RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 FLAD1Q8NFF5 587 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 KCNB2Q92953 911 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 BCL2L12Q9HB09 334 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 NARFQ9UHQ1 456 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 QSER1Q2KHR3 1735 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 ABCC12Q96J65 1359 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 MROH5Q6ZUA9 1318 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 PDE8BO95263 885 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 ZKSCAN1P17029 563 aaPredicted RBP17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 COL24A1Q17RW2 1714 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 ADCK5Q3MIX3 580 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 MCMDC2Q4G0Z9 681 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 COL23A1Q86Y22 540 aaPredicted RBP17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 TNPO1Q92973 898 aaKnown RBP17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 MPHOSPH8Q99549 860 aa17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 RTCBQ9Y3I0 505 aaKnown RBP17.47■□□□□ 0.39
PKNOX1-206ENST00000480179 RTL9Q8NET4 1388 aa17.46■□□□□ 0.39
PKNOX1-206ENST00000480179 SSFA2P28290 1259 aa17.46■□□□□ 0.39
PKNOX1-206ENST00000480179 PUM3Q15397 648 aaKnown RBP17.46■□□□□ 0.39
PKNOX1-206ENST00000480179 AMIGO3Q86WK7 504 aa17.46■□□□□ 0.39
PKNOX1-206ENST00000480179 COL4A1P02462 1669 aa17.46■□□□□ 0.39
PKNOX1-206ENST00000480179 ZPR1O75312 459 aa17.45■□□□□ 0.38
PKNOX1-206ENST00000480179 MCM4P33991 863 aa17.45■□□□□ 0.38
PKNOX1-206ENST00000480179 PI16Q6UXB8 463 aa17.45■□□□□ 0.38
PKNOX1-206ENST00000480179 C3orf67Q6ZVT6 689 aa17.45■□□□□ 0.38
PKNOX1-206ENST00000480179 TTC14Q96N46 770 aa17.45■□□□□ 0.38
PKNOX1-206ENST00000480179 MYH7P12883 1935 aa17.45■□□□□ 0.38
PKNOX1-206ENST00000480179 RNF113AO15541 343 aaKnown RBP17.44■□□□□ 0.38
PKNOX1-206ENST00000480179 PHF14O94880 888 aa17.44■□□□□ 0.38
PKNOX1-206ENST00000480179 IGHMBP2P38935 993 aaKnown RBP17.44■□□□□ 0.38
PKNOX1-206ENST00000480179 ZAP70P43403 619 aa17.44■□□□□ 0.38
PKNOX1-206ENST00000480179 AK2P54819 239 aa17.44■□□□□ 0.38
PKNOX1-206ENST00000480179 ZMYM1Q5SVZ6 1142 aa17.44■□□□□ 0.38
PKNOX1-206ENST00000480179 RNF20Q5VTR2 975 aa17.44■□□□□ 0.38
PKNOX1-206ENST00000480179 AKAP11Q9UKA4 1901 aa17.44■□□□□ 0.38
PKNOX1-206ENST00000480179 RGL2O15211 777 aa17.44■□□□□ 0.38
PKNOX1-206ENST00000480179 GTF2E1P29083 439 aaPredicted RBP17.44■□□□□ 0.38
PKNOX1-206ENST00000480179 CWC22Q9HCG8 908 aaKnown RBP17.44■□□□□ 0.38
PKNOX1-206ENST00000480179 HELLSQ9NRZ9 838 aa17.44■□□□□ 0.38
PKNOX1-206ENST00000480179 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
PKNOX1-206ENST00000480179 CHD4Q14839 1912 aa17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 MAST3O60307 1309 aa17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 RPAP1Q9BWH6 1393 aaPredicted RBP17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 SLC5A1P13866 664 aa17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 MCAMP43121 646 aa17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 PHKA1P46020 1223 aa17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 CUL4AQ13619 759 aa17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 IL27Q8NEV9 243 aa17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 LPIN2Q92539 896 aa17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 LARP6Q9BRS8 491 aaKnown RBP17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 TM6SF1Q9BZW5 370 aa17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 ZSWIM6Q9HCJ5 1215 aa17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 PDRG1Q9NUG6 133 aa17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 TAF6LQ9Y6J9 622 aa17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 TAF1P21675 1872 aa17.43■□□□□ 0.38
PKNOX1-206ENST00000480179 M0R2C6 588 aa17.42■□□□□ 0.38
PKNOX1-206ENST00000480179 GRIN3BO60391 1043 aa17.42■□□□□ 0.38
PKNOX1-206ENST00000480179 FGFR2P21802 821 aa17.42■□□□□ 0.38
PKNOX1-206ENST00000480179 MSL1Q68DK7 614 aa17.42■□□□□ 0.38
PKNOX1-206ENST00000480179 NLGN2Q8NFZ4 835 aa17.42■□□□□ 0.38
PKNOX1-206ENST00000480179 ARHGEF1Q92888 912 aaKnown RBP17.42■□□□□ 0.38
PKNOX1-206ENST00000480179 SETDB2Q96T68 719 aa17.42■□□□□ 0.38
PKNOX1-206ENST00000480179 HMG20BQ9P0W2 317 aa17.42■□□□□ 0.38
PKNOX1-206ENST00000480179 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
PKNOX1-206ENST00000480179 A0A1B0GUL6 1792 aa17.42■□□□□ 0.38
PKNOX1-206ENST00000480179 SNAP23O00161 211 aa17.41■□□□□ 0.38
PKNOX1-206ENST00000480179 DEKP35659 375 aaKnown RBP17.41■□□□□ 0.38
PKNOX1-206ENST00000480179 CCDC102BQ68D86 513 aa17.41■□□□□ 0.38
PKNOX1-206ENST00000480179 RUFY3Q7L099 469 aa17.41■□□□□ 0.38
PKNOX1-206ENST00000480179 NBPF5PQ86XG9 351 aaPredicted RBP17.41■□□□□ 0.38
PKNOX1-206ENST00000480179 TICAM2Q86XR7 235 aa17.41■□□□□ 0.38
PKNOX1-206ENST00000480179 CDC5LQ99459 802 aaKnown RBP17.41■□□□□ 0.38
PKNOX1-206ENST00000480179 NUCB2P80303 420 aa17.41■□□□□ 0.38
PKNOX1-206ENST00000480179 PKP1Q13835 747 aa17.41■□□□□ 0.38
PKNOX1-206ENST00000480179 LRRFIP1Q32MZ4 808 aaKnown RBP17.41■□□□□ 0.38
PKNOX1-206ENST00000480179 GBP4Q96PP9 640 aa17.41■□□□□ 0.38
PKNOX1-206ENST00000480179 NYXQ9GZU5 481 aa17.41■□□□□ 0.38
PKNOX1-206ENST00000480179 LIMCH1Q9UPQ0 1083 aa17.41■□□□□ 0.38
PKNOX1-206ENST00000480179 MYO5AQ9Y4I1 1855 aaKnown RBP17.4■□□□□ 0.38
PKNOX1-206ENST00000480179 PSMA5P28066 241 aa17.4■□□□□ 0.38
PKNOX1-206ENST00000480179 RFC4P35249 363 aa17.4■□□□□ 0.38
PKNOX1-206ENST00000480179 WASHC4Q2M389 1173 aa17.4■□□□□ 0.38
PKNOX1-206ENST00000480179 VPS53Q5VIR6 699 aa17.4■□□□□ 0.38
PKNOX1-206ENST00000480179 ZNF512BQ96KM6 892 aaPredicted RBP17.4■□□□□ 0.38
PKNOX1-206ENST00000480179 ZFYP08048 801 aaPredicted RBP17.39■□□□□ 0.37
PKNOX1-206ENST00000480179 UQCRFS1P1P0C7P4 283 aa17.39■□□□□ 0.37
PKNOX1-206ENST00000480179 ARID4AP29374 1257 aaPredicted RBP17.39■□□□□ 0.37
PKNOX1-206ENST00000480179 CHRNDQ07001 517 aa17.39■□□□□ 0.37
PKNOX1-206ENST00000480179 SF3B3Q15393 1217 aaKnown RBP17.39■□□□□ 0.37
PKNOX1-206ENST00000480179 CCDC24Q8N4L8 307 aa17.39■□□□□ 0.37
PKNOX1-206ENST00000480179 OSBP2Q969R2 916 aa17.39■□□□□ 0.37
PKNOX1-206ENST00000480179 UBR3Q6ZT12 1888 aa17.39■□□□□ 0.37
PKNOX1-206ENST00000480179 DDX11L8A8MPP1 907 aa17.38■□□□□ 0.37
PKNOX1-206ENST00000480179 C1QTNF8P60827 252 aa17.38■□□□□ 0.37
PKNOX1-206ENST00000480179 COL9A3Q14050 684 aaPredicted RBP17.38■□□□□ 0.37
PKNOX1-206ENST00000480179 TRAPPC3LQ5T215 181 aa17.38■□□□□ 0.37
PKNOX1-206ENST00000480179 BLOC1S2Q6QNY1 142 aa17.38■□□□□ 0.37
PKNOX1-206ENST00000480179 ANKRD18AQ8IVF6 992 aa17.38■□□□□ 0.37
PKNOX1-206ENST00000480179 INTS4Q96HW7 963 aaKnown RBP17.38■□□□□ 0.37
PKNOX1-206ENST00000480179 PIH1D3Q9NQM4 214 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms