RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 IFRD2Q12894 506 aaPredicted RBP3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 SQSTM1Q13501 440 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 TRIP4Q15650 581 aaPredicted RBP3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 MAP3K11Q16584 847 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 TNNI3KQ59H18 835 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 IER5Q5VY09 327 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 TMEM214Q6NUQ4 689 aaKnown RBP3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 CCDC81Q6ZN84 652 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 FMNL3Q8IVF7 1028 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 C1orf127Q8N9H9 656 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 ZNF280CQ8ND82 737 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 ANKRD24Q8TF21 1146 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 NKD1Q969G9 470 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 KIFC2Q96AC6 838 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 KLRG1Q96E93 195 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 SHDQ96IW2 340 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 SUSD3Q96L08 255 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 NLRP3Q96P20 1036 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 CHRDQ9H2X0 955 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 TMEM260Q9NX78 707 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 PPP4R2Q9NY27 417 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 CNTN3Q9P232 1028 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 GABBR1Q9UBS5 961 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 RTCBQ9Y3I0 505 aaKnown RBP3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 SUPT16HQ9Y5B9 1047 aaKnown RBP3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 WASF2Q9Y6W5 498 aa3.5□□□□□ -1.85
SCARNA3-201ENST00000517097 CAPN5O15484 640 aaPredicted RBP3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 PDPK1O15530 556 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 FBXO24O75426 580 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 PF4P02776 101 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 RLBP1P12271 317 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 HCLS1P14317 486 aaPredicted RBP3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 PLA2G4AP47712 749 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 FCGRTP55899 365 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 FAM160A1Q05DH4 1040 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 RASGRF1Q13972 1273 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 TKFCQ3LXA3 575 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 KIAA0319Q5VV43 1072 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 NBPF10Q6P3W6 841 aaKnown RBP3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 C16orf86Q6ZW13 317 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 FERMT3Q86UX7 667 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 SLITRK4Q8IW52 837 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 CCDC146Q8IYE0 955 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 FAM169BQ8N8A8 192 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 PHC3Q8NDX5 983 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 JDP2Q8WYK2 163 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 HSH2DQ96JZ2 352 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 ST7Q9NRC1 585 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 UBP1Q9NZI7 540 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 PRR12Q9ULL5 1215 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 TRAK1Q9UPV9 953 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 TLR6Q9Y2C9 796 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 LEMD3Q9Y2U8 911 aa3.49□□□□□ -1.85
SCARNA3-201ENST00000517097 A0A1W2PP55 124 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 GTF2E1P29083 439 aaPredicted RBP3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 INPP5BP32019 993 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 CRKP46108 304 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 VEGFBP49765 207 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 LIG3P49916 1009 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 LMNB2Q03252 620 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 APOBRQ0VD83 1088 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 GRIN2CQ14957 1233 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 DDR2Q16832 855 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 TAF7LQ5H9L4 462 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 SNAP47Q5SQN1 464 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 ODR4Q5SWX8 454 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 PRPF40BQ6NWY9 871 aaKnown RBP3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 SV2BQ7L1I2 683 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 CCAR1Q8IX12 1150 aaKnown RBP3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 SMC5Q8IY18 1101 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 PGBD3Q8N328 593 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 PRPF38AQ8NAV1 312 aaKnown RBP3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 GOLM1Q8NBJ4 401 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 PMM1Q92871 262 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 PMEPA1Q969W9 287 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 AIDAQ96BJ3 306 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 SGSM3Q96HU1 749 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 FEZ1Q99689 392 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 IER2Q9BTL4 223 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 OXCT2Q9BYC2 517 aaPredicted RBP3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 EHD4Q9H223 541 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 PRDM16Q9HAZ2 1276 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 HOMER2Q9NSB8 354 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 ABI2Q9NYB9 513 aaPredicted RBP3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 ZDHHC3Q9NYG2 299 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 ACTR10Q9NZ32 417 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 PPM1HQ9ULR3 514 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 AKAP2Q9Y2D5 859 aa3.48□□□□□ -1.85
SCARNA3-201ENST00000517097 TRIM37O94972 964 aa3.47□□□□□ -1.85
SCARNA3-201ENST00000517097 VIL1P09327 827 aaKnown RBP3.47□□□□□ -1.85
SCARNA3-201ENST00000517097 CES1P23141 567 aa3.47□□□□□ -1.85
SCARNA3-201ENST00000517097 GRNP28799 593 aaKnown RBP3.47□□□□□ -1.85
SCARNA3-201ENST00000517097 EIF6P56537 245 aaKnown RBP3.47□□□□□ -1.85
SCARNA3-201ENST00000517097 TBX4P57082 545 aa3.47□□□□□ -1.85
SCARNA3-201ENST00000517097 EVA1CP58658 441 aa3.47□□□□□ -1.85
SCARNA3-201ENST00000517097 INSM1Q01101 510 aaPredicted RBP3.47□□□□□ -1.85
SCARNA3-201ENST00000517097 RELBQ01201 579 aa3.47□□□□□ -1.85
SCARNA3-201ENST00000517097 NNTQ13423 1086 aa3.47□□□□□ -1.85
SCARNA3-201ENST00000517097 CAMK2GQ13555 558 aaPredicted RBP3.47□□□□□ -1.85
SCARNA3-201ENST00000517097 SEPT6Q14141 434 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms