■□□ 2.5
COL13A1-214ENST00000522165 F13A1P00488 732 aa30.69■■■□□ 2.5
COL13A1-214ENST00000522165 GPT2Q8TD30 523 aa30.69■■■□□ 2.5
COL13A1-214ENST00000522165 ISY1Q9ULR0 285 aaKnown RBP30.69■■■□□ 2.5
COL13A1-214ENST00000522165 MTMR6Q9Y217 621 aa30.69■■■□□ 2.5
COL13A1-214ENST00000522165 ZNF532Q9HCE3 1301 aa30.68■■■□□ 2.5
COL13A1-214ENST00000522165 TCRBV5S4A2TA0A5A2 114 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms