RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 DACT2Q5SW24 774 aa12.03□□□□□ -0.48
GTF3C2-210ENST00000480989 SULF1Q8IWU6 871 aa12.03□□□□□ -0.48
GTF3C2-210ENST00000480989 PI4KAP1Q8N8J0 262 aa12.03□□□□□ -0.48
GTF3C2-210ENST00000480989 MYOZ2Q9NPC6 264 aa12.03□□□□□ -0.48
GTF3C2-210ENST00000480989 MED23Q9ULK4 1368 aa12.03□□□□□ -0.48
GTF3C2-210ENST00000480989 USP17L8P0C7I0 530 aa12.02□□□□□ -0.49
GTF3C2-210ENST00000480989 CASP7P55210 303 aa12.02□□□□□ -0.49
GTF3C2-210ENST00000480989 KSR2Q6VAB6 950 aa12.02□□□□□ -0.49
GTF3C2-210ENST00000480989 ANKRD18AQ8IVF6 992 aa12.02□□□□□ -0.49
GTF3C2-210ENST00000480989 CCDC102AQ96A19 550 aa12.02□□□□□ -0.49
GTF3C2-210ENST00000480989 PITPNM2Q9BZ72 1349 aa12.02□□□□□ -0.49
GTF3C2-210ENST00000480989 IRS2Q9Y4H2 1338 aa12.02□□□□□ -0.49
GTF3C2-210ENST00000480989 LAMB1P07942 1786 aa12.02□□□□□ -0.49
GTF3C2-210ENST00000480989 USP17L3A6NCW0 530 aa12.01□□□□□ -0.49
GTF3C2-210ENST00000480989 USP17L4A6NCW7 530 aa12.01□□□□□ -0.49
GTF3C2-210ENST00000480989 NEURL1BA8MQ27 555 aa12.01□□□□□ -0.49
GTF3C2-210ENST00000480989 H7C1W4 665 aa12.01□□□□□ -0.49
GTF3C2-210ENST00000480989 SNAP23O00161 211 aa12.01□□□□□ -0.49
GTF3C2-210ENST00000480989 ATP2B4P23634 1241 aa12.01□□□□□ -0.49
GTF3C2-210ENST00000480989 SOX10P56693 466 aa12.01□□□□□ -0.49
GTF3C2-210ENST00000480989 USP17L1Q7RTZ2 530 aa12.01□□□□□ -0.49
GTF3C2-210ENST00000480989 PODNQ7Z5L7 613 aa12.01□□□□□ -0.49
GTF3C2-210ENST00000480989 BSDC1Q9NW68 430 aaPredicted RBP12.01□□□□□ -0.49
GTF3C2-210ENST00000480989 SSC5DA1L4H1 1573 aa12.01□□□□□ -0.49
GTF3C2-210ENST00000480989 MKI67P46013 3256 aaKnown RBP12□□□□□ -0.49
GTF3C2-210ENST00000480989 ECM29Q5VYK3 1845 aa12□□□□□ -0.49
GTF3C2-210ENST00000480989 UBE2Q2LH0YL09 131 aa12□□□□□ -0.49
GTF3C2-210ENST00000480989 WNT10BO00744 389 aa12□□□□□ -0.49
GTF3C2-210ENST00000480989 NPM3O75607 178 aaKnown RBP12□□□□□ -0.49
GTF3C2-210ENST00000480989 CCT4P50991 539 aaKnown RBP12□□□□□ -0.49
GTF3C2-210ENST00000480989 CCDC30Q5VVM6 783 aa12□□□□□ -0.49
GTF3C2-210ENST00000480989 ZBED3Q96IU2 234 aaPredicted RBP12□□□□□ -0.49
GTF3C2-210ENST00000480989 AOX1Q06278 1338 aa12□□□□□ -0.49
GTF3C2-210ENST00000480989 CENPFP49454 3210 aa12□□□□□ -0.49
GTF3C2-210ENST00000480989 SASH1O94885 1247 aa11.99□□□□□ -0.49
GTF3C2-210ENST00000480989 UBE3BQ7Z3V4 1068 aa11.99□□□□□ -0.49
GTF3C2-210ENST00000480989 R3HDMLQ9H3Y0 253 aa11.99□□□□□ -0.49
GTF3C2-210ENST00000480989 FZD1Q9UP38 647 aa11.99□□□□□ -0.49
GTF3C2-210ENST00000480989 PCDHAC2Q9Y5I4 1007 aa11.99□□□□□ -0.49
GTF3C2-210ENST00000480989 BRCA2P51587 3418 aa11.99□□□□□ -0.49
GTF3C2-210ENST00000480989 G3V3G9 751 aa11.98□□□□□ -0.49
GTF3C2-210ENST00000480989 DDX58O95786 925 aaKnown RBP11.98□□□□□ -0.49
GTF3C2-210ENST00000480989 DCAF8Q5TAQ9 597 aa11.98□□□□□ -0.49
GTF3C2-210ENST00000480989 CERS5Q8N5B7 392 aa11.98□□□□□ -0.49
GTF3C2-210ENST00000480989 CDC5LQ99459 802 aaKnown RBP11.98□□□□□ -0.49
GTF3C2-210ENST00000480989 PLA2G12BQ9BX93 195 aa11.98□□□□□ -0.49
GTF3C2-210ENST00000480989 CACNA1FO60840 1977 aa11.98□□□□□ -0.49
GTF3C2-210ENST00000480989 TBC1D8O95759 1140 aa11.97□□□□□ -0.49
GTF3C2-210ENST00000480989 CSF1RP07333 972 aa11.97□□□□□ -0.49
GTF3C2-210ENST00000480989 HSP90B1P14625 803 aaKnown RBP11.97□□□□□ -0.49
GTF3C2-210ENST00000480989 FKBP1BP68106 108 aa11.97□□□□□ -0.49
GTF3C2-210ENST00000480989 CALD1Q05682 793 aaKnown RBP11.97□□□□□ -0.49
GTF3C2-210ENST00000480989 GCKRQ14397 625 aa11.97□□□□□ -0.49
GTF3C2-210ENST00000480989 CTU1Q7Z7A3 348 aaKnown RBP11.97□□□□□ -0.49
GTF3C2-210ENST00000480989 WWC1Q8IX03 1113 aa11.97□□□□□ -0.49
GTF3C2-210ENST00000480989 OTOFQ9HC10 1997 aa11.97□□□□□ -0.49
GTF3C2-210ENST00000480989 ITGA6P23229 1130 aa11.96□□□□□ -0.49
GTF3C2-210ENST00000480989 PTPN12Q05209 780 aaKnown RBP11.96□□□□□ -0.49
GTF3C2-210ENST00000480989 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.49
GTF3C2-210ENST00000480989 TWISTNBQ3B726 338 aaPredicted RBP11.96□□□□□ -0.49
GTF3C2-210ENST00000480989 STRIP1Q5VSL9 837 aa11.96□□□□□ -0.49
GTF3C2-210ENST00000480989 ZNF296Q8WUU4 475 aaPredicted RBP11.96□□□□□ -0.49
GTF3C2-210ENST00000480989 COA1Q9GZY4 146 aa11.96□□□□□ -0.49
GTF3C2-210ENST00000480989 HPS5Q9UPZ3 1129 aa11.96□□□□□ -0.49
GTF3C2-210ENST00000480989 ZNF804BA4D1E1 1349 aa11.95□□□□□ -0.5
GTF3C2-210ENST00000480989 FANCIQ9NVI1 1328 aa11.95□□□□□ -0.5
GTF3C2-210ENST00000480989 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
GTF3C2-210ENST00000480989 TM4SF4P48230 202 aa11.95□□□□□ -0.5
GTF3C2-210ENST00000480989 CHRNDQ07001 517 aa11.95□□□□□ -0.5
GTF3C2-210ENST00000480989 FLIIQ13045 1269 aa11.95□□□□□ -0.5
GTF3C2-210ENST00000480989 CCDC27Q2M243 656 aa11.95□□□□□ -0.5
GTF3C2-210ENST00000480989 KIAA0825Q8IV33 1275 aa11.95□□□□□ -0.5
GTF3C2-210ENST00000480989 FBXW7Q969H0 707 aa11.95□□□□□ -0.5
GTF3C2-210ENST00000480989 LEMD3Q9Y2U8 911 aa11.95□□□□□ -0.5
GTF3C2-210ENST00000480989 ARAP2Q8WZ64 1704 aa11.94□□□□□ -0.5
GTF3C2-210ENST00000480989 GTF2IP78347 998 aa11.94□□□□□ -0.5
GTF3C2-210ENST00000480989 FOXO4P98177 505 aa11.94□□□□□ -0.5
GTF3C2-210ENST00000480989 PRKG1Q13976 671 aa11.94□□□□□ -0.5
GTF3C2-210ENST00000480989 EPHA10Q5JZY3 1008 aa11.94□□□□□ -0.5
GTF3C2-210ENST00000480989 LDLRAD1Q5T700 205 aa11.94□□□□□ -0.5
GTF3C2-210ENST00000480989 TTLL5Q6EMB2 1281 aa11.94□□□□□ -0.5
GTF3C2-210ENST00000480989 CD209Q9NNX6 404 aa11.94□□□□□ -0.5
GTF3C2-210ENST00000480989 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
GTF3C2-210ENST00000480989 MYO3BQ8WXR4 1341 aa11.93□□□□□ -0.5
GTF3C2-210ENST00000480989 VAMP4O75379 141 aa11.93□□□□□ -0.5
GTF3C2-210ENST00000480989 TAF5LO75529 589 aa11.93□□□□□ -0.5
GTF3C2-210ENST00000480989 IGHMBP2P38935 993 aaKnown RBP11.93□□□□□ -0.5
GTF3C2-210ENST00000480989 CAP1Q01518 475 aa11.93□□□□□ -0.5
GTF3C2-210ENST00000480989 HELBQ8NG08 1087 aaPredicted RBP11.93□□□□□ -0.5
GTF3C2-210ENST00000480989 DNAAF4Q8WXU2 420 aa11.93□□□□□ -0.5
GTF3C2-210ENST00000480989 F6X3S4 739 aa11.92□□□□□ -0.5
GTF3C2-210ENST00000480989 GPR25O00155 361 aa11.92□□□□□ -0.5
GTF3C2-210ENST00000480989 GJA5P36382 358 aa11.92□□□□□ -0.5
GTF3C2-210ENST00000480989 NEXNQ0ZGT2 675 aa11.92□□□□□ -0.5
GTF3C2-210ENST00000480989 REM2Q8IYK8 340 aaPredicted RBP11.92□□□□□ -0.5
GTF3C2-210ENST00000480989 CLMNQ96JQ2 1002 aa11.92□□□□□ -0.5
GTF3C2-210ENST00000480989 CFHR5Q9BXR6 569 aa11.92□□□□□ -0.5
GTF3C2-210ENST00000480989 STK31Q9BXU1 1019 aa11.92□□□□□ -0.5
GTF3C2-210ENST00000480989 JAG2Q9Y219 1238 aa11.92□□□□□ -0.5
GTF3C2-210ENST00000480989 IL16Q14005 1332 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms