RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 UBL7Q96S82 380 aaPredicted RBP8.3□□□□□ -1.08
SMC4-224ENST00000494612 MKNK1Q9BUB5 465 aa8.3□□□□□ -1.08
SMC4-224ENST00000494612 STIM2Q9P246 746 aa8.3□□□□□ -1.08
SMC4-224ENST00000494612 KIF4AO95239 1232 aa8.29□□□□□ -1.08
SMC4-224ENST00000494612 TMEM164Q5U3C3 297 aa8.29□□□□□ -1.08
SMC4-224ENST00000494612 CEP41Q9BYV8 373 aa8.29□□□□□ -1.08
SMC4-224ENST00000494612 SLAIN2Q9P270 581 aa8.29□□□□□ -1.08
SMC4-224ENST00000494612 FNDC3AQ9Y2H6 1198 aaKnown RBP8.29□□□□□ -1.08
SMC4-224ENST00000494612 LINC01387J3KSC0 135 aa8.28□□□□□ -1.08
SMC4-224ENST00000494612 ADAMTS4O75173 837 aa8.28□□□□□ -1.08
SMC4-224ENST00000494612 CEP135Q66GS9 1140 aa8.28□□□□□ -1.08
SMC4-224ENST00000494612 DTX1Q86Y01 620 aa8.28□□□□□ -1.08
SMC4-224ENST00000494612 GPR152Q8TDT2 470 aa8.28□□□□□ -1.08
SMC4-224ENST00000494612 CLP1Q92989 425 aaKnown RBP8.28□□□□□ -1.08
SMC4-224ENST00000494612 KCNK4Q9NYG8 393 aa8.28□□□□□ -1.08
SMC4-224ENST00000494612 WISP1O95388 367 aa8.27□□□□□ -1.09
SMC4-224ENST00000494612 CD68P34810 354 aaPredicted RBP8.27□□□□□ -1.09
SMC4-224ENST00000494612 TTC39BQ5VTQ0 682 aaPredicted RBP8.27□□□□□ -1.09
SMC4-224ENST00000494612 CEP120Q8N960 986 aa8.27□□□□□ -1.09
SMC4-224ENST00000494612 RASSF4Q9H2L5 321 aa8.27□□□□□ -1.09
SMC4-224ENST00000494612 SMNDC1O75940 238 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMC4-224ENST00000494612 CYP2E1P05181 493 aaPredicted RBP8.26□□□□□ -1.09
SMC4-224ENST00000494612 CDC27P30260 824 aa8.26□□□□□ -1.09
SMC4-224ENST00000494612 UVSSAQ2YD98 709 aa8.26□□□□□ -1.09
SMC4-224ENST00000494612 UTP4Q969X6 686 aaKnown RBP8.26□□□□□ -1.09
SMC4-224ENST00000494612 PBXIP1Q96AQ6 731 aa8.26□□□□□ -1.09
SMC4-224ENST00000494612 SPACA7Q96KW9 195 aa8.26□□□□□ -1.09
SMC4-224ENST00000494612 DBNDD2Q9BQY9 259 aa8.26□□□□□ -1.09
SMC4-224ENST00000494612 LACRTQ9GZZ8 138 aa8.26□□□□□ -1.09
SMC4-224ENST00000494612 ABI2Q9NYB9 513 aaPredicted RBP8.26□□□□□ -1.09
SMC4-224ENST00000494612 CARNS1A5YM72 827 aa8.25□□□□□ -1.09
SMC4-224ENST00000494612 SCNN1AP37088 669 aa8.25□□□□□ -1.09
SMC4-224ENST00000494612 RNF43Q68DV7 783 aa8.25□□□□□ -1.09
SMC4-224ENST00000494612 TXNDC11Q6PKC3 985 aa8.25□□□□□ -1.09
SMC4-224ENST00000494612 ARMC10Q8N2F6 343 aa8.25□□□□□ -1.09
SMC4-224ENST00000494612 PBX4Q9BYU1 374 aa8.25□□□□□ -1.09
SMC4-224ENST00000494612 C7orf69Q9H7B7 122 aa8.25□□□□□ -1.09
SMC4-224ENST00000494612 JAG1P78504 1218 aa8.24□□□□□ -1.09
SMC4-224ENST00000494612 KIAA1211Q6ZU35 1233 aa8.24□□□□□ -1.09
SMC4-224ENST00000494612 TRIM42Q8IWZ5 723 aa8.24□□□□□ -1.09
SMC4-224ENST00000494612 RETREG2Q8NC44 543 aa8.24□□□□□ -1.09
SMC4-224ENST00000494612 POP1Q99575 1024 aaKnown RBP8.24□□□□□ -1.09
SMC4-224ENST00000494612 ADAM19Q9H013 955 aa8.24□□□□□ -1.09
SMC4-224ENST00000494612 ADGRE2Q9UHX3 823 aa8.24□□□□□ -1.09
SMC4-224ENST00000494612 FSCN2O14926 492 aa8.23□□□□□ -1.09
SMC4-224ENST00000494612 PPP1R15AO75807 674 aaPredicted RBP8.23□□□□□ -1.09
SMC4-224ENST00000494612 EPHA1P21709 976 aa8.23□□□□□ -1.09
SMC4-224ENST00000494612 PDE12Q6L8Q7 609 aaKnown RBP8.23□□□□□ -1.09
SMC4-224ENST00000494612 ACAD11Q709F0 780 aa8.23□□□□□ -1.09
SMC4-224ENST00000494612 ABTB2Q8N961 1025 aa8.23□□□□□ -1.09
SMC4-224ENST00000494612 KLHL23Q8NBE8 558 aa8.23□□□□□ -1.09
SMC4-224ENST00000494612 KRTAP4-9Q9BYQ8 210 aa8.23□□□□□ -1.09
SMC4-224ENST00000494612 ELP3Q9H9T3 547 aa8.23□□□□□ -1.09
SMC4-224ENST00000494612 SH2B1Q9NRF2 756 aaPredicted RBP8.23□□□□□ -1.09
SMC4-224ENST00000494612 TMEM63CQ9P1W3 806 aa8.23□□□□□ -1.09
SMC4-224ENST00000494612 SEPT3Q9UH03 358 aa8.23□□□□□ -1.09
SMC4-224ENST00000494612 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.23□□□□□ -1.09
SMC4-224ENST00000494612 HMX2A2RU54 273 aa8.22□□□□□ -1.09
SMC4-224ENST00000494612 PRR19A6NJB7 356 aa8.22□□□□□ -1.09
SMC4-224ENST00000494612 PDIA4P13667 645 aaKnown RBP8.22□□□□□ -1.09
SMC4-224ENST00000494612 XKR5Q6UX68 686 aa8.22□□□□□ -1.09
SMC4-224ENST00000494612 FAM46AQ96IP4 442 aaKnown RBP8.22□□□□□ -1.09
SMC4-224ENST00000494612 CARD10Q9BWT7 1032 aa8.22□□□□□ -1.09
SMC4-224ENST00000494612 CNTN3Q9P232 1028 aa8.22□□□□□ -1.09
SMC4-224ENST00000494612 ADAM11O75078 769 aa8.21□□□□□ -1.1
SMC4-224ENST00000494612 CDC25BP30305 580 aa8.21□□□□□ -1.1
SMC4-224ENST00000494612 NCAPG2Q86XI2 1143 aa8.21□□□□□ -1.1
SMC4-224ENST00000494612 FOXD4L4Q8WXT5 416 aaPredicted RBP8.21□□□□□ -1.1
SMC4-224ENST00000494612 NUDT16Q96DE0 195 aaKnown RBP8.21□□□□□ -1.1
SMC4-224ENST00000494612 KLHDC7BQ96G42 594 aa8.21□□□□□ -1.1
SMC4-224ENST00000494612 SALL4Q9UJQ4 1053 aa8.21□□□□□ -1.1
SMC4-224ENST00000494612 NFKBIEO00221 500 aa8.2□□□□□ -1.1
SMC4-224ENST00000494612 DDX3YO15523 660 aaKnown RBP8.2□□□□□ -1.1
SMC4-224ENST00000494612 ATCAYQ86WG3 371 aa8.2□□□□□ -1.1
SMC4-224ENST00000494612 PTPRAP18433 802 aa8.19□□□□□ -1.1
SMC4-224ENST00000494612 DUOXA2Q1HG44 320 aa8.19□□□□□ -1.1
SMC4-224ENST00000494612 OGFOD2Q6N063 350 aa8.19□□□□□ -1.1
SMC4-224ENST00000494612 CLEC10AQ8IUN9 316 aa8.19□□□□□ -1.1
SMC4-224ENST00000494612 SHKBP1Q8TBC3 707 aa8.19□□□□□ -1.1
SMC4-224ENST00000494612 MYRFLQ96LU7 910 aa8.19□□□□□ -1.1
SMC4-224ENST00000494612 ATP2B4P23634 1241 aa8.18□□□□□ -1.1
SMC4-224ENST00000494612 FAM117BQ6P1L5 589 aa8.18□□□□□ -1.1
SMC4-224ENST00000494612 ZNF438Q7Z4V0 828 aa8.18□□□□□ -1.1
SMC4-224ENST00000494612 WNT8BQ93098 351 aa8.18□□□□□ -1.1
SMC4-224ENST00000494612 GGNBP2Q9H3C7 697 aa8.18□□□□□ -1.1
SMC4-224ENST00000494612 KCNF1Q9H3M0 494 aa8.18□□□□□ -1.1
SMC4-224ENST00000494612 SEC31BQ9NQW1 1179 aa8.18□□□□□ -1.1
SMC4-224ENST00000494612 ANGEL1Q9UNK9 670 aaKnown RBP8.18□□□□□ -1.1
SMC4-224ENST00000494612 SART1O43290 800 aaKnown RBP8.17□□□□□ -1.1
SMC4-224ENST00000494612 RPLP1P05386 114 aaKnown RBP8.17□□□□□ -1.1
SMC4-224ENST00000494612 C1orf127Q8N9H9 656 aa8.17□□□□□ -1.1
SMC4-224ENST00000494612 UBASH3BQ8TF42 649 aa8.17□□□□□ -1.1
SMC4-224ENST00000494612 FAM83CQ9BQN1 747 aa8.17□□□□□ -1.1
SMC4-224ENST00000494612 DZANK1Q9NVP4 752 aa8.17□□□□□ -1.1
SMC4-224ENST00000494612 KANSL3Q9P2N6 904 aa8.17□□□□□ -1.1
SMC4-224ENST00000494612 H3BRJ5 948 aa8.16□□□□□ -1.1
SMC4-224ENST00000494612 ACPPP15309 386 aa8.16□□□□□ -1.1
SMC4-224ENST00000494612 PIP4K2BP78356 416 aa8.16□□□□□ -1.1
SMC4-224ENST00000494612 ABI1Q8IZP0 508 aa8.16□□□□□ -1.1
SMC4-224ENST00000494612 ASIC4Q96FT7 647 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms