RNA–Protein interactions for RNA: ENST00000515794.1

AFDN-222, Transcript of afadin, adherens junction formation factor, human

TSL 3

Gene AFDN, Length 746 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFDN-222	ENST00000515794	RTKN2	Q8IZC4	609 aa		12.22	□□□□□ -0.45
AFDN-222	ENST00000515794	MTR	Q99707	1265 aa		12.22	□□□□□ -0.45
AFDN-222	ENST00000515794	PCDHB15	Q9Y5E8	787 aa		12.22	□□□□□ -0.45
AFDN-222	ENST00000515794	CSPP1	Q1MSJ5	1256 aa		12.21	□□□□□ -0.45
AFDN-222	ENST00000515794	NBPF10	Q6P3W6	841 aa	Known RBP	12.21	□□□□□ -0.45
AFDN-222	ENST00000515794	NBPF15	Q8N660	670 aa		12.21	□□□□□ -0.45
AFDN-222	ENST00000515794	NYX	Q9GZU5	481 aa		12.21	□□□□□ -0.45
AFDN-222	ENST00000515794	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.21	□□□□□ -0.45
AFDN-222	ENST00000515794	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.21	□□□□□ -0.45
AFDN-222	ENST00000515794	PRAMEF22	A3QJZ6	481 aa		12.2	□□□□□ -0.46
AFDN-222	ENST00000515794	TJAP1	Q5JTD0	557 aa		12.2	□□□□□ -0.46
AFDN-222	ENST00000515794	CC2D2B	Q6DHV5	1058 aa		12.2	□□□□□ -0.46
AFDN-222	ENST00000515794	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.2	□□□□□ -0.46
AFDN-222	ENST00000515794	AFDN	P55196	1824 aa	Known RBP	12.2	□□□□□ -0.46
AFDN-222	ENST00000515794	SCN7A	Q01118	1682 aa		12.19	□□□□□ -0.46
AFDN-222	ENST00000515794	ERBB4	Q15303	1308 aa		12.19	□□□□□ -0.46
AFDN-222	ENST00000515794	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.19	□□□□□ -0.46
AFDN-222	ENST00000515794	DCTN1	Q14203	1278 aa		12.19	□□□□□ -0.46
AFDN-222	ENST00000515794	CCDC24	Q8N4L8	307 aa		12.19	□□□□□ -0.46
AFDN-222	ENST00000515794	PLEKHF1	Q96S99	279 aa		12.19	□□□□□ -0.46
AFDN-222	ENST00000515794	IL21	Q9HBE4	155 aa		12.19	□□□□□ -0.46
AFDN-222	ENST00000515794	BABAM1	Q9NWV8	329 aa		12.19	□□□□□ -0.46
AFDN-222	ENST00000515794	DLEC1	Q9Y238	1755 aa		12.19	□□□□□ -0.46
AFDN-222	ENST00000515794	SIPA1L3	O60292	1781 aa	Predicted RBP	12.18	□□□□□ -0.46
AFDN-222	ENST00000515794	GTF2E1	P29083	439 aa	Predicted RBP	12.18	□□□□□ -0.46
AFDN-222	ENST00000515794	EIF4A1	P60842	406 aa	Known RBP	12.18	□□□□□ -0.46
AFDN-222	ENST00000515794	HTRA3	P83110	453 aa		12.18	□□□□□ -0.46
AFDN-222	ENST00000515794	NFE2L2	Q16236	605 aa		12.18	□□□□□ -0.46
AFDN-222	ENST00000515794		Q3C1V9	767 aa		12.18	□□□□□ -0.46
AFDN-222	ENST00000515794	CRY2	Q49AN0	593 aa		12.18	□□□□□ -0.46
AFDN-222	ENST00000515794	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.18	□□□□□ -0.46
AFDN-222	ENST00000515794	SBF1	O95248	1867 aa		12.17	□□□□□ -0.46
AFDN-222	ENST00000515794	DDN	O94850	711 aa	Predicted RBP	12.17	□□□□□ -0.46
AFDN-222	ENST00000515794	HOXA10	P31260	410 aa	Predicted RBP	12.17	□□□□□ -0.46
AFDN-222	ENST00000515794	PIP4K2A	P48426	406 aa	Predicted RBP	12.17	□□□□□ -0.46
AFDN-222	ENST00000515794	PRPF38B	Q5VTL8	546 aa	Known RBP	12.17	□□□□□ -0.46
AFDN-222	ENST00000515794	LDHD	Q86WU2	507 aa		12.17	□□□□□ -0.46
AFDN-222	ENST00000515794	PSMD1	Q99460	953 aa		12.17	□□□□□ -0.46
AFDN-222	ENST00000515794	SALL2	Q9Y467	1007 aa	Predicted RBP	12.17	□□□□□ -0.46
AFDN-222	ENST00000515794	RIC1	Q4ADV7	1423 aa		12.17	□□□□□ -0.46
AFDN-222	ENST00000515794	WDR90	Q96KV7	1748 aa		12.17	□□□□□ -0.46
AFDN-222	ENST00000515794	MAP3K15	Q6ZN16	1313 aa		12.16	□□□□□ -0.46
AFDN-222	ENST00000515794	LILRB3	O75022	631 aa		12.16	□□□□□ -0.46
AFDN-222	ENST00000515794	HLF	Q16534	295 aa		12.16	□□□□□ -0.46
AFDN-222	ENST00000515794	QPCT	Q16769	361 aa		12.16	□□□□□ -0.46
AFDN-222	ENST00000515794	KIF6	Q6ZMV9	814 aa		12.16	□□□□□ -0.46
AFDN-222	ENST00000515794	ZNF516	Q92618	1163 aa		12.16	□□□□□ -0.46
AFDN-222	ENST00000515794	SYMPK	Q92797	1274 aa	Known RBP	12.16	□□□□□ -0.46
AFDN-222	ENST00000515794	ZBTB3	Q9H5J0	574 aa		12.16	□□□□□ -0.46
AFDN-222	ENST00000515794	C6orf229	H3BNL8	230 aa		12.15	□□□□□ -0.46
AFDN-222	ENST00000515794	FZD9	O00144	591 aa		12.15	□□□□□ -0.46
AFDN-222	ENST00000515794	FMNL1	O95466	1100 aa	Predicted RBP	12.15	□□□□□ -0.46
AFDN-222	ENST00000515794	MTMR2	Q13614	643 aa		12.15	□□□□□ -0.46
AFDN-222	ENST00000515794	BRICD5	Q6PL45	260 aa		12.15	□□□□□ -0.46
AFDN-222	ENST00000515794	RNF19B	Q6ZMZ0	732 aa		12.15	□□□□□ -0.46
AFDN-222	ENST00000515794	PNMA8A	Q86V59	439 aa	Predicted RBP	12.15	□□□□□ -0.46
AFDN-222	ENST00000515794	THAP11	Q96EK4	314 aa		12.15	□□□□□ -0.46
AFDN-222	ENST00000515794	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.15	□□□□□ -0.46
AFDN-222	ENST00000515794	MAPK8IP3	Q9UPT6	1336 aa		12.14	□□□□□ -0.47
AFDN-222	ENST00000515794	RALBP1	Q15311	655 aa		12.14	□□□□□ -0.47
AFDN-222	ENST00000515794	PARP10	Q53GL7	1025 aa		12.14	□□□□□ -0.47
AFDN-222	ENST00000515794	GPC2	Q8N158	579 aa		12.14	□□□□□ -0.47
AFDN-222	ENST00000515794	JDP2	Q8WYK2	163 aa		12.14	□□□□□ -0.47
AFDN-222	ENST00000515794	CRAMP1	Q96RY5	1269 aa		12.14	□□□□□ -0.47
AFDN-222	ENST00000515794	VPS33B	Q9H267	617 aa		12.14	□□□□□ -0.47
AFDN-222	ENST00000515794	MIS18A	Q9NYP9	233 aa		12.14	□□□□□ -0.47
AFDN-222	ENST00000515794	HACL1	Q9UJ83	578 aa		12.14	□□□□□ -0.47
AFDN-222	ENST00000515794	RNF123	Q5XPI4	1314 aa		12.13	□□□□□ -0.47
AFDN-222	ENST00000515794	IARS	P41252	1262 aa	Known RBP	12.13	□□□□□ -0.47
AFDN-222	ENST00000515794	LMOD3	Q0VAK6	560 aa		12.13	□□□□□ -0.47
AFDN-222	ENST00000515794	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.13	□□□□□ -0.47
AFDN-222	ENST00000515794	PPP2R2D	Q66LE6	453 aa		12.13	□□□□□ -0.47
AFDN-222	ENST00000515794	PPP1R42	Q7Z4L9	355 aa		12.13	□□□□□ -0.47
AFDN-222	ENST00000515794	ZNF34	Q8IZ26	560 aa		12.13	□□□□□ -0.47
AFDN-222	ENST00000515794	SYNE4	Q8N205	404 aa		12.13	□□□□□ -0.47
AFDN-222	ENST00000515794	RPGR	Q92834	1020 aa	Known RBP	12.13	□□□□□ -0.47
AFDN-222	ENST00000515794	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.13	□□□□□ -0.47
AFDN-222	ENST00000515794	RRP7A	Q9Y3A4	280 aa	Known RBP	12.13	□□□□□ -0.47
AFDN-222	ENST00000515794	PASK	Q96RG2	1323 aa		12.12	□□□□□ -0.47
AFDN-222	ENST00000515794	ANKRD31	Q8N7Z5	1873 aa		12.12	□□□□□ -0.47
AFDN-222	ENST00000515794	SPDYE5	A6NIY4	337 aa		12.12	□□□□□ -0.47
AFDN-222	ENST00000515794	ITGBL1	O95965	494 aa	Predicted RBP	12.12	□□□□□ -0.47
AFDN-222	ENST00000515794	KCNC4	Q03721	635 aa		12.12	□□□□□ -0.47
AFDN-222	ENST00000515794	RTL5	Q5HYW3	569 aa	Predicted RBP	12.12	□□□□□ -0.47
AFDN-222	ENST00000515794	SLC10A5	Q5PT55	438 aa		12.12	□□□□□ -0.47
AFDN-222	ENST00000515794	RBM17	Q96I25	401 aa	Known RBP	12.12	□□□□□ -0.47
AFDN-222	ENST00000515794	VIRMA	Q69YN4	1812 aa	Known RBP	12.11	□□□□□ -0.47
AFDN-222	ENST00000515794	FER1L6	Q2WGJ9	1857 aa		12.11	□□□□□ -0.47
AFDN-222	ENST00000515794	BCOR	Q6W2J9	1755 aa		12.11	□□□□□ -0.47
AFDN-222	ENST00000515794	TMEM88B	A6NKF7	163 aa		12.11	□□□□□ -0.47
AFDN-222	ENST00000515794	FAM177B	A6PVY3	158 aa		12.11	□□□□□ -0.47
AFDN-222	ENST00000515794	TLL1	O43897	1013 aa		12.11	□□□□□ -0.47
AFDN-222	ENST00000515794	HSPA1A	P0DMV8	641 aa	Known RBP	12.11	□□□□□ -0.47
AFDN-222	ENST00000515794	HSPA1B	P0DMV9	641 aa	Known RBP	12.11	□□□□□ -0.47
AFDN-222	ENST00000515794	EPHX2	P34913	555 aa		12.11	□□□□□ -0.47
AFDN-222	ENST00000515794	TTLL7	Q6ZT98	887 aa		12.11	□□□□□ -0.47
AFDN-222	ENST00000515794	RETREG3	Q86VR2	466 aa		12.11	□□□□□ -0.47
AFDN-222	ENST00000515794	SPSB2	Q99619	263 aa		12.11	□□□□□ -0.47
AFDN-222	ENST00000515794	TMX4	Q9H1E5	349 aa	Predicted RBP	12.11	□□□□□ -0.47
AFDN-222	ENST00000515794	PLSCR2	Q9NRY7	297 aa		12.11	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms