RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 NUDT18Q6ZVK8 323 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 RIC3Q7Z5B4 369 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 SYTL4Q96C24 671 aaPredicted RBP3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 GGNBP2Q9H3C7 697 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 RRAGCQ9HB90 399 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 HCSTQ9UBK5 93 aa3.64□□□□□ -1.83
DEPDC1-203ENST00000488146 ABCC12Q96J65 1359 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 MYO3BQ8WXR4 1341 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 TK2O00142 265 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 RRS1Q15050 365 aaKnown RBP3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 FOXD4L5Q5VV16 416 aaPredicted RBP3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 TPTE2Q6XPS3 522 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 CNBD1Q8NA66 436 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 FOXD4L4Q8WXT5 416 aaPredicted RBP3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 ZDHHC16Q969W1 377 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 RBM17Q96I25 401 aaKnown RBP3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 CFAP53Q96M91 514 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 EPAS1Q99814 870 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 EMILIN1Q9Y6C2 1016 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 A0A0G2JLW4 131 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 DIAPH1O60610 1272 aaKnown RBP3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 GNRH1P01148 92 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 LMOD1P29536 600 aaPredicted RBP3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 PSEN2P49810 448 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 EIF6P56537 245 aaKnown RBP3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 DEFB115Q30KQ5 88 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 DMRTA1Q5VZB9 504 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 ZNF790Q6PG37 636 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 C15orf52Q6ZUT6 534 aaKnown RBP3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 AMIGO3Q86WK7 504 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 SP8Q8IXZ3 490 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 TTC5Q8N0Z6 440 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 ADAMTS19Q8TE59 1207 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 EPS8L1Q8TE68 723 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 GLMNQ92990 594 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 CALR3Q96L12 384 aaKnown RBP3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 SETDB2Q96T68 719 aa3.63□□□□□ -1.83
DEPDC1-203ENST00000488146 AKAP11Q9UKA4 1901 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 MAP3K15Q6ZN16 1313 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 ALDH1A1P00352 501 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 OATP04181 439 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 EPHX2P34913 555 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 MLLT1Q03111 559 aaPredicted RBP3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 USPL1Q5W0Q7 1092 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 MSL1Q68DK7 614 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 MORC1Q86VD1 984 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 ABHD8Q96I13 439 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 NUDCQ9Y266 331 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 CACNA1SQ13698 1873 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 A0A1B0GUL6 1792 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 DLG5Q8TDM6 1919 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 SPDYE5A6NIY4 337 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 PRSS12P56730 875 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 INHBEP58166 350 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 ZNF280AP59817 542 aaPredicted RBP3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 ARHGEF6Q15052 776 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 PRPF40BQ6NWY9 871 aaKnown RBP3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 ZNF34Q8IZ26 560 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 RDH13Q8NBN7 331 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 SYMPKQ92797 1274 aaKnown RBP3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 DDX21Q9NR30 783 aaKnown RBP eCLIP3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 PLA2G2EQ9NZK7 142 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 KNSTRNQ9Y448 316 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 ATP6V0A2Q9Y487 856 aa3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 RPAP1Q9BWH6 1393 aaPredicted RBP3.62□□□□□ -1.83
DEPDC1-203ENST00000488146 FOXN1O15353 648 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 PER1O15534 1290 aaPredicted RBP3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 HRO43593 1189 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 VAC14Q08AM6 782 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 MAP3K11Q16584 847 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 ERFEQ4G0M1 354 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 PPP1R42Q7Z4L9 355 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 DNAJC10Q8IXB1 793 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 AGBL3Q8NEM8 1001 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 EYA3Q99504 573 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 GZF1Q9H116 711 aaPredicted RBP3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 TAF1P21675 1872 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 SLC10A3P09131 477 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 CTDSPL2Q05D32 466 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 KIAA2012Q0VF49 1180 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 SF3B3Q15393 1217 aaKnown RBP3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 COL13A1Q5TAT6 717 aaPredicted RBP3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 RSBN1LQ6PCB5 846 aaPredicted RBP3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 NUTM1Q86Y26 1132 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 NGEFQ8N5V2 710 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 LRRN4Q8WUT4 740 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 LTV1Q96GA3 475 aaPredicted RBP3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 SIN3AQ96ST3 1273 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 KCNK17Q96T54 332 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 TMX4Q9H1E5 349 aaPredicted RBP3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 PNMA3Q9UL41 463 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 ZNRF3Q9ULT6 936 aa3.61□□□□□ -1.83
DEPDC1-203ENST00000488146 USP17L8P0C7I0 530 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 CD46P15529 392 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 VEGFBP49765 207 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 CDC37L1Q7L3B6 337 aa3.6□□□□□ -1.83
DEPDC1-203ENST00000488146 CTU1Q7Z7A3 348 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms