RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 DTWD1Q8N5C7 304 aa7.66□□□□□ -1.18
ITGB1-214ENST00000488427 LPIN3Q9BQK8 851 aa7.66□□□□□ -1.18
ITGB1-214ENST00000488427 PBX4Q9BYU1 374 aa7.66□□□□□ -1.18
ITGB1-214ENST00000488427 CNTN3Q9P232 1028 aa7.66□□□□□ -1.18
ITGB1-214ENST00000488427 KANSL3Q9P2N6 904 aa7.66□□□□□ -1.18
ITGB1-214ENST00000488427 SALL4Q9UJQ4 1053 aa7.66□□□□□ -1.18
ITGB1-214ENST00000488427 NAGPAQ9UK23 515 aa7.66□□□□□ -1.18
ITGB1-214ENST00000488427 STARD13Q9Y3M8 1113 aa7.66□□□□□ -1.18
ITGB1-214ENST00000488427 J3QW42 95 aa7.65□□□□□ -1.18
ITGB1-214ENST00000488427 APBA3O96018 575 aa7.65□□□□□ -1.18
ITGB1-214ENST00000488427 CABP4P57796 275 aa7.65□□□□□ -1.18
ITGB1-214ENST00000488427 COL19A1Q14993 1142 aa7.65□□□□□ -1.18
ITGB1-214ENST00000488427 TRAPPC3LQ5T215 181 aa7.65□□□□□ -1.18
ITGB1-214ENST00000488427 FAM117BQ6P1L5 589 aa7.65□□□□□ -1.18
ITGB1-214ENST00000488427 NIF3L1Q9GZT8 377 aa7.65□□□□□ -1.18
ITGB1-214ENST00000488427 PPP4R2Q9NY27 417 aa7.65□□□□□ -1.18
ITGB1-214ENST00000488427 FOXD3Q9UJU5 478 aaPredicted RBP7.65□□□□□ -1.18
ITGB1-214ENST00000488427 GPR182O15218 404 aa7.64□□□□□ -1.19
ITGB1-214ENST00000488427 TREHO43280 583 aa7.64□□□□□ -1.19
ITGB1-214ENST00000488427 AFF1P51825 1210 aaKnown RBP7.64□□□□□ -1.19
ITGB1-214ENST00000488427 TRIM28Q13263 835 aaKnown RBP7.64□□□□□ -1.19
ITGB1-214ENST00000488427 CEP135Q66GS9 1140 aa7.64□□□□□ -1.19
ITGB1-214ENST00000488427 CEP120Q8N960 986 aa7.64□□□□□ -1.19
ITGB1-214ENST00000488427 FBF1Q8TES7 1133 aa7.64□□□□□ -1.19
ITGB1-214ENST00000488427 NACC1Q96RE7 527 aa7.64□□□□□ -1.19
ITGB1-214ENST00000488427 CSRNP1Q96S65 589 aa7.64□□□□□ -1.19
ITGB1-214ENST00000488427 CHRDQ9H2X0 955 aa7.64□□□□□ -1.19
ITGB1-214ENST00000488427 NLRP2Q9NX02 1062 aa7.64□□□□□ -1.19
ITGB1-214ENST00000488427 SCO2A0A1W2PP80 73 aa7.63□□□□□ -1.19
ITGB1-214ENST00000488427 EIF1AYO14602 144 aaKnown RBP7.63□□□□□ -1.19
ITGB1-214ENST00000488427 EREGO14944 169 aa7.63□□□□□ -1.19
ITGB1-214ENST00000488427 CYP2E1P05181 493 aaPredicted RBP7.63□□□□□ -1.19
ITGB1-214ENST00000488427 RSPO4Q2I0M5 234 aaPredicted RBP7.63□□□□□ -1.19
ITGB1-214ENST00000488427 TMCO4Q5TGY1 634 aa7.63□□□□□ -1.19
ITGB1-214ENST00000488427 MSL1Q68DK7 614 aa7.63□□□□□ -1.19
ITGB1-214ENST00000488427 ALG1LQ6GMV1 187 aa7.63□□□□□ -1.19
ITGB1-214ENST00000488427 GALNT12Q8IXK2 581 aa7.63□□□□□ -1.19
ITGB1-214ENST00000488427 ZFYVE1Q9HBF4 777 aa7.63□□□□□ -1.19
ITGB1-214ENST00000488427 TRAK1Q9UPV9 953 aa7.63□□□□□ -1.19
ITGB1-214ENST00000488427 PDE2AO00408 941 aaPredicted RBP7.62□□□□□ -1.19
ITGB1-214ENST00000488427 CDC27P30260 824 aa7.62□□□□□ -1.19
ITGB1-214ENST00000488427 GDF6Q6KF10 455 aaPredicted RBP7.62□□□□□ -1.19
ITGB1-214ENST00000488427 TMEM102Q8N9M5 508 aaPredicted RBP7.62□□□□□ -1.19
ITGB1-214ENST00000488427 OSMRQ99650 979 aa7.62□□□□□ -1.19
ITGB1-214ENST00000488427 NID1P14543 1247 aa7.61□□□□□ -1.19
ITGB1-214ENST00000488427 RASSF4Q9H2L5 321 aa7.61□□□□□ -1.19
ITGB1-214ENST00000488427 TPSG1Q9NRR2 321 aa7.61□□□□□ -1.19
ITGB1-214ENST00000488427 DZANK1Q9NVP4 752 aa7.61□□□□□ -1.19
ITGB1-214ENST00000488427 PPME1Q9Y570 386 aa7.61□□□□□ -1.19
ITGB1-214ENST00000488427 GADD45BO75293 160 aaPredicted RBP7.6□□□□□ -1.19
ITGB1-214ENST00000488427 MAPK8P45983 427 aa7.6□□□□□ -1.19
ITGB1-214ENST00000488427 ARL4DP49703 201 aa7.6□□□□□ -1.19
ITGB1-214ENST00000488427 ORC1Q13415 861 aa7.6□□□□□ -1.19
ITGB1-214ENST00000488427 NKAPLQ5M9Q1 402 aa7.6□□□□□ -1.19
ITGB1-214ENST00000488427 COL13A1Q5TAT6 717 aaPredicted RBP7.6□□□□□ -1.19
ITGB1-214ENST00000488427 IL22RA1Q8N6P7 574 aa7.6□□□□□ -1.19
ITGB1-214ENST00000488427 PNMA6FA0A0J9YX94 578 aa7.59□□□□□ -1.19
ITGB1-214ENST00000488427 GIPC1O14908 333 aa7.59□□□□□ -1.19
ITGB1-214ENST00000488427 ATP11AP98196 1134 aa7.59□□□□□ -1.19
ITGB1-214ENST00000488427 FMR1Q06787 632 aaKnown RBP eCLIP7.59□□□□□ -1.19
ITGB1-214ENST00000488427 DSC3Q14574 896 aa7.59□□□□□ -1.19
ITGB1-214ENST00000488427 ENOX2Q16206 610 aaKnown RBP7.59□□□□□ -1.19
ITGB1-214ENST00000488427 DDX54Q8TDD1 881 aaKnown RBP7.59□□□□□ -1.19
ITGB1-214ENST00000488427 BSNDQ8WZ55 320 aa7.59□□□□□ -1.19
ITGB1-214ENST00000488427 WNT8BQ93098 351 aa7.59□□□□□ -1.19
ITGB1-214ENST00000488427 CCDC74AQ96AQ1 378 aa7.59□□□□□ -1.19
ITGB1-214ENST00000488427 FRMD6Q96NE9 622 aa7.59□□□□□ -1.19
ITGB1-214ENST00000488427 BHLHE41Q9C0J9 482 aaPredicted RBP7.59□□□□□ -1.19
ITGB1-214ENST00000488427 EHD4Q9H223 541 aa7.59□□□□□ -1.19
ITGB1-214ENST00000488427 DYRK3O43781 588 aa7.58□□□□□ -1.2
ITGB1-214ENST00000488427 IGHA2P01877 340 aa7.58□□□□□ -1.2
ITGB1-214ENST00000488427 ELNP15502 786 aa7.58□□□□□ -1.2
ITGB1-214ENST00000488427 KIAA0319Q5VV43 1072 aa7.58□□□□□ -1.2
ITGB1-214ENST00000488427 ZKSCAN3Q9BRR0 538 aa7.58□□□□□ -1.2
ITGB1-214ENST00000488427 SRCIN1Q9C0H9 1055 aa7.58□□□□□ -1.2
ITGB1-214ENST00000488427 ADAM19Q9H013 955 aa7.58□□□□□ -1.2
ITGB1-214ENST00000488427 LIN7BQ9HAP6 207 aa7.58□□□□□ -1.2
ITGB1-214ENST00000488427 TRIM33Q9UPN9 1127 aa7.58□□□□□ -1.2
ITGB1-214ENST00000488427 SPG7Q9UQ90 795 aa7.58□□□□□ -1.2
ITGB1-214ENST00000488427 ANKRD33BA6NCL7 494 aa7.57□□□□□ -1.2
ITGB1-214ENST00000488427 FAM229AH3BQW9 127 aa7.57□□□□□ -1.2
ITGB1-214ENST00000488427 XRCC5P13010 732 aaKnown RBP7.57□□□□□ -1.2
ITGB1-214ENST00000488427 HNRNPUQ00839 825 aaKnown RBP eCLIP7.57□□□□□ -1.2
ITGB1-214ENST00000488427 NRG1Q02297 640 aaPredicted RBP7.57□□□□□ -1.2
ITGB1-214ENST00000488427 EAPPQ56P03 285 aaPredicted RBP7.57□□□□□ -1.2
ITGB1-214ENST00000488427 C8orf86Q6ZUL3 223 aa7.57□□□□□ -1.2
ITGB1-214ENST00000488427 DMRTC2Q8IXT2 367 aaPredicted RBP7.57□□□□□ -1.2
ITGB1-214ENST00000488427 KRTAP9-2Q9BYQ4 174 aa7.57□□□□□ -1.2
ITGB1-214ENST00000488427 LACRTQ9GZZ8 138 aa7.57□□□□□ -1.2
ITGB1-214ENST00000488427 NPHS2Q9NP85 383 aa7.57□□□□□ -1.2
ITGB1-214ENST00000488427 A0A0A0MRY4 1105 aa7.56□□□□□ -1.2
ITGB1-214ENST00000488427 A0A1W2PP55 124 aa7.56□□□□□ -1.2
ITGB1-214ENST00000488427 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.56□□□□□ -1.2
ITGB1-214ENST00000488427 H3BRJ5 948 aa7.56□□□□□ -1.2
ITGB1-214ENST00000488427 POLR3DP05423 398 aaPredicted RBP7.56□□□□□ -1.2
ITGB1-214ENST00000488427 PIP4K2BP78356 416 aa7.56□□□□□ -1.2
ITGB1-214ENST00000488427 GRIK5Q16478 980 aa7.56□□□□□ -1.2
ITGB1-214ENST00000488427 KLHL23Q8NBE8 558 aa7.56□□□□□ -1.2
ITGB1-214ENST00000488427 ASAP3Q8TDY4 903 aa7.56□□□□□ -1.2
ITGB1-214ENST00000488427 NXPE3Q969Y0 559 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms