RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 RAD50Q92878 1312 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 SERPINC1P01008 464 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 KRT18P05783 430 aaKnown RBP16.4■□□□□ 0.22
TCOF1-207ENST00000504761 PTH1RQ03431 593 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 USPL1Q5W0Q7 1092 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 FSIP1Q8NA03 581 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 LPIN2Q92539 896 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 QTRT2Q9H974 415 aaKnown RBP16.4■□□□□ 0.22
TCOF1-207ENST00000504761 ERBB4Q15303 1308 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 PRDM1O75626 825 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 APBA3O96018 575 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 ATP5JP18859 108 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 FILIP1Q7Z7B0 1213 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 KAT14Q9H8E8 782 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 CCDC39Q9UFE4 941 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 DBNLQ9UJU6 430 aaKnown RBP16.4■□□□□ 0.22
TCOF1-207ENST00000504761 HEG1Q9ULI3 1381 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 PREX1Q8TCU6 1659 aa16.4■□□□□ 0.22
TCOF1-207ENST00000504761 ZNF804AQ7Z570 1209 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 PTCH1Q13635 1447 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 UFL1O94874 794 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 PCCAP05165 728 aaPredicted RBP16.39■□□□□ 0.21
TCOF1-207ENST00000504761 CCDC173Q0VFZ6 552 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 AOX1Q06278 1338 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 MYO3AQ8NEV4 1616 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 B4E1Z4 1266 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 BIN1O00499 593 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 CCDC183Q5T5S1 534 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 ALG1Q9BT22 464 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 KRT23Q9C075 422 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 IPO7O95373 1038 aaKnown RBP16.39■□□□□ 0.21
TCOF1-207ENST00000504761 IGKV5-2P06315 115 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 HIBADHP31937 336 aaKnown RBP16.39■□□□□ 0.21
TCOF1-207ENST00000504761 IFIT1BQ5T764 474 aaKnown RBP16.39■□□□□ 0.21
TCOF1-207ENST00000504761 USP48Q86UV5 1035 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 APPBP2Q92624 585 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 NCOA5Q9HCD5 579 aaKnown RBP16.39■□□□□ 0.21
TCOF1-207ENST00000504761 COPRSQ9NQ92 184 aa16.39■□□□□ 0.21
TCOF1-207ENST00000504761 MED14O60244 1454 aa16.38■□□□□ 0.21
TCOF1-207ENST00000504761 FAM173BQ6P4H8 233 aa16.38■□□□□ 0.21
TCOF1-207ENST00000504761 HELLSQ9NRZ9 838 aa16.38■□□□□ 0.21
TCOF1-207ENST00000504761 LAMC1P11047 1609 aa16.38■□□□□ 0.21
TCOF1-207ENST00000504761 LDHBP07195 334 aaKnown RBP16.38■□□□□ 0.21
TCOF1-207ENST00000504761 SYT1P21579 422 aa16.38■□□□□ 0.21
TCOF1-207ENST00000504761 ADORA1P30542 326 aa16.38■□□□□ 0.21
TCOF1-207ENST00000504761 EPHA10Q5JZY3 1008 aa16.38■□□□□ 0.21
TCOF1-207ENST00000504761 ISM2Q6H9L7 571 aa16.38■□□□□ 0.21
TCOF1-207ENST00000504761 CEP57L1Q8IYX8 460 aa16.38■□□□□ 0.21
TCOF1-207ENST00000504761 ANKRD2Q9GZV1 360 aa16.38■□□□□ 0.21
TCOF1-207ENST00000504761 VWDEQ8N2E2 1590 aa16.38■□□□□ 0.21
TCOF1-207ENST00000504761 RPS8P62241 208 aaKnown RBP16.38■□□□□ 0.21
TCOF1-207ENST00000504761 TSPY3P0CV98 308 aa16.37■□□□□ 0.21
TCOF1-207ENST00000504761 TSPY8P0CW00 308 aa16.37■□□□□ 0.21
TCOF1-207ENST00000504761 RAB3GAP1Q15042 981 aa16.37■□□□□ 0.21
TCOF1-207ENST00000504761 GIMAP6Q6P9H5 292 aa16.37■□□□□ 0.21
TCOF1-207ENST00000504761 SYNE4Q8N205 404 aa16.37■□□□□ 0.21
TCOF1-207ENST00000504761 F13A1P00488 732 aa16.37■□□□□ 0.21
TCOF1-207ENST00000504761 GYG1P46976 350 aa16.37■□□□□ 0.21
TCOF1-207ENST00000504761 RTN1Q16799 776 aa16.37■□□□□ 0.21
TCOF1-207ENST00000504761 KLHL40Q2TBA0 621 aa16.37■□□□□ 0.21
TCOF1-207ENST00000504761 MSL1Q68DK7 614 aa16.37■□□□□ 0.21
TCOF1-207ENST00000504761 TNS3Q68CZ2 1445 aa16.37■□□□□ 0.21
TCOF1-207ENST00000504761 TTLL5Q6EMB2 1281 aa16.37■□□□□ 0.21
TCOF1-207ENST00000504761 SEC31BQ9NQW1 1179 aa16.37■□□□□ 0.21
TCOF1-207ENST00000504761 OVOS2A0A0J9YW53 1432 aa16.36■□□□□ 0.21
TCOF1-207ENST00000504761 OVOS2Q6IE36 1432 aa16.36■□□□□ 0.21
TCOF1-207ENST00000504761 TRIM37O94972 964 aa16.36■□□□□ 0.21
TCOF1-207ENST00000504761 BCAMP50895 628 aa16.36■□□□□ 0.21
TCOF1-207ENST00000504761 KLHL10Q6JEL2 608 aa16.36■□□□□ 0.21
TCOF1-207ENST00000504761 CCDC194A0A1B0GVG4 234 aa16.36■□□□□ 0.21
TCOF1-207ENST00000504761 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
TCOF1-207ENST00000504761 IL6STP40189 918 aaPredicted RBP16.36■□□□□ 0.21
TCOF1-207ENST00000504761 CNNM2Q9H8M5 875 aa16.36■□□□□ 0.21
TCOF1-207ENST00000504761 ZNF532Q9HCE3 1301 aa16.36■□□□□ 0.21
TCOF1-207ENST00000504761 DLC1Q96QB1 1528 aa16.36■□□□□ 0.21
TCOF1-207ENST00000504761 HSPA4P34932 840 aa16.36■□□□□ 0.21
TCOF1-207ENST00000504761 GSTO1P78417 241 aa16.36■□□□□ 0.21
TCOF1-207ENST00000504761 HLFQ16534 295 aa16.36■□□□□ 0.21
TCOF1-207ENST00000504761 SPATA5Q8NB90 893 aa16.36■□□□□ 0.21
TCOF1-207ENST00000504761 MROH2AA6NES4 1674 aa16.35■□□□□ 0.21
TCOF1-207ENST00000504761 RPS6KB1P23443 525 aa16.35■□□□□ 0.21
TCOF1-207ENST00000504761 ZNF76P36508 570 aa16.35■□□□□ 0.21
TCOF1-207ENST00000504761 R3HCC1Q9Y3T6 440 aaKnown RBP16.35■□□□□ 0.21
TCOF1-207ENST00000504761 UBE2HP62256 183 aa16.35■□□□□ 0.21
TCOF1-207ENST00000504761 PI16Q6UXB8 463 aa16.35■□□□□ 0.21
TCOF1-207ENST00000504761 ATG3Q9NT62 314 aa16.35■□□□□ 0.21
TCOF1-207ENST00000504761 USP25Q9UHP3 1055 aa16.35■□□□□ 0.21
TCOF1-207ENST00000504761 SASH1O94885 1247 aa16.35■□□□□ 0.21
TCOF1-207ENST00000504761 MARCKSP29966 332 aaPredicted RBP16.35■□□□□ 0.21
TCOF1-207ENST00000504761 PTPN12Q05209 780 aaKnown RBP16.35■□□□□ 0.21
TCOF1-207ENST00000504761 FAM196AQ6ZSG2 479 aa16.35■□□□□ 0.21
TCOF1-207ENST00000504761 DENND2AQ9ULE3 1009 aa16.35■□□□□ 0.21
TCOF1-207ENST00000504761 KIF5BP33176 963 aa16.34■□□□□ 0.21
TCOF1-207ENST00000504761 CCAR1Q8IX12 1150 aaKnown RBP16.34■□□□□ 0.21
TCOF1-207ENST00000504761 AATFQ9NY61 560 aaKnown RBP eCLIP16.34■□□□□ 0.21
TCOF1-207ENST00000504761 CCDC102BQ68D86 513 aa16.34■□□□□ 0.21
TCOF1-207ENST00000504761 NLRP10Q86W26 655 aa16.34■□□□□ 0.21
TCOF1-207ENST00000504761 HLA-DOAP06340 250 aa16.34■□□□□ 0.21
TCOF1-207ENST00000504761 PHKA1P46020 1223 aa16.34■□□□□ 0.21
TCOF1-207ENST00000504761 SAP30BPQ9UHR5 308 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms