RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 MTHFSP49914 203 aa9.17□□□□□ -0.94
CHD6-209ENST00000482596 ZNF530Q6P9A1 599 aaPredicted RBP9.17□□□□□ -0.94
CHD6-209ENST00000482596 USP38Q8NB14 1042 aa9.17□□□□□ -0.94
CHD6-209ENST00000482596 C1QTNF1Q9BXJ1 281 aa9.17□□□□□ -0.94
CHD6-209ENST00000482596 SSC5DA1L4H1 1573 aa9.16□□□□□ -0.94
CHD6-209ENST00000482596 HOXB1P14653 301 aaPredicted RBP9.16□□□□□ -0.94
CHD6-209ENST00000482596 EMP3P54852 163 aa9.16□□□□□ -0.94
CHD6-209ENST00000482596 PTPN12Q05209 780 aaKnown RBP9.16□□□□□ -0.94
CHD6-209ENST00000482596 SPRYD7Q5W111 196 aa9.16□□□□□ -0.94
CHD6-209ENST00000482596 ZSWIM6Q9HCJ5 1215 aa9.16□□□□□ -0.94
CHD6-209ENST00000482596 COL2A1P02458 1487 aaPredicted RBP9.15□□□□□ -0.94
CHD6-209ENST00000482596 KIF24Q5T7B8 1368 aa9.15□□□□□ -0.94
CHD6-209ENST00000482596 WASHC2AQ641Q2 1341 aa9.15□□□□□ -0.94
CHD6-209ENST00000482596 TTLL12Q14166 644 aaPredicted RBP9.15□□□□□ -0.94
CHD6-209ENST00000482596 KIF4BQ2VIQ3 1234 aa9.15□□□□□ -0.94
CHD6-209ENST00000482596 ZNF697Q5TEC3 545 aa9.15□□□□□ -0.94
CHD6-209ENST00000482596 ANGEL2Q5VTE6 544 aaKnown RBP9.15□□□□□ -0.94
CHD6-209ENST00000482596 C7orf61Q8IZ16 206 aa9.15□□□□□ -0.94
CHD6-209ENST00000482596 ADAMTS19Q8TE59 1207 aa9.15□□□□□ -0.94
CHD6-209ENST00000482596 DPF2Q92785 391 aa9.15□□□□□ -0.94
CHD6-209ENST00000482596 UBE2OQ9C0C9 1292 aaKnown RBP9.15□□□□□ -0.94
CHD6-209ENST00000482596 GPHNQ9NQX3 736 aaPredicted RBP9.15□□□□□ -0.94
CHD6-209ENST00000482596 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.15□□□□□ -0.94
CHD6-209ENST00000482596 RAB3GAP2Q9H2M9 1393 aa9.14□□□□□ -0.95
CHD6-209ENST00000482596 PSMD14O00487 310 aa9.14□□□□□ -0.95
CHD6-209ENST00000482596 FYB1O15117 783 aa9.14□□□□□ -0.95
CHD6-209ENST00000482596 CRY2Q49AN0 593 aa9.14□□□□□ -0.95
CHD6-209ENST00000482596 NKX2-3Q8TAU0 364 aa9.14□□□□□ -0.95
CHD6-209ENST00000482596 UHRF1Q96T88 793 aaPredicted RBP9.14□□□□□ -0.95
CHD6-209ENST00000482596 ARHGAP39Q9C0H5 1083 aa9.14□□□□□ -0.95
CHD6-209ENST00000482596 UBR2Q8IWV8 1755 aa9.14□□□□□ -0.95
CHD6-209ENST00000482596 RIC1Q4ADV7 1423 aa9.14□□□□□ -0.95
CHD6-209ENST00000482596 ABCC12Q96J65 1359 aa9.13□□□□□ -0.95
CHD6-209ENST00000482596 CFAP54Q96N23 3096 aa9.13□□□□□ -0.95
CHD6-209ENST00000482596 MANSC4A6NHS7 340 aaPredicted RBP9.13□□□□□ -0.95
CHD6-209ENST00000482596 PPM1GO15355 546 aaPredicted RBP9.13□□□□□ -0.95
CHD6-209ENST00000482596 GJB1P08034 283 aa9.13□□□□□ -0.95
CHD6-209ENST00000482596 CCL5P13501 91 aa9.13□□□□□ -0.95
CHD6-209ENST00000482596 FOSL2P15408 326 aa9.13□□□□□ -0.95
CHD6-209ENST00000482596 GRIPAP1Q4V328 841 aa9.13□□□□□ -0.95
CHD6-209ENST00000482596 CDAN1Q8IWY9 1227 aa9.13□□□□□ -0.95
CHD6-209ENST00000482596 VPS33BQ9H267 617 aa9.13□□□□□ -0.95
CHD6-209ENST00000482596 TCF20Q9UGU0 1960 aaKnown RBP9.13□□□□□ -0.95
CHD6-209ENST00000482596 FOXK1P85037 733 aa9.12□□□□□ -0.95
CHD6-209ENST00000482596 KIAA2012Q0VF49 1180 aa9.12□□□□□ -0.95
CHD6-209ENST00000482596 TCIRG1Q13488 830 aa9.12□□□□□ -0.95
CHD6-209ENST00000482596 PRKG1Q13976 671 aa9.12□□□□□ -0.95
CHD6-209ENST00000482596 TPTE2Q6XPS3 522 aa9.12□□□□□ -0.95
CHD6-209ENST00000482596 U2AF1L4Q8WU68 220 aaKnown RBP9.12□□□□□ -0.95
CHD6-209ENST00000482596 NECAB3Q96P71 396 aaPredicted RBP9.12□□□□□ -0.95
CHD6-209ENST00000482596 SEMA6BQ9H3T3 888 aa9.12□□□□□ -0.95
CHD6-209ENST00000482596 CACNA1BQ00975 2339 aa9.12□□□□□ -0.95
CHD6-209ENST00000482596 WDFY4Q6ZS81 3184 aa9.12□□□□□ -0.95
CHD6-209ENST00000482596 USP34Q70CQ2 3546 aa9.11□□□□□ -0.95
CHD6-209ENST00000482596 ZDBF2Q9HCK1 2354 aa9.11□□□□□ -0.95
CHD6-209ENST00000482596 KIF20BQ96Q89 1820 aa9.11□□□□□ -0.95
CHD6-209ENST00000482596 FAM205CA6NFA0 338 aa9.11□□□□□ -0.95
CHD6-209ENST00000482596 INHBEP58166 350 aa9.11□□□□□ -0.95
CHD6-209ENST00000482596 SCARF1Q14162 830 aa9.11□□□□□ -0.95
CHD6-209ENST00000482596 PLPP6Q8IY26 295 aa9.11□□□□□ -0.95
CHD6-209ENST00000482596 SPRYD3Q8NCJ5 442 aa9.11□□□□□ -0.95
CHD6-209ENST00000482596 COL26A1Q96A83 441 aa9.11□□□□□ -0.95
CHD6-209ENST00000482596 PTPN18Q99952 460 aa9.11□□□□□ -0.95
CHD6-209ENST00000482596 RTFDC1Q9BY42 306 aaPredicted RBP9.11□□□□□ -0.95
CHD6-209ENST00000482596 RNF208Q9H0X6 261 aa9.11□□□□□ -0.95
CHD6-209ENST00000482596 EPHX3Q9H6B9 360 aa9.11□□□□□ -0.95
CHD6-209ENST00000482596 KCNQ5Q9NR82 932 aa9.11□□□□□ -0.95
CHD6-209ENST00000482596 FZD1Q9UP38 647 aa9.11□□□□□ -0.95
CHD6-209ENST00000482596 PDE4AP27815 886 aa9.1□□□□□ -0.95
CHD6-209ENST00000482596 HOXA10P31260 410 aaPredicted RBP9.1□□□□□ -0.95
CHD6-209ENST00000482596 IL6STP40189 918 aaPredicted RBP9.1□□□□□ -0.95
CHD6-209ENST00000482596 DSG2Q14126 1118 aa9.1□□□□□ -0.95
CHD6-209ENST00000482596 PLEKHO1Q53GL0 409 aaPredicted RBP9.1□□□□□ -0.95
CHD6-209ENST00000482596 ARSIQ5FYB1 569 aa9.1□□□□□ -0.95
CHD6-209ENST00000482596 DZIP3Q86Y13 1208 aaKnown RBP9.1□□□□□ -0.95
CHD6-209ENST00000482596 VSIG10Q8N0Z9 540 aa9.1□□□□□ -0.95
CHD6-209ENST00000482596 CRISPLD2Q9H0B8 497 aa9.1□□□□□ -0.95
CHD6-209ENST00000482596 TTYH1Q9H313 450 aaPredicted RBP9.1□□□□□ -0.95
CHD6-209ENST00000482596 SLC52A2Q9HAB3 445 aa9.1□□□□□ -0.95
CHD6-209ENST00000482596 ZFHX4Q86UP3 3567 aa9.09□□□□□ -0.95
CHD6-209ENST00000482596 KRT37O76014 449 aa9.09□□□□□ -0.95
CHD6-209ENST00000482596 STARD3NLO95772 234 aa9.09□□□□□ -0.95
CHD6-209ENST00000482596 A1BGP04217 495 aa9.09□□□□□ -0.95
CHD6-209ENST00000482596 PIP4K2AP48426 406 aaPredicted RBP9.09□□□□□ -0.95
CHD6-209ENST00000482596 C1orf141Q5JVX7 400 aa9.09□□□□□ -0.95
CHD6-209ENST00000482596 DIS3LQ8TF46 1054 aaKnown RBP9.09□□□□□ -0.95
CHD6-209ENST00000482596 RPGRQ92834 1020 aaKnown RBP9.09□□□□□ -0.95
CHD6-209ENST00000482596 PAWRQ96IZ0 340 aaKnown RBP9.09□□□□□ -0.95
CHD6-209ENST00000482596 ASB2Q96Q27 587 aa9.09□□□□□ -0.95
CHD6-209ENST00000482596 LGR6Q9HBX8 967 aa9.09□□□□□ -0.95
CHD6-209ENST00000482596 NIP7Q9Y221 180 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHD6-209ENST00000482596 RTL9Q8NET4 1388 aa9.09□□□□□ -0.95
CHD6-209ENST00000482596 SCN9AQ15858 1988 aa9.08□□□□□ -0.96
CHD6-209ENST00000482596 DUOX1Q9NRD9 1551 aa9.08□□□□□ -0.96
CHD6-209ENST00000482596 SPTBN4Q9H254 2564 aa9.08□□□□□ -0.96
CHD6-209ENST00000482596 SGPL1O95470 568 aa9.08□□□□□ -0.96
CHD6-209ENST00000482596 TNNT2P45379 298 aaPredicted RBP9.08□□□□□ -0.96
CHD6-209ENST00000482596 LDLRAD1Q5T700 205 aa9.08□□□□□ -0.96
CHD6-209ENST00000482596 SUPT20HQ8NEM7 779 aa9.08□□□□□ -0.96
CHD6-209ENST00000482596 HS3ST6Q96QI5 342 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms