RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 ZNF280AP59817 542 aaPredicted RBP7.57□□□□□ -1.2
GYPB-205ENST00000505583 GNAI1P63096 354 aa7.57□□□□□ -1.2
GYPB-205ENST00000505583 DGKZQ13574 1117 aa7.57□□□□□ -1.2
GYPB-205ENST00000505583 SCARF1Q14162 830 aa7.57□□□□□ -1.2
GYPB-205ENST00000505583 ANGEL2Q5VTE6 544 aaKnown RBP7.57□□□□□ -1.2
GYPB-205ENST00000505583 MOB2Q70IA6 237 aa7.57□□□□□ -1.2
GYPB-205ENST00000505583 G2E3Q7L622 706 aa7.57□□□□□ -1.2
GYPB-205ENST00000505583 TSR2Q969E8 191 aaKnown RBP7.57□□□□□ -1.2
GYPB-205ENST00000505583 CDCA5Q96FF9 252 aa7.57□□□□□ -1.2
GYPB-205ENST00000505583 CWC25Q9NXE8 425 aaPredicted RBP7.57□□□□□ -1.2
GYPB-205ENST00000505583 GGA1Q9UJY5 639 aa7.57□□□□□ -1.2
GYPB-205ENST00000505583 TAOK2Q9UL54 1235 aa7.57□□□□□ -1.2
GYPB-205ENST00000505583 CIZ1Q9ULV3 898 aaPredicted RBP7.57□□□□□ -1.2
GYPB-205ENST00000505583 MAP3K2Q9Y2U5 619 aa7.57□□□□□ -1.2
GYPB-205ENST00000505583 ZNF609O15014 1411 aa7.57□□□□□ -1.2
GYPB-205ENST00000505583 A0A1B0GUL6 1792 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 PI4KAP2A4QPH2 592 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 TRPA1O75762 1119 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 PRR29P0C7W0 189 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 KLRK1P26718 216 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 ZNF157P51786 506 aaPredicted RBP7.56□□□□□ -1.2
GYPB-205ENST00000505583 CWF19L2Q2TBE0 894 aaKnown RBP7.56□□□□□ -1.2
GYPB-205ENST00000505583 CCDC152Q4G0S7 254 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 PRAMEF18Q5VWM3 479 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 RSBN1LQ6PCB5 846 aaPredicted RBP7.56□□□□□ -1.2
GYPB-205ENST00000505583 TXNRD3Q86VQ6 643 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 SULF1Q8IWU6 871 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 PI4KAP1Q8N8J0 262 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 C2orf69Q8N8R5 385 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 TTLL11Q8NHH1 800 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 CSRNP1Q96S65 589 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 GREM2Q9H772 168 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 RNF186Q9NXI6 227 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 PAPPA2Q9BXP8 1791 aa7.56□□□□□ -1.2
GYPB-205ENST00000505583 XDHP47989 1333 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 G3V3G9 751 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 SLC10A3P09131 477 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 USP17L8P0C7I0 530 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 CTSWP56202 376 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 MLLT1Q03111 559 aaPredicted RBP7.55□□□□□ -1.2
GYPB-205ENST00000505583 NBPF9Q3BBW0 867 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 DCAF8Q5TAQ9 597 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 CCDC30Q5VVM6 783 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 KSR2Q6VAB6 950 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 RASAL3Q86YV0 1011 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 ANKRD18AQ8IVF6 992 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 SPRYD3Q8NCJ5 442 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 AGBL3Q8NEM8 1001 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 CCDC102AQ96A19 550 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 MYOZ2Q9NPC6 264 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 MINPP1Q9UNW1 487 aa7.55□□□□□ -1.2
GYPB-205ENST00000505583 USP17L3A6NCW0 530 aa7.54□□□□□ -1.2
GYPB-205ENST00000505583 USP17L4A6NCW7 530 aa7.54□□□□□ -1.2
GYPB-205ENST00000505583 NEURL1BA8MQ27 555 aa7.54□□□□□ -1.2
GYPB-205ENST00000505583 UBE2Q2LH0YL09 131 aa7.54□□□□□ -1.2
GYPB-205ENST00000505583 ATP2B4P23634 1241 aa7.54□□□□□ -1.2
GYPB-205ENST00000505583 DACT2Q5SW24 774 aa7.54□□□□□ -1.2
GYPB-205ENST00000505583 USP17L1Q7RTZ2 530 aa7.54□□□□□ -1.2
GYPB-205ENST00000505583 MED23Q9ULK4 1368 aa7.54□□□□□ -1.2
GYPB-205ENST00000505583 H7C1W4 665 aa7.53□□□□□ -1.2
GYPB-205ENST00000505583 SNAP23O00161 211 aa7.53□□□□□ -1.2
GYPB-205ENST00000505583 TNRC18O15417 2968 aaPredicted RBP7.53□□□□□ -1.2
GYPB-205ENST00000505583 SASH1O94885 1247 aa7.53□□□□□ -1.2
GYPB-205ENST00000505583 SLC34A2O95436 690 aa7.53□□□□□ -1.2
GYPB-205ENST00000505583 DDX58O95786 925 aaKnown RBP7.53□□□□□ -1.2
GYPB-205ENST00000505583 CCT4P50991 539 aaKnown RBP7.53□□□□□ -1.2
GYPB-205ENST00000505583 CASP7P55210 303 aa7.53□□□□□ -1.2
GYPB-205ENST00000505583 CALD1Q05682 793 aaKnown RBP7.53□□□□□ -1.2
GYPB-205ENST00000505583 UBE3BQ7Z3V4 1068 aa7.53□□□□□ -1.2
GYPB-205ENST00000505583 PODNQ7Z5L7 613 aa7.53□□□□□ -1.2
GYPB-205ENST00000505583 WWC1Q8IX03 1113 aa7.53□□□□□ -1.2
GYPB-205ENST00000505583 CDC5LQ99459 802 aaKnown RBP7.53□□□□□ -1.2
GYPB-205ENST00000505583 BSDC1Q9NW68 430 aaPredicted RBP7.53□□□□□ -1.2
GYPB-205ENST00000505583 SAGE1Q9NXZ1 904 aa7.53□□□□□ -1.2
GYPB-205ENST00000505583 FZD1Q9UP38 647 aa7.53□□□□□ -1.2
GYPB-205ENST00000505583 PITPNM2Q9BZ72 1349 aa7.52□□□□□ -1.2
GYPB-205ENST00000505583 WNT10BO00744 389 aa7.52□□□□□ -1.21
GYPB-205ENST00000505583 PRKCSHP14314 528 aaPredicted RBP7.52□□□□□ -1.21
GYPB-205ENST00000505583 HSP90B1P14625 803 aaKnown RBP7.52□□□□□ -1.21
GYPB-205ENST00000505583 SOX10P56693 466 aa7.52□□□□□ -1.21
GYPB-205ENST00000505583 GCKRQ14397 625 aa7.52□□□□□ -1.21
GYPB-205ENST00000505583 TWISTNBQ3B726 338 aaPredicted RBP7.52□□□□□ -1.21
GYPB-205ENST00000505583 FBXW7Q969H0 707 aa7.52□□□□□ -1.21
GYPB-205ENST00000505583 PCDHAC2Q9Y5I4 1007 aa7.52□□□□□ -1.21
GYPB-205ENST00000505583 ECM29Q5VYK3 1845 aa7.52□□□□□ -1.21
GYPB-205ENST00000505583 IRS2Q9Y4H2 1338 aa7.52□□□□□ -1.21
GYPB-205ENST00000505583 TBC1D8O95759 1140 aa7.51□□□□□ -1.21
GYPB-205ENST00000505583 ITGA6P23229 1130 aa7.51□□□□□ -1.21
GYPB-205ENST00000505583 NUBP1P53384 320 aa7.51□□□□□ -1.21
GYPB-205ENST00000505583 MKRN3Q13064 507 aaKnown RBP7.51□□□□□ -1.21
GYPB-205ENST00000505583 PRKG1Q13976 671 aa7.51□□□□□ -1.21
GYPB-205ENST00000505583 STRIP1Q5VSL9 837 aa7.51□□□□□ -1.21
GYPB-205ENST00000505583 KIAA0825Q8IV33 1275 aa7.51□□□□□ -1.21
GYPB-205ENST00000505583 CERS5Q8N5B7 392 aa7.51□□□□□ -1.21
GYPB-205ENST00000505583 ZBED3Q96IU2 234 aaPredicted RBP7.51□□□□□ -1.21
GYPB-205ENST00000505583 STK31Q9BXU1 1019 aa7.51□□□□□ -1.21
GYPB-205ENST00000505583 R3HDMLQ9H3Y0 253 aa7.51□□□□□ -1.21
GYPB-205ENST00000505583 CACNA1FO60840 1977 aa7.51□□□□□ -1.21
GYPB-205ENST00000505583 ZNF804BA4D1E1 1349 aa7.51□□□□□ -1.21
GYPB-205ENST00000505583 AOX1Q06278 1338 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms