RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 PODXL2Q9NZ53 605 aa12.84□□□□□ -0.35
PTPN7-213ENST00000486116 A0A1W2PPC1 479 aa12.83□□□□□ -0.36
PTPN7-213ENST00000486116 PER1O15534 1290 aaPredicted RBP12.83□□□□□ -0.36
PTPN7-213ENST00000486116 SASH1O94885 1247 aa12.83□□□□□ -0.36
PTPN7-213ENST00000486116 EIF4G2P78344 907 aaKnown RBP eCLIP12.83□□□□□ -0.36
PTPN7-213ENST00000486116 SF3B3Q15393 1217 aaKnown RBP12.83□□□□□ -0.36
PTPN7-213ENST00000486116 HSP90AB3PQ58FF7 597 aa12.83□□□□□ -0.36
PTPN7-213ENST00000486116 SLC10A4Q96EP9 437 aa12.83□□□□□ -0.36
PTPN7-213ENST00000486116 ZBTB7BO15156 539 aaPredicted RBP12.82□□□□□ -0.36
PTPN7-213ENST00000486116 GJA5P36382 358 aa12.82□□□□□ -0.36
PTPN7-213ENST00000486116 MAP3K11Q16584 847 aa12.82□□□□□ -0.36
PTPN7-213ENST00000486116 UBE2Q1Q7Z7E8 422 aa12.82□□□□□ -0.36
PTPN7-213ENST00000486116 PNISRQ8TF01 805 aaKnown RBP12.82□□□□□ -0.36
PTPN7-213ENST00000486116 MXD3Q9BW11 206 aa12.82□□□□□ -0.36
PTPN7-213ENST00000486116 COL1A1P02452 1464 aaPredicted RBP12.82□□□□□ -0.36
PTPN7-213ENST00000486116 VCANP13611 3396 aa12.82□□□□□ -0.36
PTPN7-213ENST00000486116 USP17L3A6NCW0 530 aa12.81□□□□□ -0.36
PTPN7-213ENST00000486116 USP17L4A6NCW7 530 aa12.81□□□□□ -0.36
PTPN7-213ENST00000486116 USP17L1Q7RTZ2 530 aa12.81□□□□□ -0.36
PTPN7-213ENST00000486116 GGA1Q9UJY5 639 aa12.81□□□□□ -0.36
PTPN7-213ENST00000486116 TESPA1A2RU30 521 aaPredicted RBP12.8□□□□□ -0.36
PTPN7-213ENST00000486116 RPS8P62241 208 aaKnown RBP12.8□□□□□ -0.36
PTPN7-213ENST00000486116 OTUD7BQ6GQQ9 843 aa12.8□□□□□ -0.36
PTPN7-213ENST00000486116 APOBEC3FQ8IUX4 373 aaKnown RBP12.8□□□□□ -0.36
PTPN7-213ENST00000486116 ANKIB1Q9P2G1 1089 aa12.8□□□□□ -0.36
PTPN7-213ENST00000486116 STXBP5LQ9Y2K9 1186 aa12.8□□□□□ -0.36
PTPN7-213ENST00000486116 MTFR1Q15390 333 aa12.79□□□□□ -0.36
PTPN7-213ENST00000486116 DACT2Q5SW24 774 aa12.79□□□□□ -0.36
PTPN7-213ENST00000486116 Q7L0L9 218 aa12.79□□□□□ -0.36
PTPN7-213ENST00000486116 COPS6Q7L5N1 327 aa12.79□□□□□ -0.36
PTPN7-213ENST00000486116 DEFB123Q8N688 67 aa12.79□□□□□ -0.36
PTPN7-213ENST00000486116 XAGE3Q8WTP9 111 aa12.79□□□□□ -0.36
PTPN7-213ENST00000486116 FAM89AQ96GI7 184 aa12.79□□□□□ -0.36
PTPN7-213ENST00000486116 U2AF1L5P0DN76 240 aaPredicted RBP12.78□□□□□ -0.36
PTPN7-213ENST00000486116 EIF2S2P20042 333 aaKnown RBP12.78□□□□□ -0.36
PTPN7-213ENST00000486116 U2AF1Q01081 240 aaKnown RBP eCLIP12.78□□□□□ -0.36
PTPN7-213ENST00000486116 AIMP1Q12904 312 aaKnown RBP12.78□□□□□ -0.36
PTPN7-213ENST00000486116 PODNQ7Z5L7 613 aa12.78□□□□□ -0.36
PTPN7-213ENST00000486116 ZBED3Q96IU2 234 aaPredicted RBP12.78□□□□□ -0.36
PTPN7-213ENST00000486116 HTATIP2Q9BUP3 242 aa12.78□□□□□ -0.36
PTPN7-213ENST00000486116 ARHGAP39Q9C0H5 1083 aa12.78□□□□□ -0.36
PTPN7-213ENST00000486116 SEC31BQ9NQW1 1179 aa12.78□□□□□ -0.36
PTPN7-213ENST00000486116 NR2E3Q9Y5X4 410 aa12.78□□□□□ -0.36
PTPN7-213ENST00000486116 CNGB1Q14028 1251 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-213ENST00000486116 ARHGEF6Q15052 776 aa12.77□□□□□ -0.37
PTPN7-213ENST00000486116 GPR153Q6NV75 609 aa12.77□□□□□ -0.37
PTPN7-213ENST00000486116 OGFOD1Q8N543 542 aa12.77□□□□□ -0.37
PTPN7-213ENST00000486116 MGAMO43451 1857 aa12.76□□□□□ -0.37
PTPN7-213ENST00000486116 RTL5Q5HYW3 569 aaPredicted RBP12.76□□□□□ -0.37
PTPN7-213ENST00000486116 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTPN7-213ENST00000486116 MS4A4AQ96JQ5 239 aa12.76□□□□□ -0.37
PTPN7-213ENST00000486116 DEFB129Q9H1M3 183 aa12.76□□□□□ -0.37
PTPN7-213ENST00000486116 STAP2Q9UGK3 403 aa12.76□□□□□ -0.37
PTPN7-213ENST00000486116 UNCXA6NJT0 531 aa12.75□□□□□ -0.37
PTPN7-213ENST00000486116 PPP1R12BO60237 982 aaPredicted RBP12.75□□□□□ -0.37
PTPN7-213ENST00000486116 XDHP47989 1333 aa12.75□□□□□ -0.37
PTPN7-213ENST00000486116 GJA8P48165 433 aa12.75□□□□□ -0.37
PTPN7-213ENST00000486116 TAF1CQ15572 869 aaPredicted RBP12.75□□□□□ -0.37
PTPN7-213ENST00000486116 ANKRD13DQ6ZTN6 518 aa12.75□□□□□ -0.37
PTPN7-213ENST00000486116 MYO3BQ8WXR4 1341 aa12.75□□□□□ -0.37
PTPN7-213ENST00000486116 BRI3BPQ8WY22 251 aa12.75□□□□□ -0.37
PTPN7-213ENST00000486116 ISCA1Q9BUE6 129 aa12.75□□□□□ -0.37
PTPN7-213ENST00000486116 MTMR10Q9NXD2 777 aa12.75□□□□□ -0.37
PTPN7-213ENST00000486116 TIMELESSQ9UNS1 1208 aa12.75□□□□□ -0.37
PTPN7-213ENST00000486116 MYH3P11055 1940 aa12.74□□□□□ -0.37
PTPN7-213ENST00000486116 MED23Q9ULK4 1368 aa12.74□□□□□ -0.37
PTPN7-213ENST00000486116 IRS4O14654 1257 aaPredicted RBP12.74□□□□□ -0.37
PTPN7-213ENST00000486116 FBXW7Q969H0 707 aa12.74□□□□□ -0.37
PTPN7-213ENST00000486116 CFAP53Q96M91 514 aa12.74□□□□□ -0.37
PTPN7-213ENST00000486116 ZFYVE28Q9HCC9 887 aa12.74□□□□□ -0.37
PTPN7-213ENST00000486116 PRDM6Q9NQX0 595 aa12.74□□□□□ -0.37
PTPN7-213ENST00000486116 NUDCQ9Y266 331 aa12.74□□□□□ -0.37
PTPN7-213ENST00000486116 ATP5J2-PTCD1G3V325 749 aa12.73□□□□□ -0.37
PTPN7-213ENST00000486116 USP2O75604 605 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-213ENST00000486116 GJB1P08034 283 aa12.73□□□□□ -0.37
PTPN7-213ENST00000486116 LACTBP83111 547 aaPredicted RBP12.73□□□□□ -0.37
PTPN7-213ENST00000486116 STRIP1Q5VSL9 837 aa12.73□□□□□ -0.37
PTPN7-213ENST00000486116 KIAA0825Q8IV33 1275 aa12.73□□□□□ -0.37
PTPN7-213ENST00000486116 FAM43AQ8N2R8 423 aa12.73□□□□□ -0.37
PTPN7-213ENST00000486116 NKX2-3Q8TAU0 364 aa12.73□□□□□ -0.37
PTPN7-213ENST00000486116 OPTNQ96CV9 577 aa12.73□□□□□ -0.37
PTPN7-213ENST00000486116 ARAP2Q8WZ64 1704 aa12.73□□□□□ -0.37
PTPN7-213ENST00000486116 FARP2O94887 1054 aaPredicted RBP12.72□□□□□ -0.37
PTPN7-213ENST00000486116 CCL5P13501 91 aa12.72□□□□□ -0.37
PTPN7-213ENST00000486116 ATP2B4P23634 1241 aa12.72□□□□□ -0.37
PTPN7-213ENST00000486116 IREB2P48200 963 aaKnown RBP12.72□□□□□ -0.37
PTPN7-213ENST00000486116 NBPF12Q5TAG4 269 aaPredicted RBP12.72□□□□□ -0.37
PTPN7-213ENST00000486116 ANKRD13AQ8IZ07 590 aa12.72□□□□□ -0.37
PTPN7-213ENST00000486116 CNKSR2Q8WXI2 1034 aa12.72□□□□□ -0.37
PTPN7-213ENST00000486116 ELP3Q9H9T3 547 aa12.72□□□□□ -0.37
PTPN7-213ENST00000486116 PPP2R3BQ9Y5P8 575 aa12.72□□□□□ -0.37
PTPN7-213ENST00000486116 ZNF804BA4D1E1 1349 aa12.71□□□□□ -0.37
PTPN7-213ENST00000486116 CCL15-CCL14A0A0B4J2E2 113 aa12.71□□□□□ -0.37
PTPN7-213ENST00000486116 EVI5O60447 810 aa12.71□□□□□ -0.37
PTPN7-213ENST00000486116 CTGFP29279 349 aa12.71□□□□□ -0.37
PTPN7-213ENST00000486116 MMP14P50281 582 aa12.71□□□□□ -0.37
PTPN7-213ENST00000486116 PRMT2P55345 433 aa12.71□□□□□ -0.37
PTPN7-213ENST00000486116 CCL15Q16663 113 aa12.71□□□□□ -0.37
PTPN7-213ENST00000486116 GDF15Q99988 308 aa12.71□□□□□ -0.37
PTPN7-213ENST00000486116 PCDHAC2Q9Y5I4 1007 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms