RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 PTPRCP08575 1304 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 ZC3H4Q9UPT8 1303 aaKnown RBP7.38□□□□□ -1.23
CD47-205ENST00000517766 ZBTB7CA1YPR0 619 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 AKAP4Q5JQC9 854 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 NBPF6Q5VWK0 638 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 PDXDC2PQ6P474 469 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 DEPDC4Q8N2C3 294 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 TMEM57Q8N5G2 664 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 ARMC2Q8NEN0 867 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 ADAM32Q8TC27 787 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 ANKRD24Q8TF21 1146 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 FOXJ1Q92949 421 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 PBXIP1Q96AQ6 731 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 NBPF4Q96M43 638 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 ARHGAP9Q9BRR9 750 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 TNNQ9UQP3 1299 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 MAFBQ9Y5Q3 323 aaPredicted RBP7.38□□□□□ -1.23
CD47-205ENST00000517766 SIPA1L3O60292 1781 aaPredicted RBP7.38□□□□□ -1.23
CD47-205ENST00000517766 SCN11AQ9UI33 1791 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 NHSL1Q5SYE7 1610 aa7.38□□□□□ -1.23
CD47-205ENST00000517766 ABCC4O15439 1325 aa7.37□□□□□ -1.23
CD47-205ENST00000517766 SPATA31A3Q5VYP0 1347 aa7.37□□□□□ -1.23
CD47-205ENST00000517766 ELL2O00472 640 aaPredicted RBP7.37□□□□□ -1.23
CD47-205ENST00000517766 IGHDP01880 384 aa7.37□□□□□ -1.23
CD47-205ENST00000517766 SKIP12755 728 aa7.37□□□□□ -1.23
CD47-205ENST00000517766 RPIAP49247 311 aa7.37□□□□□ -1.23
CD47-205ENST00000517766 HDAC1Q13547 482 aaPredicted RBP7.37□□□□□ -1.23
CD47-205ENST00000517766 AGERQ15109 404 aa7.37□□□□□ -1.23
CD47-205ENST00000517766 TAF7Q15545 349 aaPredicted RBP7.37□□□□□ -1.23
CD47-205ENST00000517766 NBPF14Q5TI25 921 aa7.37□□□□□ -1.23
CD47-205ENST00000517766 ZBTB33Q86T24 672 aa7.37□□□□□ -1.23
CD47-205ENST00000517766 FAM174AQ8TBP5 190 aa7.37□□□□□ -1.23
CD47-205ENST00000517766 BACH2Q9BYV9 841 aa7.37□□□□□ -1.23
CD47-205ENST00000517766 ADAMTS7Q9UKP4 1686 aa7.37□□□□□ -1.23
CD47-205ENST00000517766 CPDO75976 1380 aa7.36□□□□□ -1.23
CD47-205ENST00000517766 CEMIPQ8WUJ3 1361 aa7.36□□□□□ -1.23
CD47-205ENST00000517766 ABCA3Q99758 1704 aa7.36□□□□□ -1.23
CD47-205ENST00000517766 FOXK2Q01167 660 aa7.36□□□□□ -1.23
CD47-205ENST00000517766 C1orf141Q5JVX7 400 aa7.36□□□□□ -1.23
CD47-205ENST00000517766 USHBP1Q8N6Y0 703 aa7.36□□□□□ -1.23
CD47-205ENST00000517766 ZBTB40Q9NUA8 1239 aa7.36□□□□□ -1.23
CD47-205ENST00000517766 PODXL2Q9NZ53 605 aa7.36□□□□□ -1.23
CD47-205ENST00000517766 CEP126Q9P2H0 1117 aa7.36□□□□□ -1.23
CD47-205ENST00000517766 PKD1L3Q7Z443 1732 aa7.35□□□□□ -1.23
CD47-205ENST00000517766 PARP4Q9UKK3 1724 aaKnown RBP7.35□□□□□ -1.23
CD47-205ENST00000517766 ZNF335Q9H4Z2 1342 aaPredicted RBP7.35□□□□□ -1.23
CD47-205ENST00000517766 ZBTB7BO15156 539 aaPredicted RBP7.35□□□□□ -1.23
CD47-205ENST00000517766 ATP9BO43861 1147 aa7.35□□□□□ -1.23
CD47-205ENST00000517766 HOXB7P09629 217 aa7.35□□□□□ -1.23
