RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 DCAF8Q5TAQ9 597 aa14.68□□□□□ -0.06
LSM2-212ENST00000477182 MOB2Q70IA6 237 aa14.68□□□□□ -0.06
LSM2-212ENST00000477182 STK31Q9BXU1 1019 aa14.68□□□□□ -0.06
LSM2-212ENST00000477182 ZC3H12CQ9C0D7 883 aaKnown RBP14.68□□□□□ -0.06
LSM2-212ENST00000477182 CHPF2Q9P2E5 772 aa14.68□□□□□ -0.06
LSM2-212ENST00000477182 POLLQ9UGP5 575 aa14.68□□□□□ -0.06
LSM2-212ENST00000477182 SZT2Q5T011 3432 aa14.67□□□□□ -0.06
LSM2-212ENST00000477182 SH3TC1Q8TE82 1336 aa14.67□□□□□ -0.06
LSM2-212ENST00000477182 TRIOBPQ9H2D6 2365 aa14.67□□□□□ -0.06
LSM2-212ENST00000477182 ANXA1P04083 346 aa14.67□□□□□ -0.06
LSM2-212ENST00000477182 EN2P19622 333 aaPredicted RBP14.67□□□□□ -0.06
LSM2-212ENST00000477182 INHBEP58166 350 aa14.67□□□□□ -0.06
LSM2-212ENST00000477182 PROSER3Q2NL68 480 aa14.67□□□□□ -0.06
LSM2-212ENST00000477182 MRPL50Q8N5N7 158 aaKnown RBP14.67□□□□□ -0.06
LSM2-212ENST00000477182 ARMC5Q96C12 935 aa14.67□□□□□ -0.06
LSM2-212ENST00000477182 TMEM106CQ9BVX2 250 aa14.67□□□□□ -0.06
LSM2-212ENST00000477182 CHMP4AQ9BY43 222 aa14.67□□□□□ -0.06
LSM2-212ENST00000477182 TRMT112Q9UI30 125 aaKnown RBP14.67□□□□□ -0.06
LSM2-212ENST00000477182 SCN9AQ15858 1988 aa14.66□□□□□ -0.06
LSM2-212ENST00000477182 SLC4A2P04920 1241 aa14.66□□□□□ -0.06
LSM2-212ENST00000477182 MKRN3Q13064 507 aaKnown RBP14.66□□□□□ -0.06
LSM2-212ENST00000477182 RSBN1LQ6PCB5 846 aaPredicted RBP14.66□□□□□ -0.06
LSM2-212ENST00000477182 NLRP10Q86W26 655 aa14.66□□□□□ -0.06
LSM2-212ENST00000477182 ERO1AQ96HE7 468 aa14.66□□□□□ -0.06
LSM2-212ENST00000477182 R3HDMLQ9H3Y0 253 aa14.66□□□□□ -0.06
LSM2-212ENST00000477182 MYOZ2Q9NPC6 264 aa14.66□□□□□ -0.06
LSM2-212ENST00000477182 DBF4Q9UBU7 674 aaPredicted RBP14.66□□□□□ -0.06
LSM2-212ENST00000477182 PTPN22Q9Y2R2 807 aa14.66□□□□□ -0.06
LSM2-212ENST00000477182 BRCA2P51587 3418 aa14.65□□□□□ -0.06
LSM2-212ENST00000477182 GPSM2P81274 684 aa14.65□□□□□ -0.06
LSM2-212ENST00000477182 PDIA6Q15084 440 aa14.65□□□□□ -0.06
LSM2-212ENST00000477182 ARMC9Q7Z3E5 817 aa14.65□□□□□ -0.06
LSM2-212ENST00000477182 CEP290O15078 2479 aa14.64□□□□□ -0.07
LSM2-212ENST00000477182 USP17L8P0C7I0 530 aa14.64□□□□□ -0.07
LSM2-212ENST00000477182 G2E3Q7L622 706 aa14.64□□□□□ -0.07
LSM2-212ENST00000477182 TBC1D16Q8TBP0 767 aa14.64□□□□□ -0.07
LSM2-212ENST00000477182 MANSC4A6NHS7 340 aaPredicted RBP14.63□□□□□ -0.07
LSM2-212ENST00000477182 CELF1Q92879 486 aaKnown RBP14.63□□□□□ -0.07
LSM2-212ENST00000477182 OTUD5Q96G74 571 aa14.63□□□□□ -0.07
LSM2-212ENST00000477182 PHAXQ9H814 394 aaKnown RBP14.63□□□□□ -0.07
LSM2-212ENST00000477182 SUPT16HQ9Y5B9 1047 aaKnown RBP14.63□□□□□ -0.07
LSM2-212ENST00000477182 PSME4Q14997 1843 aa14.63□□□□□ -0.07
LSM2-212ENST00000477182 H0YGN5 161 aa14.62□□□□□ -0.07
LSM2-212ENST00000477182 SF3B3Q15393 1217 aaKnown RBP14.62□□□□□ -0.07
LSM2-212ENST00000477182 SPRYD7Q5W111 196 aa14.62□□□□□ -0.07
LSM2-212ENST00000477182 LRP10Q7Z4F1 713 aa14.62□□□□□ -0.07
LSM2-212ENST00000477182 NBPF11Q86T75 865 aa14.62□□□□□ -0.07
LSM2-212ENST00000477182 IFNL1Q8IU54 200 aa14.62□□□□□ -0.07
LSM2-212ENST00000477182 FRAT1Q92837 279 aaPredicted RBP14.62□□□□□ -0.07
LSM2-212ENST00000477182 EFCC1Q9HA90 598 aa14.62□□□□□ -0.07
LSM2-212ENST00000477182 HYPKQ9NX55 129 aa14.62□□□□□ -0.07
LSM2-212ENST00000477182 PODXL2Q9NZ53 605 aa14.62□□□□□ -0.07
LSM2-212ENST00000477182 NOB1Q9ULX3 412 aaKnown RBP14.62□□□□□ -0.07
LSM2-212ENST00000477182 KIF16BQ96L93 1317 aa14.62□□□□□ -0.07
LSM2-212ENST00000477182 PLIN1O60240 522 aa14.61□□□□□ -0.07
LSM2-212ENST00000477182 PTPN12Q05209 780 aaKnown RBP14.61□□□□□ -0.07
LSM2-212ENST00000477182 FLIIQ13045 1269 aa14.61□□□□□ -0.07
LSM2-212ENST00000477182 PRAMEF18Q5VWM3 479 aa14.61□□□□□ -0.07
LSM2-212ENST00000477182 GMLQ99445 158 aa14.61□□□□□ -0.07
LSM2-212ENST00000477182 AIMP1Q12904 312 aaKnown RBP14.6□□□□□ -0.07
LSM2-212ENST00000477182 OTUD7BQ6GQQ9 843 aa14.6□□□□□ -0.07
LSM2-212ENST00000477182 XAGE3Q8WTP9 111 aa14.6□□□□□ -0.07
LSM2-212ENST00000477182 SCAF8Q9UPN6 1271 aaKnown RBP14.6□□□□□ -0.07
LSM2-212ENST00000477182 A0A0C4DFX4 3053 aa14.59□□□□□ -0.07
LSM2-212ENST00000477182 UFL1O94874 794 aa14.59□□□□□ -0.07
LSM2-212ENST00000477182 ZBTB48P10074 688 aaPredicted RBP14.59□□□□□ -0.07
LSM2-212ENST00000477182 RRP1P56182 461 aaKnown RBP14.59□□□□□ -0.07
LSM2-212ENST00000477182 RPS8P62241 208 aaKnown RBP14.59□□□□□ -0.07
LSM2-212ENST00000477182 FKBP5Q13451 457 aaPredicted RBP14.59□□□□□ -0.07
LSM2-212ENST00000477182 ARHGEF6Q15052 776 aa14.59□□□□□ -0.07
LSM2-212ENST00000477182 LDLRAD1Q5T700 205 aa14.59□□□□□ -0.07
LSM2-212ENST00000477182 CHRDL2Q6WN34 429 aa14.59□□□□□ -0.07
LSM2-212ENST00000477182 COPS6Q7L5N1 327 aa14.59□□□□□ -0.07
LSM2-212ENST00000477182 OGFOD1Q8N543 542 aa14.59□□□□□ -0.07
LSM2-212ENST00000477182 CD99L2Q8TCZ2 262 aa14.59□□□□□ -0.07
LSM2-212ENST00000477182 ZNF333Q96JL9 665 aa14.59□□□□□ -0.07
LSM2-212ENST00000477182 ANKIB1Q9P2G1 1089 aa14.59□□□□□ -0.07
LSM2-212ENST00000477182 GGA1Q9UJY5 639 aa14.59□□□□□ -0.07
LSM2-212ENST00000477182 USP17L3A6NCW0 530 aa14.58□□□□□ -0.08
LSM2-212ENST00000477182 USP17L4A6NCW7 530 aa14.58□□□□□ -0.08
LSM2-212ENST00000477182 IPO8O15397 1037 aaKnown RBP14.58□□□□□ -0.08
LSM2-212ENST00000477182 MMP14P50281 582 aa14.58□□□□□ -0.08
LSM2-212ENST00000477182 SLC4A8Q2Y0W8 1093 aa14.58□□□□□ -0.08
LSM2-212ENST00000477182 NBPF9Q3BBW0 867 aa14.58□□□□□ -0.08
LSM2-212ENST00000477182 ZKSCAN2Q63HK3 967 aa14.58□□□□□ -0.08
LSM2-212ENST00000477182 USP17L1Q7RTZ2 530 aa14.58□□□□□ -0.08
LSM2-212ENST00000477182 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.58□□□□□ -0.08
LSM2-212ENST00000477182 SLC10A4Q96EP9 437 aa14.58□□□□□ -0.08
LSM2-212ENST00000477182 TNNQ9UQP3 1299 aa14.58□□□□□ -0.08
LSM2-212ENST00000477182 PTPRCP08575 1304 aa14.58□□□□□ -0.08
LSM2-212ENST00000477182 LAMB1P07942 1786 aa14.57□□□□□ -0.08
LSM2-212ENST00000477182 CUL9Q8IWT3 2517 aa14.57□□□□□ -0.08
LSM2-212ENST00000477182 MNX1P50219 401 aaPredicted RBP14.57□□□□□ -0.08
LSM2-212ENST00000477182 SP3Q02447 781 aa14.57□□□□□ -0.08
LSM2-212ENST00000477182 SLC9C1Q4G0N8 1177 aa14.57□□□□□ -0.08
LSM2-212ENST00000477182 ATF7IPQ6VMQ6 1270 aa14.57□□□□□ -0.08
LSM2-212ENST00000477182 PODNQ7Z5L7 613 aa14.57□□□□□ -0.08
LSM2-212ENST00000477182 ANGEL1Q9UNK9 670 aaKnown RBP14.57□□□□□ -0.08
LSM2-212ENST00000477182 F6X3S4 739 aa14.56□□□□□ -0.08
LSM2-212ENST00000477182 WNT10BO00744 389 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms