RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 TBC1D8O95759 1140 aa18.9■□□□□ 0.62
SEC61A1-207ENST00000498837 DDX58O95786 925 aaKnown RBP18.9■□□□□ 0.62
SEC61A1-207ENST00000498837 DACT2Q5SW24 774 aa18.9■□□□□ 0.62
SEC61A1-207ENST00000498837 CCDC30Q5VVM6 783 aa18.9■□□□□ 0.62
SEC61A1-207ENST00000498837 CDC5LQ99459 802 aaKnown RBP18.9■□□□□ 0.62
SEC61A1-207ENST00000498837 GREM2Q9H772 168 aa18.9■□□□□ 0.62
SEC61A1-207ENST00000498837 MED23Q9ULK4 1368 aa18.9■□□□□ 0.62
SEC61A1-207ENST00000498837 CCT4P50991 539 aaKnown RBP18.89■□□□□ 0.61
SEC61A1-207ENST00000498837 TSPYL6Q8N831 410 aa18.89■□□□□ 0.61
SEC61A1-207ENST00000498837 FBXW7Q969H0 707 aa18.89■□□□□ 0.61
SEC61A1-207ENST00000498837 BSDC1Q9NW68 430 aaPredicted RBP18.89■□□□□ 0.61
SEC61A1-207ENST00000498837 ECM29Q5VYK3 1845 aa18.88■□□□□ 0.61
SEC61A1-207ENST00000498837 CACNA1FO60840 1977 aa18.88■□□□□ 0.61
SEC61A1-207ENST00000498837 PI4KAP2A4QPH2 592 aa18.88■□□□□ 0.61
SEC61A1-207ENST00000498837 WNT10BO00744 389 aa18.88■□□□□ 0.61
SEC61A1-207ENST00000498837 CALD1Q05682 793 aaKnown RBP18.88■□□□□ 0.61
SEC61A1-207ENST00000498837 TTLL12Q14166 644 aaPredicted RBP18.88■□□□□ 0.61
SEC61A1-207ENST00000498837 KSR2Q6VAB6 950 aa18.88■□□□□ 0.61
SEC61A1-207ENST00000498837 TXNRD3Q86VQ6 643 aa18.88■□□□□ 0.61
SEC61A1-207ENST00000498837 PI4KAP1Q8N8J0 262 aa18.88■□□□□ 0.61
SEC61A1-207ENST00000498837 ZNF296Q8WUU4 475 aaPredicted RBP18.88■□□□□ 0.61
SEC61A1-207ENST00000498837 HPS5Q9UPZ3 1129 aa18.88■□□□□ 0.61
SEC61A1-207ENST00000498837 MKRN3Q13064 507 aaKnown RBP18.87■□□□□ 0.61
SEC61A1-207ENST00000498837 CWF19L2Q2TBE0 894 aaKnown RBP18.87■□□□□ 0.61
SEC61A1-207ENST00000498837 HDAC9Q9UKV0 1011 aa18.87■□□□□ 0.61
SEC61A1-207ENST00000498837 A0A1B0GUL6 1792 aa18.86■□□□□ 0.61
SEC61A1-207ENST00000498837 SASH1O94885 1247 aa18.86■□□□□ 0.61
SEC61A1-207ENST00000498837 TM4SF4P48230 202 aa18.86■□□□□ 0.61
SEC61A1-207ENST00000498837 OGFOD1Q8N543 542 aa18.86■□□□□ 0.61
SEC61A1-207ENST00000498837 PRKRIP1Q9H875 184 aaPredicted RBP18.86■□□□□ 0.61
SEC61A1-207ENST00000498837 STRIP1Q5VSL9 837 aa18.85■□□□□ 0.61
SEC61A1-207ENST00000498837 COA1Q9GZY4 146 aa18.85■□□□□ 0.61
SEC61A1-207ENST00000498837 MYO3BQ8WXR4 1341 aa18.84■□□□□ 0.61
SEC61A1-207ENST00000498837 KLRK1P26718 216 aa18.84■□□□□ 0.61
SEC61A1-207ENST00000498837 PTPN12Q05209 780 aaKnown RBP18.84■□□□□ 0.61
SEC61A1-207ENST00000498837 PRKG1Q13976 671 aa18.84■□□□□ 0.61
SEC61A1-207ENST00000498837 NEURL1BA8MQ27 555 aa18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 H7C1W4 665 aa18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 GPR25O00155 361 aa18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 NF2P35240 595 aa18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 NEXNQ0ZGT2 675 aa18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 PKN2Q16513 984 aaKnown RBP18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 TTLL5Q6EMB2 1281 aa18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 G2E3Q7L622 706 aa18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 UBE3BQ7Z3V4 1068 aa18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 TSR2Q969E8 191 aaKnown RBP18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 CHMP4AQ9BY43 222 aa18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 R3HDMLQ9H3Y0 253 aa18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 PCDH10Q9P2E7 1040 aa18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 LEMD3Q9Y2U8 911 aa18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 LAMB1P07942 1786 aa18.83■□□□□ 0.6
SEC61A1-207ENST00000498837 KIAA0825Q8IV33 1275 aa18.82■□□□□ 0.6
SEC61A1-207ENST00000498837 FZD1Q9UP38 647 aa18.82■□□□□ 0.6
SEC61A1-207ENST00000498837 ZNF804BA4D1E1 1349 aa18.81■□□□□ 0.6
SEC61A1-207ENST00000498837 IGHMBP2P38935 993 aaKnown RBP18.81■□□□□ 0.6
SEC61A1-207ENST00000498837 GTF2IP78347 998 aa18.81■□□□□ 0.6
SEC61A1-207ENST00000498837 ARMC9Q7Z3E5 817 aa18.81■□□□□ 0.6
SEC61A1-207ENST00000498837 STK31Q9BXU1 1019 aa18.81■□□□□ 0.6
SEC61A1-207ENST00000498837 ITGA6P23229 1130 aa18.8■□□□□ 0.6
SEC61A1-207ENST00000498837 NOM1Q5C9Z4 860 aaKnown RBP18.8■□□□□ 0.6
SEC61A1-207ENST00000498837 ZBED3Q96IU2 234 aaPredicted RBP18.8■□□□□ 0.6
SEC61A1-207ENST00000498837 MMP14P50281 582 aa18.79■□□□□ 0.6
SEC61A1-207ENST00000498837 SREBF2Q12772 1141 aa18.79■□□□□ 0.6
SEC61A1-207ENST00000498837 LDLRAD1Q5T700 205 aa18.79■□□□□ 0.6
SEC61A1-207ENST00000498837 PRPF38BQ5VTL8 546 aaKnown RBP18.79■□□□□ 0.6
SEC61A1-207ENST00000498837 APOBEC3FQ8IUX4 373 aaKnown RBP18.79■□□□□ 0.6
SEC61A1-207ENST00000498837 ANKRD2Q9GZV1 360 aa18.79■□□□□ 0.6
SEC61A1-207ENST00000498837 ANGEL1Q9UNK9 670 aaKnown RBP18.79■□□□□ 0.6
SEC61A1-207ENST00000498837 KIAA0100Q14667 2235 aaKnown RBP18.78■□□□□ 0.6
SEC61A1-207ENST00000498837 SNAP23O00161 211 aa18.78■□□□□ 0.6
SEC61A1-207ENST00000498837 FKTNO75072 461 aa18.78■□□□□ 0.6
SEC61A1-207ENST00000498837 SLC4A2P04920 1241 aa18.78■□□□□ 0.6
SEC61A1-207ENST00000498837 CASP7P55210 303 aa18.78■□□□□ 0.6
SEC61A1-207ENST00000498837 GCKRQ14397 625 aa18.78■□□□□ 0.6
SEC61A1-207ENST00000498837 SPRYD7Q5W111 196 aa18.78■□□□□ 0.6
SEC61A1-207ENST00000498837 FBXO46Q6PJ61 603 aaPredicted RBP18.78■□□□□ 0.6
SEC61A1-207ENST00000498837 MPHOSPH8Q99549 860 aa18.78■□□□□ 0.6
SEC61A1-207ENST00000498837 PLA2G12BQ9BX93 195 aa18.78■□□□□ 0.6
SEC61A1-207ENST00000498837 CFHR5Q9BXR6 569 aa18.78■□□□□ 0.6
SEC61A1-207ENST00000498837 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.78■□□□□ 0.6
SEC61A1-207ENST00000498837 CSF1RP07333 972 aa18.77■□□□□ 0.6
SEC61A1-207ENST00000498837 CHRNDQ07001 517 aa18.77■□□□□ 0.6
SEC61A1-207ENST00000498837 TWISTNBQ3B726 338 aaPredicted RBP18.77■□□□□ 0.6
SEC61A1-207ENST00000498837 CD209Q9NNX6 404 aa18.77■□□□□ 0.6
SEC61A1-207ENST00000498837 PCDHAC2Q9Y5I4 1007 aa18.77■□□□□ 0.6
SEC61A1-207ENST00000498837 KCNJ4P48050 445 aa18.76■□□□□ 0.59
SEC61A1-207ENST00000498837 CERS5Q8N5B7 392 aa18.76■□□□□ 0.59
SEC61A1-207ENST00000498837 DEFB129Q9H1M3 183 aa18.76■□□□□ 0.59
SEC61A1-207ENST00000498837 DLGAP5Q15398 846 aa18.75■□□□□ 0.59
SEC61A1-207ENST00000498837 HELBQ8NG08 1087 aaPredicted RBP18.75■□□□□ 0.59
SEC61A1-207ENST00000498837 SLC10A4Q96EP9 437 aa18.75■□□□□ 0.59
SEC61A1-207ENST00000498837 SSC5DA1L4H1 1573 aa18.75■□□□□ 0.59
SEC61A1-207ENST00000498837 HTTP42858 3142 aa18.75■□□□□ 0.59
SEC61A1-207ENST00000498837 OTOFQ9HC10 1997 aa18.75■□□□□ 0.59
SEC61A1-207ENST00000498837 IRS2Q9Y4H2 1338 aa18.74■□□□□ 0.59
SEC61A1-207ENST00000498837 COL1A1P02452 1464 aaPredicted RBP18.74■□□□□ 0.59
SEC61A1-207ENST00000498837 TAF5LO75529 589 aa18.74■□□□□ 0.59
SEC61A1-207ENST00000498837 FLIIQ13045 1269 aa18.74■□□□□ 0.59
SEC61A1-207ENST00000498837 CLMNQ96JQ2 1002 aa18.74■□□□□ 0.59
SEC61A1-207ENST00000498837 CENPFP49454 3210 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms