RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 RBBP6Q7Z6E9 1792 aaKnown RBP18.09■□□□□ 0.49
ATG4B-222ENST00000491867 IGF2BP3O00425 579 aaKnown RBP eCLIP18.09■□□□□ 0.49
ATG4B-222ENST00000491867 SASH1O94885 1247 aa18.09■□□□□ 0.49
ATG4B-222ENST00000491867 INHBEP58166 350 aa18.09■□□□□ 0.49
ATG4B-222ENST00000491867 SLC10A4Q96EP9 437 aa18.09■□□□□ 0.49
ATG4B-222ENST00000491867 XDHP47989 1333 aa18.08■□□□□ 0.49
ATG4B-222ENST00000491867 TMEM106CQ9BVX2 250 aa18.08■□□□□ 0.48
ATG4B-222ENST00000491867 EFCC1Q9HA90 598 aa18.08■□□□□ 0.48
ATG4B-222ENST00000491867 FZD1Q9UP38 647 aa18.08■□□□□ 0.48
ATG4B-222ENST00000491867 COL6A3P12111 3177 aa18.08■□□□□ 0.48
ATG4B-222ENST00000491867 WTIPA6NIX2 430 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-222ENST00000491867 RIPK4P57078 832 aa18.07■□□□□ 0.48
ATG4B-222ENST00000491867 TRIM28Q13263 835 aaKnown RBP18.07■□□□□ 0.48
ATG4B-222ENST00000491867 DACT2Q5SW24 774 aa18.07■□□□□ 0.48
ATG4B-222ENST00000491867 FBXW7Q969H0 707 aa18.07■□□□□ 0.48
ATG4B-222ENST00000491867 PNNQ9H307 717 aaKnown RBP18.07■□□□□ 0.48
ATG4B-222ENST00000491867 H0YGN5 161 aa18.06■□□□□ 0.48
ATG4B-222ENST00000491867 ATP2B4P23634 1241 aa18.06■□□□□ 0.48
ATG4B-222ENST00000491867 CCDC152Q4G0S7 254 aa18.06■□□□□ 0.48
ATG4B-222ENST00000491867 APOBEC3FQ8IUX4 373 aaKnown RBP18.06■□□□□ 0.48
ATG4B-222ENST00000491867 ZBTB38Q8NAP3 1195 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-222ENST00000491867 CLMNQ96JQ2 1002 aa18.06■□□□□ 0.48
ATG4B-222ENST00000491867 CCDC85AQ96PX6 553 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-222ENST00000491867 DLL1O00548 723 aa18.05■□□□□ 0.48
ATG4B-222ENST00000491867 CAP1Q01518 475 aa18.05■□□□□ 0.48
ATG4B-222ENST00000491867 CRHR2Q13324 411 aa18.05■□□□□ 0.48
ATG4B-222ENST00000491867 HDGFL1Q5TGJ6 251 aa18.05■□□□□ 0.48
ATG4B-222ENST00000491867 OTUD5Q96G74 571 aa18.05■□□□□ 0.48
ATG4B-222ENST00000491867 WNK4Q96J92 1243 aa18.05■□□□□ 0.48
ATG4B-222ENST00000491867 ZBTB48P10074 688 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-222ENST00000491867 HSP90B1P14625 803 aaKnown RBP18.04■□□□□ 0.48
ATG4B-222ENST00000491867 ANKRD18AQ8IVF6 992 aa18.04■□□□□ 0.48
ATG4B-222ENST00000491867 ZNF333Q96JL9 665 aa18.04■□□□□ 0.48
ATG4B-222ENST00000491867 MYO3BQ8WXR4 1341 aa18.03■□□□□ 0.48
ATG4B-222ENST00000491867 SP3Q02447 781 aa18.03■□□□□ 0.48
ATG4B-222ENST00000491867 STRIP1Q5VSL9 837 aa18.03■□□□□ 0.48
ATG4B-222ENST00000491867 DBF4Q9UBU7 674 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-222ENST00000491867 OTUD7BQ6GQQ9 843 aa18.02■□□□□ 0.48
ATG4B-222ENST00000491867 JARID2Q92833 1246 aaPredicted RBP18.02■□□□□ 0.48
ATG4B-222ENST00000491867 DEFB129Q9H1M3 183 aa18.02■□□□□ 0.48
ATG4B-222ENST00000491867 CHL1O00533 1208 aa18.01■□□□□ 0.47
ATG4B-222ENST00000491867 PDE8AO60658 829 aa18.01■□□□□ 0.47
ATG4B-222ENST00000491867 MAP3K11Q16584 847 aa18.01■□□□□ 0.47
ATG4B-222ENST00000491867 SLC4A8Q2Y0W8 1093 aa18.01■□□□□ 0.47
ATG4B-222ENST00000491867 SLC9C1Q4G0N8 1177 aa18.01■□□□□ 0.47
ATG4B-222ENST00000491867 CHRDL2Q6WN34 429 aa18.01■□□□□ 0.47
ATG4B-222ENST00000491867 KIAA0825Q8IV33 1275 aa18.01■□□□□ 0.47
ATG4B-222ENST00000491867 SLC17A8Q8NDX2 589 aa18.01■□□□□ 0.47
ATG4B-222ENST00000491867 HYPKQ9NX55 129 aa18.01■□□□□ 0.47
ATG4B-222ENST00000491867 MED23Q9ULK4 1368 aa18.01■□□□□ 0.47
ATG4B-222ENST00000491867 PPP1R12BO60237 982 aaPredicted RBP18■□□□□ 0.47
ATG4B-222ENST00000491867 MYCP01106 439 aaPredicted RBP18■□□□□ 0.47
ATG4B-222ENST00000491867 MMP14P50281 582 aa18■□□□□ 0.47
ATG4B-222ENST00000491867 LMOD3Q0VAK6 560 aa18■□□□□ 0.47
ATG4B-222ENST00000491867 RIC3Q7Z5B4 369 aa18■□□□□ 0.47
ATG4B-222ENST00000491867 NBPF11Q86T75 865 aa18■□□□□ 0.47
ATG4B-222ENST00000491867 ZBED3Q96IU2 234 aaPredicted RBP18■□□□□ 0.47
ATG4B-222ENST00000491867 PTPN18Q99952 460 aa18■□□□□ 0.47
ATG4B-222ENST00000491867 LAS1LQ9Y4W2 734 aaKnown RBP18■□□□□ 0.47
ATG4B-222ENST00000491867 GJA5P36382 358 aa17.99■□□□□ 0.47
ATG4B-222ENST00000491867 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
ATG4B-222ENST00000491867 COA1Q9GZY4 146 aa17.99■□□□□ 0.47
ATG4B-222ENST00000491867 PTCH2Q9Y6C5 1203 aa17.99■□□□□ 0.47
ATG4B-222ENST00000491867 LAMA3Q16787 3333 aa17.99■□□□□ 0.47
ATG4B-222ENST00000491867 PCCAP05165 728 aaPredicted RBP17.98■□□□□ 0.47
ATG4B-222ENST00000491867 HOXB7P09629 217 aa17.98■□□□□ 0.47
ATG4B-222ENST00000491867 TTLL5Q6EMB2 1281 aa17.98■□□□□ 0.47
ATG4B-222ENST00000491867 MINPP1Q9UNW1 487 aa17.98■□□□□ 0.47
ATG4B-222ENST00000491867 SSC5DA1L4H1 1573 aa17.98■□□□□ 0.47
ATG4B-222ENST00000491867 COL1A1P02452 1464 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-222ENST00000491867 CCT4P50991 539 aaKnown RBP17.97■□□□□ 0.47
ATG4B-222ENST00000491867 GOLGA2Q08379 1002 aa17.97■□□□□ 0.47
ATG4B-222ENST00000491867 TXNRD3Q86VQ6 643 aa17.97■□□□□ 0.47
ATG4B-222ENST00000491867 CCDC191Q8NCU4 936 aa17.97■□□□□ 0.47
ATG4B-222ENST00000491867 CDC5LQ99459 802 aaKnown RBP17.97■□□□□ 0.47
ATG4B-222ENST00000491867 MYD88Q99836 296 aa17.97■□□□□ 0.47
ATG4B-222ENST00000491867 RBM27Q9P2N5 1060 aaKnown RBP17.97■□□□□ 0.47
ATG4B-222ENST00000491867 ZNF646O15015 1829 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-222ENST00000491867 UNCXA6NJT0 531 aa17.96■□□□□ 0.47
ATG4B-222ENST00000491867 ARHGEF6Q15052 776 aa17.96■□□□□ 0.47
ATG4B-222ENST00000491867 DLGAP5Q15398 846 aa17.96■□□□□ 0.47
ATG4B-222ENST00000491867 BSDC1Q9NW68 430 aaPredicted RBP17.96■□□□□ 0.47
ATG4B-222ENST00000491867 LAMB1P07942 1786 aa17.96■□□□□ 0.47
ATG4B-222ENST00000491867 TESPA1A2RU30 521 aaPredicted RBP17.95■□□□□ 0.46
ATG4B-222ENST00000491867 GTF2IP78347 998 aa17.95■□□□□ 0.46
ATG4B-222ENST00000491867 NEUROD2Q15784 382 aa17.95■□□□□ 0.46
ATG4B-222ENST00000491867 SUPT20HL1Q3ZLR7 823 aa17.95■□□□□ 0.46
ATG4B-222ENST00000491867 CWC25Q9NXE8 425 aaPredicted RBP17.95■□□□□ 0.46
ATG4B-222ENST00000491867 IREB2P48200 963 aaKnown RBP17.94■□□□□ 0.46
ATG4B-222ENST00000491867 CTSWP56202 376 aa17.94■□□□□ 0.46
ATG4B-222ENST00000491867 NBPF12Q5TAG4 269 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-222ENST00000491867 DUSP27Q5VZP5 1158 aa17.94■□□□□ 0.46
ATG4B-222ENST00000491867 PPP2R3BQ9Y5P8 575 aa17.94■□□□□ 0.46
ATG4B-222ENST00000491867 USP2O75604 605 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-222ENST00000491867 KLRK1P26718 216 aa17.93■□□□□ 0.46
ATG4B-222ENST00000491867 SH3TC2Q8TF17 1288 aa17.93■□□□□ 0.46
ATG4B-222ENST00000491867 DPF3Q92784 378 aa17.93■□□□□ 0.46
ATG4B-222ENST00000491867 PHAXQ9H814 394 aaKnown RBP17.93■□□□□ 0.46
ATG4B-222ENST00000491867 PCDHAC2Q9Y5I4 1007 aa17.93■□□□□ 0.46
ATG4B-222ENST00000491867 CLRN2A0PK11 232 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms