RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 CCDC39Q9UFE4 941 aa16.43■□□□□ 0.22
COPS7B-221ENST00000488111 STAP2Q9UGK3 403 aa16.43■□□□□ 0.22
COPS7B-221ENST00000488111 FBXO3Q9UK99 471 aa16.43■□□□□ 0.22
COPS7B-221ENST00000488111 COL4A1P02462 1669 aa16.43■□□□□ 0.22
COPS7B-221ENST00000488111 MAP4K4O95819 1239 aaPredicted RBP16.43■□□□□ 0.22
COPS7B-221ENST00000488111 CDC5LQ99459 802 aaKnown RBP16.43■□□□□ 0.22
COPS7B-221ENST00000488111 DBNDD2Q9BQY9 259 aa16.43■□□□□ 0.22
COPS7B-221ENST00000488111 DBNLQ9UJU6 430 aaKnown RBP16.43■□□□□ 0.22
COPS7B-221ENST00000488111 RTL9Q8NET4 1388 aa16.42■□□□□ 0.22
COPS7B-221ENST00000488111 ANKRD18AQ8IVF6 992 aa16.42■□□□□ 0.22
COPS7B-221ENST00000488111 TAF5LO75529 589 aa16.42■□□□□ 0.22
COPS7B-221ENST00000488111 RABEP1Q15276 862 aa16.42■□□□□ 0.22
COPS7B-221ENST00000488111 PI4K2BQ8TCG2 481 aa16.42■□□□□ 0.22
COPS7B-221ENST00000488111 CCDC94Q9BW85 323 aaPredicted RBP16.42■□□□□ 0.22
COPS7B-221ENST00000488111 LAMB2P55268 1798 aa16.41■□□□□ 0.22
COPS7B-221ENST00000488111 A0A1B0GUL7 405 aa16.41■□□□□ 0.22
COPS7B-221ENST00000488111 SNAP23O00161 211 aa16.41■□□□□ 0.22
COPS7B-221ENST00000488111 NCLP19338 710 aaKnown RBP16.41■□□□□ 0.22
COPS7B-221ENST00000488111 DDX46Q7L014 1031 aaKnown RBP16.41■□□□□ 0.22
COPS7B-221ENST00000488111 ECHDC1Q9NTX5 307 aa16.41■□□□□ 0.22
COPS7B-221ENST00000488111 TNRC6CQ9HCJ0 1690 aaKnown RBP16.41■□□□□ 0.22
COPS7B-221ENST00000488111 SDSP20132 328 aa16.41■□□□□ 0.22
COPS7B-221ENST00000488111 DMTNQ08495 405 aa16.41■□□□□ 0.22
COPS7B-221ENST00000488111 TRIM6-TRIM34B2RNG4 842 aa16.4■□□□□ 0.22
COPS7B-221ENST00000488111 LRSAM1Q6UWE0 723 aa16.4■□□□□ 0.22
COPS7B-221ENST00000488111 RIC1Q4ADV7 1423 aa16.4■□□□□ 0.22
COPS7B-221ENST00000488111 CDC45O75419 566 aa16.4■□□□□ 0.22
COPS7B-221ENST00000488111 RPS8P62241 208 aaKnown RBP16.4■□□□□ 0.22
COPS7B-221ENST00000488111 SLC51AQ86UW1 340 aa16.4■□□□□ 0.22
COPS7B-221ENST00000488111 VGLL2Q8N8G2 317 aa16.4■□□□□ 0.22
COPS7B-221ENST00000488111 GPT2Q8TD30 523 aa16.4■□□□□ 0.22
COPS7B-221ENST00000488111 RILPL2Q969X0 211 aa16.4■□□□□ 0.22
COPS7B-221ENST00000488111 TAF1P21675 1872 aa16.39■□□□□ 0.22
COPS7B-221ENST00000488111 PDE8BO95263 885 aa16.39■□□□□ 0.21
COPS7B-221ENST00000488111 ADORA1P30542 326 aa16.39■□□□□ 0.21
COPS7B-221ENST00000488111 RPGRQ92834 1020 aaKnown RBP16.39■□□□□ 0.21
COPS7B-221ENST00000488111 GPATCH3Q96I76 525 aa16.39■□□□□ 0.21
COPS7B-221ENST00000488111 GPR108Q9NPR9 543 aa16.39■□□□□ 0.21
COPS7B-221ENST00000488111 TTC41PQ6P2S7 1318 aa16.39■□□□□ 0.21
COPS7B-221ENST00000488111 MROH5Q6ZUA9 1318 aa16.39■□□□□ 0.21
COPS7B-221ENST00000488111 CHRNDQ07001 517 aa16.38■□□□□ 0.21
COPS7B-221ENST00000488111 BOLA2Q9H3K6 86 aa16.38■□□□□ 0.21
COPS7B-221ENST00000488111 CWC22Q9HCG8 908 aaKnown RBP16.38■□□□□ 0.21
COPS7B-221ENST00000488111 AKAP2Q9Y2D5 859 aa16.38■□□□□ 0.21
COPS7B-221ENST00000488111 WTIPA6NIX2 430 aaPredicted RBP16.38■□□□□ 0.21
COPS7B-221ENST00000488111 ATP2B3Q16720 1220 aa16.38■□□□□ 0.21
COPS7B-221ENST00000488111 BSDC1Q9NW68 430 aaPredicted RBP16.38■□□□□ 0.21
COPS7B-221ENST00000488111 ZNF609O15014 1411 aa16.37■□□□□ 0.21
COPS7B-221ENST00000488111 GLRX3O76003 335 aaKnown RBP16.37■□□□□ 0.21
COPS7B-221ENST00000488111 R3HDM1Q15032 1099 aaKnown RBP16.37■□□□□ 0.21
COPS7B-221ENST00000488111 CRY2Q49AN0 593 aa16.37■□□□□ 0.21
COPS7B-221ENST00000488111 XAGE2Q96GT9 111 aa16.37■□□□□ 0.21
COPS7B-221ENST00000488111 BRIP1Q9BX63 1249 aa16.37■□□□□ 0.21
COPS7B-221ENST00000488111 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
COPS7B-221ENST00000488111 NDUFB9Q9Y6M9 179 aa16.37■□□□□ 0.21
COPS7B-221ENST00000488111 AOX1Q06278 1338 aa16.37■□□□□ 0.21
COPS7B-221ENST00000488111 ERC2O15083 957 aa16.37■□□□□ 0.21
COPS7B-221ENST00000488111 ZBTB7AO95365 584 aa16.37■□□□□ 0.21
COPS7B-221ENST00000488111 MYRIPQ8NFW9 859 aa16.37■□□□□ 0.21
COPS7B-221ENST00000488111 MINPP1Q9UNW1 487 aa16.37■□□□□ 0.21
COPS7B-221ENST00000488111 PRPF40AO75400 957 aaKnown RBP16.36■□□□□ 0.21
COPS7B-221ENST00000488111 ZSCAN20P17040 1043 aaPredicted RBP16.36■□□□□ 0.21
COPS7B-221ENST00000488111 GRAPQ13588 217 aa16.36■□□□□ 0.21
COPS7B-221ENST00000488111 PKP1Q13835 747 aa16.36■□□□□ 0.21
COPS7B-221ENST00000488111 GORABQ5T7V8 394 aa16.36■□□□□ 0.21
COPS7B-221ENST00000488111 GRAPLQ8TC17 118 aaPredicted RBP16.36■□□□□ 0.21
COPS7B-221ENST00000488111 TMEM63CQ9P1W3 806 aa16.36■□□□□ 0.21
COPS7B-221ENST00000488111 CASZ1Q86V15 1759 aa16.35■□□□□ 0.21
COPS7B-221ENST00000488111 ILDR2Q71H61 639 aa16.35■□□□□ 0.21
COPS7B-221ENST00000488111 RBM17Q96I25 401 aaKnown RBP16.35■□□□□ 0.21
COPS7B-221ENST00000488111 PRDM10Q9NQV6 1147 aa16.35■□□□□ 0.21
COPS7B-221ENST00000488111 LRP5O75197 1615 aa16.35■□□□□ 0.21
COPS7B-221ENST00000488111 KLRG2A4D1S0 409 aaPredicted RBP16.35■□□□□ 0.21
COPS7B-221ENST00000488111 PSDA5PKW4 1024 aaPredicted RBP16.35■□□□□ 0.21
COPS7B-221ENST00000488111 PUM3Q15397 648 aaKnown RBP16.35■□□□□ 0.21
COPS7B-221ENST00000488111 EDC3Q96F86 508 aaKnown RBP16.35■□□□□ 0.21
COPS7B-221ENST00000488111 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
COPS7B-221ENST00000488111 SPEF2Q9C093 1822 aa16.34■□□□□ 0.21
COPS7B-221ENST00000488111 ATP5JP18859 108 aa16.34■□□□□ 0.21
COPS7B-221ENST00000488111 FGFR2P21802 821 aa16.34■□□□□ 0.21
COPS7B-221ENST00000488111 KIAA2012Q0VF49 1180 aa16.34■□□□□ 0.21
COPS7B-221ENST00000488111 LPIN2Q92539 896 aa16.34■□□□□ 0.21
COPS7B-221ENST00000488111 ARID3AQ99856 593 aa16.34■□□□□ 0.21
COPS7B-221ENST00000488111 ZHX1Q9UKY1 873 aaPredicted RBP16.34■□□□□ 0.21
COPS7B-221ENST00000488111 ZDHHC9Q9Y397 364 aa16.34■□□□□ 0.21
COPS7B-221ENST00000488111 AK9Q5TCS8 1911 aa16.33■□□□□ 0.2
COPS7B-221ENST00000488111 PDE6BP35913 854 aa16.33■□□□□ 0.2
COPS7B-221ENST00000488111 SLC16A10Q8TF71 515 aa16.33■□□□□ 0.2
COPS7B-221ENST00000488111 DNAJC2Q99543 621 aaKnown RBP16.33■□□□□ 0.2
COPS7B-221ENST00000488111 QSER1Q2KHR3 1735 aa16.33■□□□□ 0.2
COPS7B-221ENST00000488111 SYCE3A1L190 88 aa16.33■□□□□ 0.2
COPS7B-221ENST00000488111 SRGNP10124 158 aa16.33■□□□□ 0.2
COPS7B-221ENST00000488111 CCDC158Q5M9N0 1113 aa16.33■□□□□ 0.2
COPS7B-221ENST00000488111 HOXA10P31260 410 aaPredicted RBP16.32■□□□□ 0.2
COPS7B-221ENST00000488111 GTF2F1P35269 517 aaKnown RBP eCLIP16.32■□□□□ 0.2
COPS7B-221ENST00000488111 TTC39AQ5SRH9 613 aa16.32■□□□□ 0.2
COPS7B-221ENST00000488111 CNTROBQ8N137 903 aa16.32■□□□□ 0.2
COPS7B-221ENST00000488111 PRIMPOLQ96LW4 560 aa16.32■□□□□ 0.2
COPS7B-221ENST00000488111 USP26Q9BXU7 913 aa16.32■□□□□ 0.2
COPS7B-221ENST00000488111 NRXN2Q9P2S2 1712 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms