RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 HELLSQ9NRZ9 838 aa13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 THRAP3Q9Y2W1 955 aaKnown RBP13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 RGS12O14924 1447 aa13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 CCDC196A0A1B0GTZ2 297 aa13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 SMTNL1A8MU46 457 aa13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 IRS4O14654 1257 aaPredicted RBP13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 STX1AQ16623 288 aa13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 TLR7Q9NYK1 1049 aaKnown RBP13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 TYRO3Q06418 890 aa13.1□□□□□ -0.31
PCDHGB4-201ENST00000519479 ADCK5Q3MIX3 580 aa13.09□□□□□ -0.31
PCDHGB4-201ENST00000519479 ARHGEF28Q8N1W1 1705 aaKnown RBP13.09□□□□□ -0.31
PCDHGB4-201ENST00000519479 JCADQ9P266 1359 aa13.09□□□□□ -0.31
PCDHGB4-201ENST00000519479 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
PCDHGB4-201ENST00000519479 PI4K2BQ8TCG2 481 aa13.09□□□□□ -0.31
PCDHGB4-201ENST00000519479 RANBP6O60518 1105 aaKnown RBP13.09□□□□□ -0.31
PCDHGB4-201ENST00000519479 SSRP1Q08945 709 aaKnown RBP13.09□□□□□ -0.31
PCDHGB4-201ENST00000519479 TTLL7Q6ZT98 887 aa13.09□□□□□ -0.31
PCDHGB4-201ENST00000519479 ZSWIM6Q9HCJ5 1215 aa13.09□□□□□ -0.31
PCDHGB4-201ENST00000519479 NOL7Q9UMY1 257 aaKnown RBP13.09□□□□□ -0.31
PCDHGB4-201ENST00000519479 CUL4AQ13619 759 aa13.08□□□□□ -0.31
PCDHGB4-201ENST00000519479 MFSD6Q6ZSS7 791 aa13.08□□□□□ -0.31
PCDHGB4-201ENST00000519479 DNAJC25Q9H1X3 360 aa13.08□□□□□ -0.31
PCDHGB4-201ENST00000519479 RNF41Q9H4P4 317 aaPredicted RBP13.08□□□□□ -0.31
PCDHGB4-201ENST00000519479 DCAF8L1A6NGE4 600 aa13.08□□□□□ -0.32
PCDHGB4-201ENST00000519479 IPO7O95373 1038 aaKnown RBP13.08□□□□□ -0.32
PCDHGB4-201ENST00000519479 CAVIN2O95810 425 aa13.08□□□□□ -0.32
PCDHGB4-201ENST00000519479 CFAP100Q494V2 611 aa13.08□□□□□ -0.32
PCDHGB4-201ENST00000519479 ACSBG1Q96GR2 724 aa13.08□□□□□ -0.32
PCDHGB4-201ENST00000519479 IQSEC3Q9UPP2 1182 aaPredicted RBP13.08□□□□□ -0.32
PCDHGB4-201ENST00000519479 ATP6V1AP38606 617 aa13.08□□□□□ -0.32
PCDHGB4-201ENST00000519479 TXLNAP40222 546 aa13.08□□□□□ -0.32
PCDHGB4-201ENST00000519479 CDC37L1Q7L3B6 337 aa13.08□□□□□ -0.32
PCDHGB4-201ENST00000519479 SEC62Q99442 399 aaKnown RBP13.08□□□□□ -0.32
PCDHGB4-201ENST00000519479 DACH1Q9UI36 760 aa13.08□□□□□ -0.32
PCDHGB4-201ENST00000519479 AXIN2Q9Y2T1 843 aa13.08□□□□□ -0.32
PCDHGB4-201ENST00000519479 DNAJC10Q8IXB1 793 aa13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 CDC5LQ99459 802 aaKnown RBP13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 SLC26A6Q9BXS9 759 aa13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 COPRSQ9NQ92 184 aa13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 TPCN1Q9ULQ1 816 aa13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 ZBTB43O43298 467 aa13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 CBFA2T2O43439 604 aa13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 FAM98CQ17RN3 349 aaKnown RBP13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 XAGE2Q96GT9 111 aa13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 NCOA5Q9HCD5 579 aaKnown RBP13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 JAK2O60674 1132 aa13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 CCDC152Q4G0S7 254 aa13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 FILIP1LQ4L180 1135 aa13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 ALG1Q9BT22 464 aa13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 DBNLQ9UJU6 430 aaKnown RBP13.07□□□□□ -0.32
PCDHGB4-201ENST00000519479 TRIM34Q9BYJ4 488 aa13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 CLSTN1O94985 981 aa13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 SFPQP23246 707 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 DHX8Q14562 1220 aaKnown RBP13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 ISM2Q6H9L7 571 aa13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 IQCA1Q86XH1 822 aa13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 MRPS27Q92552 414 aaKnown RBP13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 MAP4K1Q92918 833 aa13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 C16orf45Q96MC5 204 aaPredicted RBP13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 ITGA6P23229 1130 aa13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 CEP131Q9UPN4 1083 aa13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 SPATA31A6Q5VVP1 1343 aa13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 SASH1O94885 1247 aa13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 NOLC1Q14978 699 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 KCNG4Q8TDN1 519 aa13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 MTMR6Q9Y217 621 aa13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
PCDHGB4-201ENST00000519479 CCP110O43303 1012 aa13.05□□□□□ -0.32
PCDHGB4-201ENST00000519479 CCDC186Q7Z3E2 898 aa13.05□□□□□ -0.32
PCDHGB4-201ENST00000519479 LUZP1Q86V48 1076 aa13.05□□□□□ -0.32
PCDHGB4-201ENST00000519479 CNNM3Q8NE01 707 aa13.05□□□□□ -0.32
PCDHGB4-201ENST00000519479 NIP7Q9Y221 180 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCDHGB4-201ENST00000519479 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCDHGB4-201ENST00000519479 ATP10DQ9P241 1426 aa13.05□□□□□ -0.32
PCDHGB4-201ENST00000519479 OFD1O75665 1012 aa13.05□□□□□ -0.32
PCDHGB4-201ENST00000519479 FAM177A1Q8N128 213 aaPredicted RBP13.05□□□□□ -0.32
PCDHGB4-201ENST00000519479 MARCKSP29966 332 aaPredicted RBP13.04□□□□□ -0.32
PCDHGB4-201ENST00000519479 RFC4P35249 363 aa13.04□□□□□ -0.32
PCDHGB4-201ENST00000519479 SLC4A4Q9Y6R1 1079 aa13.04□□□□□ -0.32
PCDHGB4-201ENST00000519479 PTPN14Q15678 1187 aa13.04□□□□□ -0.32
PCDHGB4-201ENST00000519479 CTCFLQ8NI51 663 aaPredicted RBP13.04□□□□□ -0.32
PCDHGB4-201ENST00000519479 SOS2Q07890 1332 aaPredicted RBP13.04□□□□□ -0.32
PCDHGB4-201ENST00000519479 RXRAP19793 462 aa13.04□□□□□ -0.32
PCDHGB4-201ENST00000519479 TCIRG1Q13488 830 aa13.04□□□□□ -0.32
PCDHGB4-201ENST00000519479 TTLL5Q6EMB2 1281 aa13.04□□□□□ -0.32
PCDHGB4-201ENST00000519479 LEO1Q8WVC0 666 aaPredicted RBP13.04□□□□□ -0.32
PCDHGB4-201ENST00000519479 HAUS7Q99871 368 aa13.04□□□□□ -0.32
PCDHGB4-201ENST00000519479 UTP14AQ9BVJ6 771 aaKnown RBP13.04□□□□□ -0.32
PCDHGB4-201ENST00000519479 TAF5LO75529 589 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 CYP7A1P22680 504 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 WTAPQ15007 396 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 LRRC24Q50LG9 513 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 APPBP2Q92624 585 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 ARGLU1Q9NWB6 273 aaPredicted RBP13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 TRMT1Q9NXH9 659 aaKnown RBP13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 SPTLC2O15270 562 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 TNNT1P13805 278 aa13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 ZNF589Q86UQ0 364 aaPredicted RBP13.03□□□□□ -0.32
PCDHGB4-201ENST00000519479 LLPHQ9BRT6 129 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms