RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CLCN6P51797 869 aa22.58■■□□□ 1.2
SNAPC3-206ENST00000490969 PIP4K2BP78356 416 aa22.58■■□□□ 1.2
SNAPC3-206ENST00000490969 CCDC93Q567U6 631 aa22.58■■□□□ 1.2
SNAPC3-206ENST00000490969 ZNF589Q86UQ0 364 aaPredicted RBP22.58■■□□□ 1.2
SNAPC3-206ENST00000490969 LRRN4CLQ8ND94 238 aa22.58■■□□□ 1.2
SNAPC3-206ENST00000490969 PPP1R13BQ96KQ4 1090 aa22.58■■□□□ 1.2
SNAPC3-206ENST00000490969 BTG4Q9NY30 223 aa22.58■■□□□ 1.2
SNAPC3-206ENST00000490969 IMPACTQ9P2X3 320 aa22.58■■□□□ 1.2
SNAPC3-206ENST00000490969 SCN11AQ9UI33 1791 aa22.58■■□□□ 1.2
SNAPC3-206ENST00000490969 JCADQ9P266 1359 aa22.57■■□□□ 1.2
SNAPC3-206ENST00000490969 VGLL3A8MV65 326 aa22.57■■□□□ 1.2
SNAPC3-206ENST00000490969 TULP2O00295 520 aa22.57■■□□□ 1.2
SNAPC3-206ENST00000490969 IFNL2Q8IZJ0 200 aa22.57■■□□□ 1.2
SNAPC3-206ENST00000490969 SYT10Q6XYQ8 523 aa22.57■■□□□ 1.2
SNAPC3-206ENST00000490969 EAF2Q96CJ1 260 aaPredicted RBP22.57■■□□□ 1.2
SNAPC3-206ENST00000490969 FTOQ9C0B1 505 aaKnown RBP eCLIP22.57■■□□□ 1.2
SNAPC3-206ENST00000490969 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.57■■□□□ 1.22e-7■■■■□ 23.1
SNAPC3-206ENST00000490969 EVA1CP58658 441 aa22.56■■□□□ 1.2
SNAPC3-206ENST00000490969 CCDC8Q9H0W5 538 aaPredicted RBP22.56■■□□□ 1.2
SNAPC3-206ENST00000490969 SLC52A2Q9HAB3 445 aa22.56■■□□□ 1.2
SNAPC3-206ENST00000490969 C9orf78Q9NZ63 289 aaPredicted RBP22.56■■□□□ 1.2
SNAPC3-206ENST00000490969 OVOS2A0A0G2JMS6 1433 aa22.56■■□□□ 1.2
SNAPC3-206ENST00000490969 PNMA6AP0CW24 399 aaPredicted RBP22.56■■□□□ 1.2
SNAPC3-206ENST00000490969 SLC20A2Q08357 652 aa22.56■■□□□ 1.2
SNAPC3-206ENST00000490969 PROSER3Q2NL68 480 aa22.56■■□□□ 1.2
SNAPC3-206ENST00000490969 ENGASEQ8NFI3 743 aa22.56■■□□□ 1.2
SNAPC3-206ENST00000490969 NAT10Q9H0A0 1025 aaKnown RBP22.56■■□□□ 1.2
SNAPC3-206ENST00000490969 BOLA2Q9H3K6 86 aa22.56■■□□□ 1.2
SNAPC3-206ENST00000490969 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.56■■□□□ 1.2
SNAPC3-206ENST00000490969 PKD1L3Q7Z443 1732 aa22.55■■□□□ 1.2
SNAPC3-206ENST00000490969 MYH15Q9Y2K3 1946 aa22.55■■□□□ 1.2
SNAPC3-206ENST00000490969 HSP90B1P14625 803 aaKnown RBP22.55■■□□□ 1.2
SNAPC3-206ENST00000490969 FAM160A1Q05DH4 1040 aa22.55■■□□□ 1.2
SNAPC3-206ENST00000490969 KRT32Q14532 448 aa22.55■■□□□ 1.2
SNAPC3-206ENST00000490969 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.55■■□□□ 1.2
SNAPC3-206ENST00000490969 PSDA5PKW4 1024 aaPredicted RBP22.55■■□□□ 1.2
SNAPC3-206ENST00000490969 SASH1O94885 1247 aa22.55■■□□□ 1.2
SNAPC3-206ENST00000490969 HOXB7P09629 217 aa22.55■■□□□ 1.2
SNAPC3-206ENST00000490969 TAF5LO75529 589 aa22.54■■□□□ 1.2
SNAPC3-206ENST00000490969 ARHGAP29Q52LW3 1261 aa22.54■■□□□ 1.2
SNAPC3-206ENST00000490969 CCDC150Q8NCX0 1101 aa22.54■■□□□ 1.2
SNAPC3-206ENST00000490969 TLR7Q9NYK1 1049 aaKnown RBP22.54■■□□□ 1.2
SNAPC3-206ENST00000490969 CAPN2P17655 700 aa22.54■■□□□ 1.2
SNAPC3-206ENST00000490969 PLA2G4AP47712 749 aa22.54■■□□□ 1.2
SNAPC3-206ENST00000490969 Q6ZUG5 572 aa22.54■■□□□ 1.2
SNAPC3-206ENST00000490969 SYTL4Q96C24 671 aaPredicted RBP22.54■■□□□ 1.2
SNAPC3-206ENST00000490969 NEK1Q96PY6 1258 aa22.54■■□□□ 1.2
SNAPC3-206ENST00000490969 DNAJC2Q99543 621 aaKnown RBP22.54■■□□□ 1.2
SNAPC3-206ENST00000490969 CARD10Q9BWT7 1032 aa22.54■■□□□ 1.2
SNAPC3-206ENST00000490969 HEG1Q9ULI3 1381 aa22.53■■□□□ 1.2
SNAPC3-206ENST00000490969 USPL1Q5W0Q7 1092 aa22.53■■□□□ 1.2
SNAPC3-206ENST00000490969 FBXW7Q969H0 707 aa22.53■■□□□ 1.2
SNAPC3-206ENST00000490969 ARMCX5Q6P1M9 558 aa22.53■■□□□ 1.2
SNAPC3-206ENST00000490969 ZNF790Q6PG37 636 aa22.53■■□□□ 1.2
SNAPC3-206ENST00000490969 SMARCC2Q8TAQ2 1214 aa22.53■■□□□ 1.2
SNAPC3-206ENST00000490969 ERCC4Q92889 916 aaPredicted RBP22.53■■□□□ 1.2
SNAPC3-206ENST00000490969 USP28Q96RU2 1077 aa22.53■■□□□ 1.2
SNAPC3-206ENST00000490969 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.53■■□□□ 1.2
SNAPC3-206ENST00000490969 AHDC1Q5TGY3 1603 aaPredicted RBP22.52■■□□□ 1.2
SNAPC3-206ENST00000490969 HNRNPH2P55795 449 aaKnown RBP22.52■■□□□ 1.2
SNAPC3-206ENST00000490969 SCRN1Q12765 414 aa22.52■■□□□ 1.2
SNAPC3-206ENST00000490969 NAA16Q6N069 864 aaPredicted RBP22.52■■□□□ 1.2
SNAPC3-206ENST00000490969 FSIP1Q8NA03 581 aa22.52■■□□□ 1.2
SNAPC3-206ENST00000490969 ZCRB1Q8TBF4 217 aaKnown RBP22.52■■□□□ 1.2
SNAPC3-206ENST00000490969 CHMP4AQ9BY43 222 aa22.52■■□□□ 1.2
SNAPC3-206ENST00000490969 ALDH1L1O75891 902 aa22.52■■□□□ 1.19
SNAPC3-206ENST00000490969 TUBB4AP04350 444 aa22.52■■□□□ 1.19
SNAPC3-206ENST00000490969 KCNJ6P48051 423 aa22.52■■□□□ 1.19
SNAPC3-206ENST00000490969 SFPQP23246 707 aaKnown RBP eCLIP22.51■■□□□ 1.19
SNAPC3-206ENST00000490969 G3BP1Q13283 466 aaKnown RBP eCLIP22.51■■□□□ 1.19
SNAPC3-206ENST00000490969 TMC6Q7Z403 805 aa22.51■■□□□ 1.19
SNAPC3-206ENST00000490969 DCAF5Q96JK2 942 aa22.51■■□□□ 1.19
SNAPC3-206ENST00000490969 NAP1L2Q9ULW6 460 aaPredicted RBP22.51■■□□□ 1.19
SNAPC3-206ENST00000490969 ZRANB2O95218 330 aaKnown RBP eCLIP22.51■■□□□ 1.19
SNAPC3-206ENST00000490969 ADAMTS2O95450 1211 aa22.51■■□□□ 1.19
SNAPC3-206ENST00000490969 IL2RBP14784 551 aa22.51■■□□□ 1.19
SNAPC3-206ENST00000490969 FOSBP53539 338 aa22.51■■□□□ 1.19
SNAPC3-206ENST00000490969 ZNF496Q96IT1 587 aaPredicted RBP22.51■■□□□ 1.19
SNAPC3-206ENST00000490969 XPO4Q9C0E2 1151 aaKnown RBP22.51■■□□□ 1.19
SNAPC3-206ENST00000490969 HDAC5Q9UQL6 1122 aa22.51■■□□□ 1.19
SNAPC3-206ENST00000490969 SMC2O95347 1197 aa22.5■■□□□ 1.19
SNAPC3-206ENST00000490969 LLPHQ9BRT6 129 aaKnown RBP22.5■■□□□ 1.19
SNAPC3-206ENST00000490969 MAP3K2Q9Y2U5 619 aa22.5■■□□□ 1.19
SNAPC3-206ENST00000490969 ME1P48163 572 aa22.5■■□□□ 1.19
SNAPC3-206ENST00000490969 ZNF396Q96N95 335 aaPredicted RBP22.5■■□□□ 1.19
SNAPC3-206ENST00000490969 ARGLU1Q9NWB6 273 aaPredicted RBP22.5■■□□□ 1.19
SNAPC3-206ENST00000490969 COL16A1Q07092 1604 aaPredicted RBP22.49■■□□□ 1.19
SNAPC3-206ENST00000490969 ATL3Q6DD88 541 aa22.49■■□□□ 1.19
SNAPC3-206ENST00000490969 TMCO3Q6UWJ1 677 aa22.49■■□□□ 1.19
SNAPC3-206ENST00000490969 NSUN7Q8NE18 718 aaKnown RBP22.49■■□□□ 1.19
SNAPC3-206ENST00000490969 IFNKQ9P0W0 207 aa22.49■■□□□ 1.19
SNAPC3-206ENST00000490969 ORC3Q9UBD5 711 aaPredicted RBP22.49■■□□□ 1.19
SNAPC3-206ENST00000490969 NRDCO43847 1150 aa22.48■■□□□ 1.19
SNAPC3-206ENST00000490969 PIP4K2AP48426 406 aaPredicted RBP22.48■■□□□ 1.19
SNAPC3-206ENST00000490969 CWF19L2Q2TBE0 894 aaKnown RBP22.48■■□□□ 1.19
SNAPC3-206ENST00000490969 UBXN4Q92575 508 aa22.48■■□□□ 1.19
SNAPC3-206ENST00000490969 COL15A1P39059 1388 aa22.48■■□□□ 1.19
SNAPC3-206ENST00000490969 SHANK3Q9BYB0 1731 aa22.48■■□□□ 1.19
SNAPC3-206ENST00000490969 PDE4CQ08493 712 aa22.48■■□□□ 1.19
SNAPC3-206ENST00000490969 GORABQ5T7V8 394 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms