RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 CNTROBQ8N137 903 aa20.02■□□□□ 0.8
CTDSP1-209ENST00000488627 GMLQ99445 158 aa20.02■□□□□ 0.8
CTDSP1-209ENST00000488627 USP17L3A6NCW0 530 aa20.01■□□□□ 0.79
CTDSP1-209ENST00000488627 USP17L4A6NCW7 530 aa20.01■□□□□ 0.79
CTDSP1-209ENST00000488627 KCNJ4P48050 445 aa20.01■□□□□ 0.79
CTDSP1-209ENST00000488627 LRRC24Q50LG9 513 aa20.01■□□□□ 0.79
CTDSP1-209ENST00000488627 RSBN1LQ6PCB5 846 aaPredicted RBP20.01■□□□□ 0.79
CTDSP1-209ENST00000488627 USP17L1Q7RTZ2 530 aa20.01■□□□□ 0.79
CTDSP1-209ENST00000488627 KLHDC4Q8TBB5 520 aa20.01■□□□□ 0.79
CTDSP1-209ENST00000488627 TRPM4Q8TD43 1214 aa20.01■□□□□ 0.79
CTDSP1-209ENST00000488627 PGAP2Q9UHJ9 254 aa20.01■□□□□ 0.79
CTDSP1-209ENST00000488627 ADAMTSL1Q8N6G6 1762 aa20■□□□□ 0.79
CTDSP1-209ENST00000488627 H7C1D1 291 aa20■□□□□ 0.79
CTDSP1-209ENST00000488627 PLIN1O60240 522 aa20■□□□□ 0.79
CTDSP1-209ENST00000488627 ZKSCAN2Q63HK3 967 aa20■□□□□ 0.79
CTDSP1-209ENST00000488627 CLUAP1Q96AJ1 413 aa20■□□□□ 0.79
CTDSP1-209ENST00000488627 LRRFIP2Q9Y608 721 aaKnown RBP20■□□□□ 0.79
CTDSP1-209ENST00000488627 EGFRP00533 1210 aa19.99■□□□□ 0.79
CTDSP1-209ENST00000488627 PTPN12Q05209 780 aaKnown RBP19.99■□□□□ 0.79
CTDSP1-209ENST00000488627 DACT2Q5SW24 774 aa19.99■□□□□ 0.79
CTDSP1-209ENST00000488627 SAMD7Q7Z3H4 446 aa19.99■□□□□ 0.79
CTDSP1-209ENST00000488627 AGBL3Q8NEM8 1001 aa19.99■□□□□ 0.79
CTDSP1-209ENST00000488627 CD209Q9NNX6 404 aa19.99■□□□□ 0.79
CTDSP1-209ENST00000488627 ZNF609O15014 1411 aa19.99■□□□□ 0.79
CTDSP1-209ENST00000488627 SCN9AQ15858 1988 aa19.98■□□□□ 0.79
CTDSP1-209ENST00000488627 UBE4AQ14139 1066 aa19.98■□□□□ 0.79
CTDSP1-209ENST00000488627 STRIP1Q5VSL9 837 aa19.98■□□□□ 0.79
CTDSP1-209ENST00000488627 VGLL2Q8N8G2 317 aa19.98■□□□□ 0.79
CTDSP1-209ENST00000488627 ZC3H15Q8WU90 426 aaKnown RBP19.98■□□□□ 0.79
CTDSP1-209ENST00000488627 MROH5Q6ZUA9 1318 aa19.98■□□□□ 0.79
CTDSP1-209ENST00000488627 GNAI3P08754 354 aa19.97■□□□□ 0.79
CTDSP1-209ENST00000488627 ZNF280AP59817 542 aaPredicted RBP19.97■□□□□ 0.79
CTDSP1-209ENST00000488627 TMEM57Q8N5G2 664 aa19.97■□□□□ 0.79
CTDSP1-209ENST00000488627 MXD3Q9BW11 206 aa19.97■□□□□ 0.79
CTDSP1-209ENST00000488627 HDAC5Q9UQL6 1122 aa19.97■□□□□ 0.79
CTDSP1-209ENST00000488627 IL1R1P14778 569 aa19.96■□□□□ 0.79
CTDSP1-209ENST00000488627 SPEF2Q9C093 1822 aa19.96■□□□□ 0.79
CTDSP1-209ENST00000488627 EYA2O00167 538 aa19.95■□□□□ 0.78
CTDSP1-209ENST00000488627 RLBP1P12271 317 aa19.95■□□□□ 0.78
CTDSP1-209ENST00000488627 FMR1Q06787 632 aaKnown RBP eCLIP19.95■□□□□ 0.78
CTDSP1-209ENST00000488627 TBC1D10BQ4KMP7 808 aaPredicted RBP19.95■□□□□ 0.78
CTDSP1-209ENST00000488627 TTLL5Q6EMB2 1281 aa19.95■□□□□ 0.78
CTDSP1-209ENST00000488627 ATG9AQ7Z3C6 839 aa19.95■□□□□ 0.78
CTDSP1-209ENST00000488627 FAM84BQ96KN1 310 aaPredicted RBP19.95■□□□□ 0.78
CTDSP1-209ENST00000488627 PDE8BO95263 885 aa19.94■□□□□ 0.78
CTDSP1-209ENST00000488627 USP17L8P0C7I0 530 aa19.94■□□□□ 0.78
CTDSP1-209ENST00000488627 GTF2IP78347 998 aa19.94■□□□□ 0.78
CTDSP1-209ENST00000488627 METTL24Q5JXM2 366 aa19.94■□□□□ 0.78
CTDSP1-209ENST00000488627 RBM26Q5T8P6 1007 aaKnown RBP19.94■□□□□ 0.78
CTDSP1-209ENST00000488627 CREBZFQ9NS37 354 aa19.94■□□□□ 0.78
CTDSP1-209ENST00000488627 TRAF5O00463 557 aa19.93■□□□□ 0.78
CTDSP1-209ENST00000488627 MTX1Q13505 466 aa19.93■□□□□ 0.78
CTDSP1-209ENST00000488627 ZNF804AQ7Z570 1209 aa19.93■□□□□ 0.78
CTDSP1-209ENST00000488627 DZIP1LQ8IYY4 767 aaKnown RBP19.93■□□□□ 0.78
CTDSP1-209ENST00000488627 FGFR2P21802 821 aa19.92■□□□□ 0.78
CTDSP1-209ENST00000488627 GYG1P46976 350 aa19.92■□□□□ 0.78
CTDSP1-209ENST00000488627 KIF4BQ2VIQ3 1234 aa19.92■□□□□ 0.78
CTDSP1-209ENST00000488627 FBXO33Q7Z6M2 555 aa19.92■□□□□ 0.78
CTDSP1-209ENST00000488627 TDRD7Q8NHU6 1098 aaKnown RBP19.92■□□□□ 0.78
CTDSP1-209ENST00000488627 KLRG1Q96E93 195 aa19.92■□□□□ 0.78
CTDSP1-209ENST00000488627 GLIS2Q9BZE0 524 aaPredicted RBP19.92■□□□□ 0.78
CTDSP1-209ENST00000488627 COPRSQ9NQ92 184 aa19.92■□□□□ 0.78
CTDSP1-209ENST00000488627 FBXO3Q9UK99 471 aa19.92■□□□□ 0.78
CTDSP1-209ENST00000488627 PA2G4Q9UQ80 394 aaKnown RBP19.92■□□□□ 0.78
CTDSP1-209ENST00000488627 TMEM88BA6NKF7 163 aa19.91■□□□□ 0.78
CTDSP1-209ENST00000488627 CIAO1O76071 339 aa19.91■□□□□ 0.78
CTDSP1-209ENST00000488627 GNAI2P04899 355 aa19.91■□□□□ 0.78
CTDSP1-209ENST00000488627 HIBADHP31937 336 aaKnown RBP19.91■□□□□ 0.78
CTDSP1-209ENST00000488627 CERS5Q8N5B7 392 aa19.91■□□□□ 0.78
CTDSP1-209ENST00000488627 FBXW7Q969H0 707 aa19.91■□□□□ 0.78
CTDSP1-209ENST00000488627 ZBTB7BO15156 539 aaPredicted RBP19.9■□□□□ 0.78
CTDSP1-209ENST00000488627 SASH1O94885 1247 aa19.9■□□□□ 0.78
CTDSP1-209ENST00000488627 CST9Q5W186 159 aa19.9■□□□□ 0.78
CTDSP1-209ENST00000488627 SIL1Q9H173 461 aa19.9■□□□□ 0.78
CTDSP1-209ENST00000488627 MYOZ2Q9NPC6 264 aa19.9■□□□□ 0.78
CTDSP1-209ENST00000488627 ASTN2O75129 1339 aaPredicted RBP19.9■□□□□ 0.78
CTDSP1-209ENST00000488627 MYO3BQ8WXR4 1341 aa19.9■□□□□ 0.78
CTDSP1-209ENST00000488627 CDC37L1Q7L3B6 337 aa19.89■□□□□ 0.77
CTDSP1-209ENST00000488627 FAM205AQ6ZU69 1335 aa19.88■□□□□ 0.77
CTDSP1-209ENST00000488627 SRGAP3O43295 1099 aa19.88■□□□□ 0.77
CTDSP1-209ENST00000488627 FKBP1AP62942 108 aaKnown RBP19.88■□□□□ 0.77
CTDSP1-209ENST00000488627 SCARF1Q14162 830 aa19.88■□□□□ 0.77
CTDSP1-209ENST00000488627 PUM3Q15397 648 aaKnown RBP19.88■□□□□ 0.77
CTDSP1-209ENST00000488627 DLK2Q6UY11 383 aa19.88■□□□□ 0.77
CTDSP1-209ENST00000488627 USP48Q86UV5 1035 aa19.88■□□□□ 0.77
CTDSP1-209ENST00000488627 FTSJ3Q8IY81 847 aaKnown RBP19.88■□□□□ 0.77
CTDSP1-209ENST00000488627 RCAN3Q9UKA8 241 aa19.88■□□□□ 0.77
CTDSP1-209ENST00000488627 PNMA6EA0A0J9YXQ4 647 aa19.87■□□□□ 0.77
CTDSP1-209ENST00000488627 IL15P40933 162 aaPredicted RBP19.87■□□□□ 0.77
CTDSP1-209ENST00000488627 MMP14P50281 582 aa19.87■□□□□ 0.77
CTDSP1-209ENST00000488627 KIAA0825Q8IV33 1275 aa19.87■□□□□ 0.77
CTDSP1-209ENST00000488627 JMYQ8N9B5 988 aa19.87■□□□□ 0.77
CTDSP1-209ENST00000488627 PANK1Q8TE04 598 aa19.87■□□□□ 0.77
CTDSP1-209ENST00000488627 JAG2Q9Y219 1238 aa19.87■□□□□ 0.77
CTDSP1-209ENST00000488627 A0A1B0GUL6 1792 aa19.86■□□□□ 0.77
CTDSP1-209ENST00000488627 BCAMP50895 628 aa19.86■□□□□ 0.77
CTDSP1-209ENST00000488627 KRT26Q7Z3Y9 468 aa19.86■□□□□ 0.77
CTDSP1-209ENST00000488627 ITPRIPQ8IWB1 547 aa19.86■□□□□ 0.77
CTDSP1-209ENST00000488627 OGFOD1Q8N543 542 aa19.86■□□□□ 0.77
CTDSP1-209ENST00000488627 LPIN2Q92539 896 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms