RNA–Protein interactions for RNA: ENST00000484562.5

PATJ-207, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,448 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-207ENST00000484562 USP48Q86UV5 1035 aa12.38□□□□□ -0.43
PATJ-207ENST00000484562 PUS7Q96PZ0 661 aaKnown RBP12.38□□□□□ -0.43
PATJ-207ENST00000484562 SERPINA10Q9UK55 444 aa12.38□□□□□ -0.43
PATJ-207ENST00000484562 FAM13AO94988 1023 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 ATL3Q6DD88 541 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 NAP1L3Q99457 506 aaPredicted RBP12.37□□□□□ -0.43
PATJ-207ENST00000484562 ATP5J2-PTCD1G3V325 749 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 EEF2P13639 858 aaKnown RBP12.37□□□□□ -0.43
PATJ-207ENST00000484562 SDSP20132 328 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 RFC4P35249 363 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 TRMT1LQ7Z2T5 733 aaKnown RBP12.37□□□□□ -0.43
PATJ-207ENST00000484562 BRAPQ7Z569 592 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 DACT1Q9NYF0 836 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 CNPY2Q9Y2B0 182 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 ZKSCAN5Q9Y2L8 839 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 RALGAPBQ86X10 1494 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 PLCG2P16885 1265 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 ZWINTO95229 277 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 CAPN2P17655 700 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 SELENOSQ9BQE4 189 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
PATJ-207ENST00000484562 SAMD15Q9P1V8 674 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 MKRN1Q9UHC7 482 aaKnown RBP12.37□□□□□ -0.43
PATJ-207ENST00000484562 AMOTL2Q9Y2J4 779 aa12.37□□□□□ -0.43
PATJ-207ENST00000484562 ATP5DP30049 168 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 PDE1AP54750 535 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 PLCB3Q01970 1234 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 NBPF6Q5VWK0 638 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 NAA16Q6N069 864 aaPredicted RBP12.36□□□□□ -0.43
PATJ-207ENST00000484562 NBPF5PQ86XG9 351 aaPredicted RBP12.36□□□□□ -0.43
PATJ-207ENST00000484562 RGS22Q8NE09 1264 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 NBPF4Q96M43 638 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 ATP6V0A2Q9Y487 856 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 TTC41PQ6P2S7 1318 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 CALCOCO2Q13137 446 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 PAXIP1Q6ZW49 1069 aaPredicted RBP12.36□□□□□ -0.43
PATJ-207ENST00000484562 NECAB1Q8N987 351 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 RRP36Q96EU6 259 aaKnown RBP12.36□□□□□ -0.43
PATJ-207ENST00000484562 PSMC4P43686 418 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 Q6ZUG5 572 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 CPLX4Q7Z7G2 160 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 RAB11FIP4Q86YS3 637 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 CCDC160A6NGH7 325 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 SPDYE3A6NKU9 549 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 GNA11P29992 359 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 KRT2P35908 639 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 CCDC50Q8IVM0 306 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 CSRNP2Q9H175 543 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 PRXQ9BXM0 1461 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 RPL13P26373 211 aaKnown RBP12.36□□□□□ -0.43
PATJ-207ENST00000484562 SNX16P57768 344 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 APBB1IPQ7Z5R6 666 aaPredicted RBP12.36□□□□□ -0.43
PATJ-207ENST00000484562 CNGA4Q8IV77 575 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 ANKRD44Q8N8A2 993 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 TCHPQ9BT92 498 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 DNAJC25Q9H1X3 360 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 FAM169AQ9Y6X4 670 aa12.36□□□□□ -0.43
PATJ-207ENST00000484562 ZNF804AQ7Z570 1209 aa12.35□□□□□ -0.43
PATJ-207ENST00000484562 NPHP3Q7Z494 1330 aa12.35□□□□□ -0.43
PATJ-207ENST00000484562 PTGS1P23219 599 aa12.35□□□□□ -0.43
PATJ-207ENST00000484562 TUBB2AQ13885 445 aa12.35□□□□□ -0.43
PATJ-207ENST00000484562 PPFIBP2Q8ND30 876 aa12.35□□□□□ -0.43
PATJ-207ENST00000484562 DHX58Q96C10 678 aa12.35□□□□□ -0.43
PATJ-207ENST00000484562 TUBB2BQ9BVA1 445 aa12.35□□□□□ -0.43
PATJ-207ENST00000484562 TPD52P55327 224 aaPredicted RBP12.35□□□□□ -0.43
PATJ-207ENST00000484562 ATP8B2P98198 1209 aa12.35□□□□□ -0.43
PATJ-207ENST00000484562 KRT28Q7Z3Y7 464 aa12.35□□□□□ -0.43
PATJ-207ENST00000484562 TRIM7Q9C029 511 aa12.35□□□□□ -0.43
PATJ-207ENST00000484562 FOXO3O43524 673 aa12.35□□□□□ -0.43
PATJ-207ENST00000484562 SEPT6Q14141 434 aa12.35□□□□□ -0.43
PATJ-207ENST00000484562 LUC7L2Q9Y383 392 aaKnown RBP12.35□□□□□ -0.43
PATJ-207ENST00000484562 RAD50Q92878 1312 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 GMNNO75496 209 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 UBXN1Q04323 297 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 TYRO3Q06418 890 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 CFAP58Q5T655 872 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 MICALL1Q8N3F8 863 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.34□□□□□ -0.43
PATJ-207ENST00000484562 NGLY1Q96IV0 654 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 ODF2LQ9ULJ1 636 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 A6NNZ2 444 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 TUBB8Q3ZCM7 444 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 CFAP157Q5JU67 520 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 SEL1L2Q5TEA6 688 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 OGFOD1Q8N543 542 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 ZNF622Q969S3 477 aaKnown RBP eCLIP12.34□□□□□ -0.43
PATJ-207ENST00000484562 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
PATJ-207ENST00000484562 ARID4AP29374 1257 aaPredicted RBP12.34□□□□□ -0.43
PATJ-207ENST00000484562 LACTBP83111 547 aaPredicted RBP12.34□□□□□ -0.43
PATJ-207ENST00000484562 VWA3BQ502W6 1294 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 GPR161Q8N6U8 529 aaKnown RBP12.34□□□□□ -0.43
PATJ-207ENST00000484562 IQUBQ8NA54 791 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 CCDC26Q8TAB7 109 aa12.34□□□□□ -0.43
PATJ-207ENST00000484562 GRM8O00222 908 aa12.33□□□□□ -0.43
PATJ-207ENST00000484562 GAS8O95995 478 aa12.33□□□□□ -0.43
PATJ-207ENST00000484562 MARCKSP29966 332 aaPredicted RBP12.33□□□□□ -0.43
PATJ-207ENST00000484562 PPP1R7Q15435 360 aa12.33□□□□□ -0.43
PATJ-207ENST00000484562 NLRP3Q96P20 1036 aa12.33□□□□□ -0.43
PATJ-207ENST00000484562 ZHX1Q9UKY1 873 aaPredicted RBP12.33□□□□□ -0.43
PATJ-207ENST00000484562 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms