RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 PNMA6EA0A0J9YXQ4 647 aa13.75□□□□□ -0.21
CPSF7-212ENST00000489728 KIF3CO14782 793 aa13.75□□□□□ -0.21
CPSF7-212ENST00000489728 ZBTB22O15209 634 aa13.75□□□□□ -0.21
CPSF7-212ENST00000489728 DOK7Q18PE1 504 aa13.75□□□□□ -0.21
CPSF7-212ENST00000489728 C20orf194Q5TEA3 1177 aa13.75□□□□□ -0.21
CPSF7-212ENST00000489728 CEP85Q6P2H3 762 aa13.75□□□□□ -0.21
CPSF7-212ENST00000489728 DPF2Q92785 391 aa13.75□□□□□ -0.21
CPSF7-212ENST00000489728 GPR101Q96P66 508 aaPredicted RBP13.75□□□□□ -0.21
CPSF7-212ENST00000489728 NMRK2Q9NPI5 230 aa13.75□□□□□ -0.21
CPSF7-212ENST00000489728 CEP126Q9P2H0 1117 aa13.75□□□□□ -0.21
CPSF7-212ENST00000489728 ARAP2Q8WZ64 1704 aa13.75□□□□□ -0.21
CPSF7-212ENST00000489728 SCN9AQ15858 1988 aa13.74□□□□□ -0.21
CPSF7-212ENST00000489728 MYO3BQ8WXR4 1341 aa13.74□□□□□ -0.21
CPSF7-212ENST00000489728 HMMRO75330 724 aa13.74□□□□□ -0.21
CPSF7-212ENST00000489728 VIL1P09327 827 aaKnown RBP13.74□□□□□ -0.21
CPSF7-212ENST00000489728 FGFR2P21802 821 aa13.74□□□□□ -0.21
CPSF7-212ENST00000489728 LMOD1P29536 600 aaPredicted RBP13.74□□□□□ -0.21
CPSF7-212ENST00000489728 MMP14P50281 582 aa13.74□□□□□ -0.21
CPSF7-212ENST00000489728 AAMPQ13685 434 aa13.74□□□□□ -0.21
CPSF7-212ENST00000489728 LPIN2Q92539 896 aa13.74□□□□□ -0.21
CPSF7-212ENST00000489728 SIL1Q9H173 461 aa13.74□□□□□ -0.21
CPSF7-212ENST00000489728 HACL1Q9UJ83 578 aa13.74□□□□□ -0.21
CPSF7-212ENST00000489728 NOP58Q9Y2X3 529 aaKnown RBP13.74□□□□□ -0.21
CPSF7-212ENST00000489728 ZNF646O15015 1829 aaPredicted RBP13.74□□□□□ -0.21
CPSF7-212ENST00000489728 USP17L3A6NCW0 530 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 USP17L4A6NCW7 530 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 WTIPA6NIX2 430 aaPredicted RBP13.73□□□□□ -0.21
CPSF7-212ENST00000489728 RAD17O75943 681 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 IFIT1P09914 478 aaKnown RBP13.73□□□□□ -0.21
CPSF7-212ENST00000489728 SLC5A1P13866 664 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 IL1R1P14778 569 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 SCNN1DP51172 638 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 CAVIN4Q5BKX8 364 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 STRIP1Q5VSL9 837 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 USP17L1Q7RTZ2 530 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 TXNRD3Q86VQ6 643 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 C16orf71Q8IYS4 520 aaPredicted RBP13.73□□□□□ -0.21
CPSF7-212ENST00000489728 C1orf115Q9H7X2 142 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 RRAGCQ9HB90 399 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 CD209Q9NNX6 404 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 PA2G4Q9UQ80 394 aaKnown RBP13.73□□□□□ -0.21
CPSF7-212ENST00000489728 AKAP2Q9Y2D5 859 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 GJA3Q9Y6H8 435 aa13.73□□□□□ -0.21
CPSF7-212ENST00000489728 POTECB2RU33 542 aa13.72□□□□□ -0.21
CPSF7-212ENST00000489728 PSMD14O00487 310 aa13.72□□□□□ -0.21
CPSF7-212ENST00000489728 TOMM70O94826 608 aa13.72□□□□□ -0.21
CPSF7-212ENST00000489728 KLRK1P26718 216 aa13.72□□□□□ -0.21
CPSF7-212ENST00000489728 G3BP1Q13283 466 aaKnown RBP eCLIP13.72□□□□□ -0.21
CPSF7-212ENST00000489728 ATP2B3Q16720 1220 aa13.72□□□□□ -0.21
CPSF7-212ENST00000489728 HSP90AB4PQ58FF6 505 aa13.72□□□□□ -0.21
CPSF7-212ENST00000489728 PNMA8AQ86V59 439 aaPredicted RBP13.72□□□□□ -0.21
CPSF7-212ENST00000489728 AGBL3Q8NEM8 1001 aa13.72□□□□□ -0.21
CPSF7-212ENST00000489728 RBM46Q8TBY0 533 aaKnown RBP13.72□□□□□ -0.21
CPSF7-212ENST00000489728 TAF1DQ9H5J8 278 aaPredicted RBP13.72□□□□□ -0.21
CPSF7-212ENST00000489728 GPRC5DQ9NZD1 345 aa13.72□□□□□ -0.21
CPSF7-212ENST00000489728 ADAMTSL1Q8N6G6 1762 aa13.71□□□□□ -0.21
CPSF7-212ENST00000489728 SNAP23O00161 211 aa13.71□□□□□ -0.21
CPSF7-212ENST00000489728 HIBADHP31937 336 aaKnown RBP13.71□□□□□ -0.21
CPSF7-212ENST00000489728 GMPSP49915 693 aaPredicted RBP13.71□□□□□ -0.21
CPSF7-212ENST00000489728 FKBP1AP62942 108 aaKnown RBP13.71□□□□□ -0.21
CPSF7-212ENST00000489728 RSBN1LQ6PCB5 846 aaPredicted RBP13.71□□□□□ -0.21
CPSF7-212ENST00000489728 FBXO33Q7Z6M2 555 aa13.71□□□□□ -0.21
CPSF7-212ENST00000489728 FAM84BQ96KN1 310 aaPredicted RBP13.71□□□□□ -0.21
CPSF7-212ENST00000489728 GPR108Q9NPR9 543 aa13.71□□□□□ -0.21
CPSF7-212ENST00000489728 FAM205AQ6ZU69 1335 aa13.7□□□□□ -0.22
CPSF7-212ENST00000489728 SASH1O94885 1247 aa13.7□□□□□ -0.22
CPSF7-212ENST00000489728 EPHX2P34913 555 aa13.7□□□□□ -0.22
CPSF7-212ENST00000489728 DACT2Q5SW24 774 aa13.7□□□□□ -0.22
CPSF7-212ENST00000489728 USP50Q70EL3 339 aaPredicted RBP13.7□□□□□ -0.22
CPSF7-212ENST00000489728 VPS37DQ86XT2 251 aa13.7□□□□□ -0.22
CPSF7-212ENST00000489728 ERC1Q8IUD2 1116 aa13.7□□□□□ -0.22
CPSF7-212ENST00000489728 TDRD7Q8NHU6 1098 aaKnown RBP13.7□□□□□ -0.22
CPSF7-212ENST00000489728 ADARB2Q9NS39 739 aaKnown RBP13.7□□□□□ -0.22
CPSF7-212ENST00000489728 SEMA3EO15041 775 aa13.69□□□□□ -0.22
CPSF7-212ENST00000489728 SURF6O75683 361 aaKnown RBP13.69□□□□□ -0.22
CPSF7-212ENST00000489728 GYG1P46976 350 aa13.69□□□□□ -0.22
CPSF7-212ENST00000489728 FSTL1Q12841 308 aa13.69□□□□□ -0.22
CPSF7-212ENST00000489728 TTLL5Q6EMB2 1281 aa13.69□□□□□ -0.22
CPSF7-212ENST00000489728 LDHDQ86WU2 507 aa13.69□□□□□ -0.22
CPSF7-212ENST00000489728 GMLQ99445 158 aa13.69□□□□□ -0.22
CPSF7-212ENST00000489728 KCNQ5Q9NR82 932 aa13.69□□□□□ -0.22
CPSF7-212ENST00000489728 H7C1D1 291 aa13.68□□□□□ -0.22
CPSF7-212ENST00000489728 TFCP2Q12800 502 aa13.68□□□□□ -0.22
CPSF7-212ENST00000489728 OS9Q13438 667 aaPredicted RBP13.68□□□□□ -0.22
CPSF7-212ENST00000489728 SMC1BQ8NDV3 1235 aa13.68□□□□□ -0.22
CPSF7-212ENST00000489728 GNL3LQ9NVN8 582 aaKnown RBP13.68□□□□□ -0.22
CPSF7-212ENST00000489728 CNOT7Q9UIV1 285 aaKnown RBP13.68□□□□□ -0.22
CPSF7-212ENST00000489728 PDS5AQ29RF7 1337 aaKnown RBP13.67□□□□□ -0.22
CPSF7-212ENST00000489728 MYH13Q9UKX3 1938 aa13.67□□□□□ -0.22
CPSF7-212ENST00000489728 A0A1B0GUL7 405 aa13.67□□□□□ -0.22
CPSF7-212ENST00000489728 RAB11FIP3O75154 756 aa13.67□□□□□ -0.22
CPSF7-212ENST00000489728 EPS15P42566 896 aa13.67□□□□□ -0.22
CPSF7-212ENST00000489728 ZNF280AP59817 542 aaPredicted RBP13.67□□□□□ -0.22
CPSF7-212ENST00000489728 GTF2IP78347 998 aa13.67□□□□□ -0.22
CPSF7-212ENST00000489728 SIRT2Q8IXJ6 389 aa13.67□□□□□ -0.22
CPSF7-212ENST00000489728 MICALL2Q8IY33 904 aa13.67□□□□□ -0.22
CPSF7-212ENST00000489728 ZC3H15Q8WU90 426 aaKnown RBP13.67□□□□□ -0.22
CPSF7-212ENST00000489728 TBC1D22AQ8WUA7 517 aa13.67□□□□□ -0.22
CPSF7-212ENST00000489728 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
CPSF7-212ENST00000489728 USP17L8P0C7I0 530 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms