RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 GSDMDP57764 484 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 CBX1P83916 185 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 NECTIN1Q15223 517 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 STX1AQ16623 288 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 TPD52L1Q16890 204 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 TSGA10IPQ3SY00 556 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 KMT5BQ4FZB7 885 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 BEND3Q5T5X7 828 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 CREB3L3Q68CJ9 461 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 PRPF40BQ6NWY9 871 aaKnown RBP5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 LMOD2Q6P5Q4 547 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 SARM1Q6SZW1 724 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 PLA2G4DQ86XP0 818 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 SPC24Q8NBT2 197 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 NGDNQ8NEJ9 315 aaKnown RBP5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 BICD2Q8TD16 824 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 MRFAP1L1Q96HT8 127 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 LLPHQ9BRT6 129 aaKnown RBP5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 NAT10Q9H0A0 1025 aaKnown RBP5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 KCNF1Q9H3M0 494 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 IL21Q9HBE4 155 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 PYCARDQ9ULZ3 195 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 MRVI1Q9Y6F6 885 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 A0A0G2JS52 829 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 CCDC66A2RUB6 948 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 CCP110O43303 1012 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 HMGB1P09429 215 aaKnown RBP5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 TNNT1P13805 278 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 PTGS1P23219 599 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 RPS6KB1P23443 525 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 TPM4P67936 248 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 MAP2K5Q13163 448 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 G3BP1Q13283 466 aaKnown RBP eCLIP5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 ZRSR1Q15695 479 aaKnown RBP5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 ME3Q16798 604 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 SLFNL1Q499Z3 407 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 ANO6Q4KMQ2 910 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 TJAP1Q5JTD0 557 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 ZSCAN25Q6NSZ9 544 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 CCDC186Q7Z3E2 898 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 TTC6Q86TZ1 520 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 ZNF397Q8NF99 534 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 LEO1Q8WVC0 666 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 MAP4K1Q92918 833 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 ZNF396Q96N95 335 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 MTRQ99707 1265 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 ARID3AQ99856 593 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 CBX8Q9HC52 389 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 KCND1Q9NSA2 647 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 C9orf78Q9NZ63 289 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 DBF4Q9UBU7 674 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 CLIP2Q9UDT6 1046 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 SPG7Q9UQ90 795 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 RBM8AQ9Y5S9 174 aaKnown RBP5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 EID1Q9Y6B2 187 aa5.83□□□□□ -1.48
HMGB3P16-201ENST00000508037 OVOS2A0A0G2JMS6 1433 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 NCAPD2Q15021 1401 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 CEMIPQ8WUJ3 1361 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 BECN2A8MW95 431 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 H3BQV1 296 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 SLC27A2O14975 620 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 MAP4K4O95819 1239 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 EIF4A1P60842 406 aaKnown RBP5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 RBM6P78332 1123 aaKnown RBP5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 PTPN14Q15678 1187 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 AMOTQ4VCS5 1084 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 CEP135Q66GS9 1140 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 NAA16Q6N069 864 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 CCDC73Q6ZRK6 1079 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 AACSQ86V21 672 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 LUZP1Q86V48 1076 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 CEP57L1Q8IYX8 460 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 KRT222Q8N1A0 295 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 C17orf53Q8N3J3 647 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 IL17REQ8NFR9 667 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 KIF18AQ8NI77 898 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 ERO1AQ96HE7 468 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 PRDM10Q9NQV6 1147 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 ANO10Q9NW15 660 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 DACT1Q9NYF0 836 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 IMPACTQ9P2X3 320 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 PCDHB3Q9Y5E6 796 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 MORC2Q9Y6X9 1032 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 SLIT1O75093 1534 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 ADAMTS13Q76LX8 1427 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 USP54Q70EL1 1684 aa5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 RIMS1Q86UR5 1692 aaKnown RBP5.82□□□□□ -1.48
HMGB3P16-201ENST00000508037 DIP2BQ9P265 1576 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 CEP170BQ9Y4F5 1589 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 PI4KAP2A4QPH2 592 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 IRF6O14896 467 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 KINO60870 393 aaKnown RBP5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 RGS20O76081 388 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 LARGE1O95461 756 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 CFHP08603 1231 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 TPM1P09493 284 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 LIG1P18858 919 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 HOXC9P31274 260 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 KCNJ6P48051 423 aa5.81□□□□□ -1.48
HMGB3P16-201ENST00000508037 PTH1RQ03431 593 aa5.81□□□□□ -1.48
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