CD47-205ENST00000517766 VSIG8P0DPA2 414 aa7.35□□□□□ -1.23
CD47-205ENST00000517766 ANP32AP39687 249 aaKnown RBP7.35□□□□□ -1.23
CD47-205ENST00000517766 TSGA10IPQ3SY00 556 aa7.35□□□□□ -1.23
CD47-205ENST00000517766 CCDC30Q5VVM6 783 aa7.35□□□□□ -1.23
CD47-205ENST00000517766 INTS3Q68E01 1043 aaKnown RBP7.35□□□□□ -1.23
CD47-205ENST00000517766 BRINP3Q76B58 766 aa7.35□□□□□ -1.23
CD47-205ENST00000517766 SH3BP5LQ7L8J4 393 aa7.35□□□□□ -1.23
CD47-205ENST00000517766 IL17REQ8NFR9 667 aa7.35□□□□□ -1.23
CD47-205ENST00000517766 LRRC59Q96AG4 307 aaKnown RBP7.35□□□□□ -1.23
CD47-205ENST00000517766 STK31Q9BXU1 1019 aa7.35□□□□□ -1.23
CD47-205ENST00000517766 SOS2Q07890 1332 aaPredicted RBP7.34□□□□□ -1.23
CD47-205ENST00000517766 RGS3P49796 1198 aa7.34□□□□□ -1.23
CD47-205ENST00000517766 ZC3H6P61129 1189 aaKnown RBP7.34□□□□□ -1.23
CD47-205ENST00000517766 TEFQ10587 303 aa7.34□□□□□ -1.23
CD47-205ENST00000517766 C4orf48Q5BLP8 95 aa7.34□□□□□ -1.23
CD47-205ENST00000517766 ZNF530Q6P9A1 599 aaPredicted RBP7.34□□□□□ -1.23
CD47-205ENST00000517766 HPS1Q92902 700 aa7.34□□□□□ -1.23
CD47-205ENST00000517766 GCC1Q96CN9 775 aa7.34□□□□□ -1.23
CD47-205ENST00000517766 SLAIN2Q9P270 581 aa7.34□□□□□ -1.23
CD47-205ENST00000517766 PXDNLA1KZ92 1463 aa7.33□□□□□ -1.24
CD47-205ENST00000517766 TATP17735 454 aaPredicted RBP7.33□□□□□ -1.24
CD47-205ENST00000517766 CCT4P50991 539 aaKnown RBP7.33□□□□□ -1.24
CD47-205ENST00000517766 SLFNL1Q499Z3 407 aa7.33□□□□□ -1.24
CD47-205ENST00000517766 DZIP3Q86Y13 1208 aaKnown RBP7.33□□□□□ -1.24
CD47-205ENST00000517766 RNF135Q8IUD6 432 aa7.33□□□□□ -1.24
CD47-205ENST00000517766 SMC5Q8IY18 1101 aa7.33□□□□□ -1.24
CD47-205ENST00000517766 RAPGEF4Q8WZA2 1011 aa7.33□□□□□ -1.24
CD47-205ENST00000517766 GPKOWQ92917 476 aaPredicted RBP eCLIP7.33□□□□□ -1.242e-6■■■□□ 15.9
CD47-205ENST00000517766 MIS18AQ9NYP9 233 aa7.33□□□□□ -1.24
CD47-205ENST00000517766 SPG7Q9UQ90 795 aa7.33□□□□□ -1.24
CD47-205ENST00000517766 GPSM3Q9Y4H4 160 aa7.33□□□□□ -1.24
CD47-205ENST00000517766 USP17L3A6NCW0 530 aa7.32□□□□□ -1.24
CD47-205ENST00000517766 USP17L4A6NCW7 530 aa7.32□□□□□ -1.24
CD47-205ENST00000517766 J3QL48 77 aa7.32□□□□□ -1.24
CD47-205ENST00000517766 RNMTO43148 476 aaKnown RBP7.32□□□□□ -1.24
CD47-205ENST00000517766 CSB-PGBD3P0DP91 1061 aa7.32□□□□□ -1.24
CD47-205ENST00000517766 KRT24Q2M2I5 525 aa7.32□□□□□ -1.24
CD47-205ENST00000517766 USP17L2Q6R6M4 530 aa7.32□□□□□ -1.24
CD47-205ENST00000517766 USP17L1Q7RTZ2 530 aa7.32□□□□□ -1.24
CD47-205ENST00000517766 ZNF511Q8NB15 262 aa7.32□□□□□ -1.24
CD47-205ENST00000517766 DDX17Q92841 729 aaKnown RBP7.32□□□□□ -1.24
CD47-205ENST00000517766 VRTNQ9H8Y1 702 aa7.32□□□□□ -1.24
CD47-205ENST00000517766 RGS12O14924 1447 aa7.32□□□□□ -1.24
CD47-205ENST00000517766 USP17L5A8MUK1 530 aa7.31□□□□□ -1.24
CD47-205ENST00000517766 CD2BP2O95400 341 aaKnown RBP7.31□□□□□ -1.24
CD47-205ENST00000517766 HSP90AB1P08238 724 aaKnown RBP7.31□□□□□ -1.24
CD47-205ENST00000517766 EIF4A1P60842 406 aaKnown RBP7.31□□□□□ -1.24
CD47-205ENST00000517766 SH3BP2P78314 561 aa7.31□□□□□ -1.24
CD47-205ENST00000517766 C8orf34Q49A92 452 aa7.31□□□□□ -1.24
CD47-205ENST00000517766 SH3RF1Q7Z6J0 888 aa7.31□□□□□ -1.24
CD47-205ENST00000517766 KRTAP19-1Q8IUB9 90 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms