RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 TXNRD3Q86VQ6 643 aa15.39■□□□□ 0.05
DDX56-209ENST00000473924 CRBNQ96SW2 442 aa15.39■□□□□ 0.05
DDX56-209ENST00000473924 TNIP1Q15025 636 aa15.38■□□□□ 0.05
DDX56-209ENST00000473924 PUM3Q15397 648 aaKnown RBP15.38■□□□□ 0.05
DDX56-209ENST00000473924 ZNF804AQ7Z570 1209 aa15.38■□□□□ 0.05
DDX56-209ENST00000473924 GPC2Q8N158 579 aa15.38■□□□□ 0.05
DDX56-209ENST00000473924 VGLL2Q8N8G2 317 aa15.38■□□□□ 0.05
DDX56-209ENST00000473924 COA1Q9GZY4 146 aa15.38■□□□□ 0.05
DDX56-209ENST00000473924 YDJCA8MPS7 323 aa15.37■□□□□ 0.05
DDX56-209ENST00000473924 IFIT1P09914 478 aaKnown RBP15.37■□□□□ 0.05
DDX56-209ENST00000473924 SLC5A1P13866 664 aa15.37■□□□□ 0.05
DDX56-209ENST00000473924 CXCL9Q07325 125 aa15.37■□□□□ 0.05
DDX56-209ENST00000473924 C15orf52Q6ZUT6 534 aaKnown RBP15.37■□□□□ 0.05
DDX56-209ENST00000473924 PODNQ7Z5L7 613 aa15.37■□□□□ 0.05
DDX56-209ENST00000473924 VPS37DQ86XT2 251 aa15.37■□□□□ 0.05
DDX56-209ENST00000473924 TFCP2Q12800 502 aa15.36■□□□□ 0.05
DDX56-209ENST00000473924 ATP2B3Q16720 1220 aa15.36■□□□□ 0.05
DDX56-209ENST00000473924 CAVIN4Q5BKX8 364 aa15.36■□□□□ 0.05
DDX56-209ENST00000473924 LPIN2Q92539 896 aa15.36■□□□□ 0.05
DDX56-209ENST00000473924 FBXW7Q969H0 707 aa15.36■□□□□ 0.05
DDX56-209ENST00000473924 RRAGCQ9HB90 399 aa15.36■□□□□ 0.05
DDX56-209ENST00000473924 GYG1P46976 350 aa15.35■□□□□ 0.05
DDX56-209ENST00000473924 NMRK2Q9NPI5 230 aa15.35■□□□□ 0.05
DDX56-209ENST00000473924 KCNQ5Q9NR82 932 aa15.35■□□□□ 0.05
DDX56-209ENST00000473924 AKAP2Q9Y2D5 859 aa15.35■□□□□ 0.05
DDX56-209ENST00000473924 USP17L3A6NCW0 530 aa15.34■□□□□ 0.05
DDX56-209ENST00000473924 USP17L4A6NCW7 530 aa15.34■□□□□ 0.05
DDX56-209ENST00000473924 PSMD14O00487 310 aa15.34■□□□□ 0.05
DDX56-209ENST00000473924 VEGFAP15692 232 aaPredicted RBP15.34■□□□□ 0.05
DDX56-209ENST00000473924 FGFR2P21802 821 aa15.34■□□□□ 0.05
DDX56-209ENST00000473924 LMOD1P29536 600 aaPredicted RBP15.34■□□□□ 0.05
DDX56-209ENST00000473924 HIBADHP31937 336 aaKnown RBP15.34■□□□□ 0.05
DDX56-209ENST00000473924 HSP90AB4PQ58FF6 505 aa15.34■□□□□ 0.05
DDX56-209ENST00000473924 USP17L1Q7RTZ2 530 aa15.34■□□□□ 0.05
DDX56-209ENST00000473924 SIRT2Q8IXJ6 389 aa15.34■□□□□ 0.05
DDX56-209ENST00000473924 CD209Q9NNX6 404 aa15.34■□□□□ 0.05
DDX56-209ENST00000473924 EXOC6BQ9Y2D4 811 aa15.34■□□□□ 0.05
DDX56-209ENST00000473924 NOP58Q9Y2X3 529 aaKnown RBP15.34■□□□□ 0.05
DDX56-209ENST00000473924 IRS2Q9Y4H2 1338 aa15.34■□□□□ 0.05
DDX56-209ENST00000473924 IQCA1LA6NCM1 817 aa15.33■□□□□ 0.04
DDX56-209ENST00000473924 FRAT2O75474 233 aaPredicted RBP15.33■□□□□ 0.04
DDX56-209ENST00000473924 ERC1Q8IUD2 1116 aa15.33■□□□□ 0.04
DDX56-209ENST00000473924 C16orf71Q8IYS4 520 aaPredicted RBP15.33■□□□□ 0.04
DDX56-209ENST00000473924 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.04
DDX56-209ENST00000473924 FAM84BQ96KN1 310 aaPredicted RBP15.33■□□□□ 0.04
DDX56-209ENST00000473924 WDR90Q96KV7 1748 aa15.32■□□□□ 0.04
DDX56-209ENST00000473924 A0A1B0GUL7 405 aa15.32■□□□□ 0.04
DDX56-209ENST00000473924 SASH1O94885 1247 aa15.32■□□□□ 0.04
DDX56-209ENST00000473924 IL1R1P14778 569 aa15.32■□□□□ 0.04
DDX56-209ENST00000473924 GMPSP49915 693 aaPredicted RBP15.32■□□□□ 0.04
DDX56-209ENST00000473924 TTLL5Q6EMB2 1281 aa15.32■□□□□ 0.04
DDX56-209ENST00000473924 NEUROD6Q96NK8 337 aa15.32■□□□□ 0.04
DDX56-209ENST00000473924 HACL1Q9UJ83 578 aa15.32■□□□□ 0.04
DDX56-209ENST00000473924 ZBTB12Q9Y330 459 aaPredicted RBP15.32■□□□□ 0.04
DDX56-209ENST00000473924 SCN9AQ15858 1988 aa15.31■□□□□ 0.04
DDX56-209ENST00000473924 APBB1O00213 710 aa15.31■□□□□ 0.04
DDX56-209ENST00000473924 VIL1P09327 827 aaKnown RBP15.31■□□□□ 0.04
DDX56-209ENST00000473924 BCAMP50895 628 aa15.31■□□□□ 0.04
DDX56-209ENST00000473924 TIMM10P62072 90 aa15.31■□□□□ 0.04
DDX56-209ENST00000473924 GTF2IP78347 998 aa15.31■□□□□ 0.04
DDX56-209ENST00000473924 IRX6P78412 446 aaPredicted RBP15.31■□□□□ 0.04
DDX56-209ENST00000473924 AAMPQ13685 434 aa15.31■□□□□ 0.04
DDX56-209ENST00000473924 STRIP1Q5VSL9 837 aa15.31■□□□□ 0.04
DDX56-209ENST00000473924 RSBN1LQ6PCB5 846 aaPredicted RBP15.31■□□□□ 0.04
DDX56-209ENST00000473924 FBXO33Q7Z6M2 555 aa15.31■□□□□ 0.04
DDX56-209ENST00000473924 EXOC6Q8TAG9 804 aa15.31■□□□□ 0.04
DDX56-209ENST00000473924 CENPBP07199 599 aaPredicted RBP15.3■□□□□ 0.04
DDX56-209ENST00000473924 RPS12P25398 132 aaKnown RBP15.3■□□□□ 0.04
DDX56-209ENST00000473924 SCNN1DP51172 638 aa15.3■□□□□ 0.04
DDX56-209ENST00000473924 GORABQ5T7V8 394 aa15.3■□□□□ 0.04
DDX56-209ENST00000473924 TDRD7Q8NHU6 1098 aaKnown RBP15.3■□□□□ 0.04
DDX56-209ENST00000473924 GNL3LQ9NVN8 582 aaKnown RBP15.3■□□□□ 0.04
DDX56-209ENST00000473924 IQSEC3Q9UPP2 1182 aaPredicted RBP15.3■□□□□ 0.04
DDX56-209ENST00000473924 PCDHB15Q9Y5E8 787 aa15.3■□□□□ 0.04
DDX56-209ENST00000473924 SCN4AP35499 1836 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 POTECB2RU33 542 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 KIF3CO14782 793 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 RAB11FIP3O75154 756 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 ADORA1P30542 326 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 EPHX2P34913 555 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 TNNI3KQ59H18 835 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 DACT2Q5SW24 774 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 AGBL3Q8NEM8 1001 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 DPF2Q92785 391 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 KIF1BPQ96EK5 621 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 XAGE2Q96GT9 111 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 BCL11AQ9H165 835 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 GPR108Q9NPR9 543 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 GPRC5DQ9NZD1 345 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 CNOT7Q9UIV1 285 aaKnown RBP15.29■□□□□ 0.04
DDX56-209ENST00000473924 JAG2Q9Y219 1238 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.29■□□□□ 0.04
DDX56-209ENST00000473924 FPGT-TNNI3KV9GXZ4 949 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 PSME4Q14997 1843 aa15.29■□□□□ 0.04
DDX56-209ENST00000473924 ZNF609O15014 1411 aa15.28■□□□□ 0.04
DDX56-209ENST00000473924 MYO3BQ8WXR4 1341 aa15.28■□□□□ 0.04
DDX56-209ENST00000473924 H7C1D1 291 aa15.28■□□□□ 0.04
DDX56-209ENST00000473924 EPS15P42566 896 aa15.28■□□□□ 0.04
DDX56-209ENST00000473924 CHAF1AQ13111 956 aaPredicted RBP15.28■□□□□ 0.04
DDX56-209ENST00000473924 EAPPQ56P03 285 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms