RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 CIAPIN1Q6FI81 312 aa11.89□□□□□ -0.51
DHFR-202ENST00000504396 NECTIN2Q92692 538 aa11.89□□□□□ -0.51
DHFR-202ENST00000504396 ARIH1Q9Y4X5 557 aaPredicted RBP11.89□□□□□ -0.51
DHFR-202ENST00000504396 ANKRD36CQ5JPF3 1778 aa11.89□□□□□ -0.51
DHFR-202ENST00000504396 MAP2K2P36507 400 aa11.88□□□□□ -0.51
DHFR-202ENST00000504396 AIMP1Q12904 312 aaKnown RBP11.88□□□□□ -0.51
DHFR-202ENST00000504396 TNIP1Q15025 636 aa11.88□□□□□ -0.51
DHFR-202ENST00000504396 DDX46Q7L014 1031 aaKnown RBP11.88□□□□□ -0.51
DHFR-202ENST00000504396 SAPCD2Q86UD0 394 aa11.88□□□□□ -0.51
DHFR-202ENST00000504396 MPNDQ8N594 471 aa11.88□□□□□ -0.51
DHFR-202ENST00000504396 ZNF428Q96B54 188 aa11.88□□□□□ -0.51
DHFR-202ENST00000504396 SPDYE16A6NNV3 312 aaPredicted RBP11.87□□□□□ -0.51
DHFR-202ENST00000504396 CA12O43570 354 aa11.87□□□□□ -0.51
DHFR-202ENST00000504396 HCLS1P14317 486 aaPredicted RBP11.87□□□□□ -0.51
DHFR-202ENST00000504396 PTPREP23469 700 aa11.87□□□□□ -0.51
DHFR-202ENST00000504396 TYW1BQ6NUM6 668 aa11.87□□□□□ -0.51
DHFR-202ENST00000504396 ADGRD1Q6QNK2 874 aa11.87□□□□□ -0.51
DHFR-202ENST00000504396 BBOX1O75936 387 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 PROSER3Q2NL68 480 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 HSP90AB3PQ58FF7 597 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 SP8Q8IXZ3 490 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 TRPM4Q8TD43 1214 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 KCNV2Q8TDN2 545 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 PLEKHF1Q96S99 279 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 CDHR2Q9BYE9 1310 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 BABAM1Q9NWV8 329 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 TRMT112Q9UI30 125 aaKnown RBP11.86□□□□□ -0.51
DHFR-202ENST00000504396 H7C1D1 291 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 BRPF1P55201 1214 aaPredicted RBP11.86□□□□□ -0.51
DHFR-202ENST00000504396 KIAA2012Q0VF49 1180 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 DGKZQ13574 1117 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 GRAPQ13588 217 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 SLC10A5Q5PT55 438 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 CDC37L1Q7L3B6 337 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 GRAPLQ8TC17 118 aaPredicted RBP11.86□□□□□ -0.51
DHFR-202ENST00000504396 RTFDC1Q9BY42 306 aaPredicted RBP11.86□□□□□ -0.51
DHFR-202ENST00000504396 MCOLN1Q9GZU1 580 aa11.86□□□□□ -0.51
DHFR-202ENST00000504396 CNOT7Q9UIV1 285 aaKnown RBP11.86□□□□□ -0.51
DHFR-202ENST00000504396 TAF1P21675 1872 aa11.85□□□□□ -0.51
DHFR-202ENST00000504396 SH3TC1Q8TE82 1336 aa11.85□□□□□ -0.51
DHFR-202ENST00000504396 CASP8AP2Q9UKL3 1982 aa11.85□□□□□ -0.51
DHFR-202ENST00000504396 SHTN1A0MZ66 631 aa11.85□□□□□ -0.51
DHFR-202ENST00000504396 HUNKP57058 714 aa11.85□□□□□ -0.51
DHFR-202ENST00000504396 COPS6Q7L5N1 327 aa11.85□□□□□ -0.51
DHFR-202ENST00000504396 USP48Q86UV5 1035 aa11.85□□□□□ -0.51
DHFR-202ENST00000504396 NLRP10Q86W26 655 aa11.85□□□□□ -0.51
DHFR-202ENST00000504396 XAGE3Q8WTP9 111 aa11.85□□□□□ -0.51
DHFR-202ENST00000504396 FBXW7Q969H0 707 aa11.85□□□□□ -0.51
DHFR-202ENST00000504396 HIRAP54198 1017 aaPredicted RBP11.84□□□□□ -0.51
DHFR-202ENST00000504396 RIPK4P57078 832 aa11.84□□□□□ -0.51
DHFR-202ENST00000504396 ZC3H15Q8WU90 426 aaKnown RBP11.84□□□□□ -0.51
DHFR-202ENST00000504396 HHIPL1Q96JK4 782 aa11.84□□□□□ -0.51
DHFR-202ENST00000504396 EPAS1Q99814 870 aa11.84□□□□□ -0.51
DHFR-202ENST00000504396 DBNDD1Q9H9R9 158 aa11.84□□□□□ -0.51
DHFR-202ENST00000504396 YDJCA8MPS7 323 aa11.83□□□□□ -0.52
DHFR-202ENST00000504396 C6orf229H3BNL8 230 aa11.83□□□□□ -0.52
DHFR-202ENST00000504396 TK2O00142 265 aa11.83□□□□□ -0.52
DHFR-202ENST00000504396 LMOD3Q0VAK6 560 aa11.83□□□□□ -0.52
DHFR-202ENST00000504396 NOGQ13253 232 aa11.83□□□□□ -0.52
DHFR-202ENST00000504396 TBC1D10BQ4KMP7 808 aaPredicted RBP11.83□□□□□ -0.52
DHFR-202ENST00000504396 RBM26Q5T8P6 1007 aaKnown RBP11.83□□□□□ -0.52
DHFR-202ENST00000504396 SAMD7Q7Z3H4 446 aa11.83□□□□□ -0.52
DHFR-202ENST00000504396 NSFL1CQ9UNZ2 370 aaKnown RBP11.83□□□□□ -0.52
DHFR-202ENST00000504396 LAS1LQ9Y4W2 734 aaKnown RBP11.83□□□□□ -0.52
DHFR-202ENST00000504396 DUOX1Q9NRD9 1551 aa11.83□□□□□ -0.52
DHFR-202ENST00000504396 PSMD14O00487 310 aa11.82□□□□□ -0.52
DHFR-202ENST00000504396 TCIRG1Q13488 830 aa11.82□□□□□ -0.52
DHFR-202ENST00000504396 NBR1Q14596 966 aa11.82□□□□□ -0.52
DHFR-202ENST00000504396 NEUROD2Q15784 382 aa11.82□□□□□ -0.52
DHFR-202ENST00000504396 WASHC4Q2M389 1173 aa11.82□□□□□ -0.52
DHFR-202ENST00000504396 DLK2Q6UY11 383 aa11.82□□□□□ -0.52
DHFR-202ENST00000504396 KRT26Q7Z3Y9 468 aa11.82□□□□□ -0.52
DHFR-202ENST00000504396 TMC4Q7Z404 712 aa11.82□□□□□ -0.52
DHFR-202ENST00000504396 LRP10Q7Z4F1 713 aa11.82□□□□□ -0.52
DHFR-202ENST00000504396 RNF166Q96A37 237 aaPredicted RBP11.82□□□□□ -0.52
DHFR-202ENST00000504396 PGAP2Q9UHJ9 254 aa11.82□□□□□ -0.52
DHFR-202ENST00000504396 LRRC37AA6NMS7 1700 aa11.82□□□□□ -0.52
DHFR-202ENST00000504396 DDX60Q8IY21 1712 aaKnown RBP11.82□□□□□ -0.52
DHFR-202ENST00000504396 ADM5C9JUS6 153 aa11.81□□□□□ -0.52
DHFR-202ENST00000504396 RTL5Q5HYW3 569 aaPredicted RBP11.81□□□□□ -0.52
DHFR-202ENST00000504396 C2orf69Q8N8R5 385 aa11.81□□□□□ -0.52
DHFR-202ENST00000504396 DCPSQ96C86 337 aaKnown RBP11.81□□□□□ -0.52
DHFR-202ENST00000504396 ZIC5Q96T25 663 aa11.81□□□□□ -0.52
DHFR-202ENST00000504396 GRXCR2A6NFK2 248 aa11.8□□□□□ -0.52
DHFR-202ENST00000504396 RGS19P49795 217 aa11.8□□□□□ -0.52
DHFR-202ENST00000504396 ZNF157P51786 506 aaPredicted RBP11.8□□□□□ -0.52
DHFR-202ENST00000504396 RGMBQ6NW40 437 aa11.8□□□□□ -0.52
DHFR-202ENST00000504396 EYA3Q99504 573 aa11.8□□□□□ -0.52
DHFR-202ENST00000504396 GBA2Q9HCG7 927 aaPredicted RBP11.8□□□□□ -0.52
DHFR-202ENST00000504396 CHPF2Q9P2E5 772 aa11.8□□□□□ -0.52
DHFR-202ENST00000504396 VPS9D1Q9Y2B5 631 aa11.8□□□□□ -0.52
DHFR-202ENST00000504396 ATP5J2-PTCD1G3V325 749 aa11.79□□□□□ -0.52
DHFR-202ENST00000504396 ECE2O60344 883 aa11.79□□□□□ -0.52
DHFR-202ENST00000504396 KRT24Q2M2I5 525 aa11.79□□□□□ -0.52
DHFR-202ENST00000504396 HDGFL1Q5TGJ6 251 aa11.79□□□□□ -0.52
DHFR-202ENST00000504396 CELF1Q92879 486 aaKnown RBP11.79□□□□□ -0.52
DHFR-202ENST00000504396 FAM89AQ96GI7 184 aa11.79□□□□□ -0.52
DHFR-202ENST00000504396 HRO43593 1189 aa11.78□□□□□ -0.52
DHFR-202ENST00000504396 EGFRP00533 1210 aa11.78□□□□□ -0.52
DHFR-202ENST00000504396 COL9A1P20849 921 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms