RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 ATP2B3Q16720 1220 aa12.43□□□□□ -0.42
SAMM50-206ENST00000494795 TMEM132AQ24JP5 1023 aa12.43□□□□□ -0.42
SAMM50-206ENST00000494795 BLOC1S2Q6QNY1 142 aa12.43□□□□□ -0.42
SAMM50-206ENST00000494795 NIP7Q9Y221 180 aaKnown RBP eCLIP12.43□□□□□ -0.42
SAMM50-206ENST00000494795 TAF1P21675 1872 aa12.43□□□□□ -0.42
SAMM50-206ENST00000494795 TOM1O60784 492 aa12.43□□□□□ -0.42
SAMM50-206ENST00000494795 ZMYM1Q5SVZ6 1142 aa12.43□□□□□ -0.42
SAMM50-206ENST00000494795 PODXL2Q9NZ53 605 aa12.43□□□□□ -0.42
SAMM50-206ENST00000494795 IQSEC3Q9UPP2 1182 aaPredicted RBP12.43□□□□□ -0.42
SAMM50-206ENST00000494795 FOSBP53539 338 aa12.42□□□□□ -0.42
SAMM50-206ENST00000494795 KLHL40Q2TBA0 621 aa12.42□□□□□ -0.42
SAMM50-206ENST00000494795 RAB11FIP4Q86YS3 637 aa12.42□□□□□ -0.42
SAMM50-206ENST00000494795 GPR108Q9NPR9 543 aa12.42□□□□□ -0.42
SAMM50-206ENST00000494795 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
SAMM50-206ENST00000494795 ANKRD18BA2A2Z9 1011 aa12.42□□□□□ -0.42
SAMM50-206ENST00000494795 PIH1D3Q9NQM4 214 aaKnown RBP12.42□□□□□ -0.42
SAMM50-206ENST00000494795 SRP68Q9UHB9 627 aaKnown RBP12.42□□□□□ -0.42
SAMM50-206ENST00000494795 SMC3Q9UQE7 1217 aa12.42□□□□□ -0.42
SAMM50-206ENST00000494795 WASHC4Q2M389 1173 aa12.41□□□□□ -0.42
SAMM50-206ENST00000494795 Q6ZUG5 572 aa12.41□□□□□ -0.42
SAMM50-206ENST00000494795 USP48Q86UV5 1035 aa12.41□□□□□ -0.42
SAMM50-206ENST00000494795 TM6SF1Q9BZW5 370 aa12.41□□□□□ -0.42
SAMM50-206ENST00000494795 GRPEL1Q9HAV7 217 aa12.41□□□□□ -0.42
SAMM50-206ENST00000494795 INCENPQ9NQS7 918 aa12.41□□□□□ -0.42
SAMM50-206ENST00000494795 CDHR2Q9BYE9 1310 aa12.41□□□□□ -0.42
SAMM50-206ENST00000494795 RNF113AO15541 343 aaKnown RBP12.41□□□□□ -0.42
SAMM50-206ENST00000494795 STX6O43752 255 aa12.41□□□□□ -0.42
SAMM50-206ENST00000494795 PDE8AO60658 829 aa12.41□□□□□ -0.42
SAMM50-206ENST00000494795 ZSCAN23Q3MJ62 389 aa12.41□□□□□ -0.42
SAMM50-206ENST00000494795 DDX11Q96FC9 970 aa12.41□□□□□ -0.42
SAMM50-206ENST00000494795 CDC37L1Q7L3B6 337 aa12.41□□□□□ -0.42
SAMM50-206ENST00000494795 NEK1Q96PY6 1258 aa12.41□□□□□ -0.42
SAMM50-206ENST00000494795 THRAP3Q9Y2W1 955 aaKnown RBP12.41□□□□□ -0.42
SAMM50-206ENST00000494795 VPS37CA5D8V6 355 aaPredicted RBP12.4□□□□□ -0.42
SAMM50-206ENST00000494795 ERVV-1B6SEH8 477 aa12.4□□□□□ -0.42
SAMM50-206ENST00000494795 GOLGA6L22H0YM25 854 aa12.4□□□□□ -0.42
SAMM50-206ENST00000494795 CCDC158Q5M9N0 1113 aa12.4□□□□□ -0.42
SAMM50-206ENST00000494795 BRF1Q92994 677 aa12.4□□□□□ -0.42
SAMM50-206ENST00000494795 SH3TC1Q8TE82 1336 aa12.4□□□□□ -0.42
SAMM50-206ENST00000494795 PDE8BO95263 885 aa12.4□□□□□ -0.42
SAMM50-206ENST00000494795 DNM1Q05193 864 aaKnown RBP12.4□□□□□ -0.42
SAMM50-206ENST00000494795 CCDC102BQ68D86 513 aa12.4□□□□□ -0.42
SAMM50-206ENST00000494795 BARGINQ6ZT62 677 aa12.4□□□□□ -0.42
SAMM50-206ENST00000494795 NCOA5Q9HCD5 579 aaKnown RBP12.4□□□□□ -0.42
SAMM50-206ENST00000494795 WWC3Q9ULE0 1092 aa12.4□□□□□ -0.42
SAMM50-206ENST00000494795 MTMR6Q9Y217 621 aa12.4□□□□□ -0.42
SAMM50-206ENST00000494795 NTSR2O95665 410 aa12.39□□□□□ -0.43
SAMM50-206ENST00000494795 APOBRQ0VD83 1088 aa12.39□□□□□ -0.43
SAMM50-206ENST00000494795 SYCE3A1L190 88 aa12.39□□□□□ -0.43
SAMM50-206ENST00000494795 FIBPO43427 364 aa12.39□□□□□ -0.43
SAMM50-206ENST00000494795 ZSCAN22P10073 491 aaPredicted RBP12.39□□□□□ -0.43
SAMM50-206ENST00000494795 ERFEQ4G0M1 354 aa12.39□□□□□ -0.43
SAMM50-206ENST00000494795 UBE2Q2Q8WVN8 375 aa12.39□□□□□ -0.43
SAMM50-206ENST00000494795 SMIM22K7EJ46 135 aa12.39□□□□□ -0.43
SAMM50-206ENST00000494795 IDH1O75874 414 aaKnown RBP12.39□□□□□ -0.43
SAMM50-206ENST00000494795 BCAMP50895 628 aa12.39□□□□□ -0.43
SAMM50-206ENST00000494795 CCT2P78371 535 aaKnown RBP12.39□□□□□ -0.43
SAMM50-206ENST00000494795 ANKRD36CQ5JPF3 1778 aa12.38□□□□□ -0.43
SAMM50-206ENST00000494795 AKAP11Q9UKA4 1901 aa12.38□□□□□ -0.43
SAMM50-206ENST00000494795 E7EWF7 191 aa12.38□□□□□ -0.43
SAMM50-206ENST00000494795 RNF20Q5VTR2 975 aa12.38□□□□□ -0.43
SAMM50-206ENST00000494795 UTP14AQ9BVJ6 771 aaKnown RBP12.38□□□□□ -0.43
SAMM50-206ENST00000494795 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
SAMM50-206ENST00000494795 FGAP02671 866 aa12.38□□□□□ -0.43
SAMM50-206ENST00000494795 TBC1D9BQ66K14 1250 aa12.38□□□□□ -0.43
SAMM50-206ENST00000494795 STK11IPQ8N1F8 1099 aa12.38□□□□□ -0.43
SAMM50-206ENST00000494795 F13A1P00488 732 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 SCRN1Q12765 414 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 TSGA10IPQ3SY00 556 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 CDCA7Q9BWT1 371 aaPredicted RBP12.37□□□□□ -0.43
SAMM50-206ENST00000494795 NAP1L2Q9ULW6 460 aaPredicted RBP12.37□□□□□ -0.43
SAMM50-206ENST00000494795 AKAP2Q9Y2D5 859 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 MYH3P11055 1940 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 PSMA5P28066 241 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 SKOR2Q2VWA4 1001 aaPredicted RBP12.37□□□□□ -0.43
SAMM50-206ENST00000494795 SLC9C2Q5TAH2 1124 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 NBPF3Q9H094 633 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 RBSNQ9H1K0 784 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 HELLSQ9NRZ9 838 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 USP21Q9UK80 565 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 NWD2Q9ULI1 1742 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 LAMA4Q16363 1823 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 WDR33Q9C0J8 1336 aaKnown RBP12.37□□□□□ -0.43
SAMM50-206ENST00000494795 RASGRF1Q13972 1273 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 HMG20BQ9P0W2 317 aa12.37□□□□□ -0.43
SAMM50-206ENST00000494795 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.37□□□□□ -0.43
SAMM50-206ENST00000494795 U3KPZ7 1027 aaPredicted RBP12.37□□□□□ -0.43
SAMM50-206ENST00000494795 SPEF2Q9C093 1822 aa12.36□□□□□ -0.43
SAMM50-206ENST00000494795 GPAA1O43292 621 aa12.36□□□□□ -0.43
SAMM50-206ENST00000494795 HSP90B1P14625 803 aaKnown RBP12.36□□□□□ -0.43
SAMM50-206ENST00000494795 FGFR2P21802 821 aa12.36□□□□□ -0.43
SAMM50-206ENST00000494795 KLRK1P26718 216 aa12.36□□□□□ -0.43
SAMM50-206ENST00000494795 CTDNEP1O95476 244 aa12.36□□□□□ -0.43
SAMM50-206ENST00000494795 LARP1BQ659C4 914 aaKnown RBP12.36□□□□□ -0.43
SAMM50-206ENST00000494795 TACC3Q9Y6A5 838 aa12.36□□□□□ -0.43
SAMM50-206ENST00000494795 PHF14O94880 888 aa12.35□□□□□ -0.43
SAMM50-206ENST00000494795 SENP2Q9HC62 589 aa12.35□□□□□ -0.43
SAMM50-206ENST00000494795 GJB4Q9NTQ9 266 aa12.35□□□□□ -0.43
SAMM50-206ENST00000494795 TFIP11Q9UBB9 837 aaKnown RBP12.35□□□□□ -0.43
SAMM50-206ENST00000494795 KDM4AO75164 1064 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms