RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 AGBL3Q8NEM8 1001 aa14.42□□□□□ -0.1
ACTB-209ENST00000473257 SALL2Q9Y467 1007 aaPredicted RBP14.42□□□□□ -0.1
ACTB-209ENST00000473257 SASH1O94885 1247 aa14.41□□□□□ -0.1
ACTB-209ENST00000473257 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
ACTB-209ENST00000473257 HSP90B1P14625 803 aaKnown RBP14.41□□□□□ -0.1
ACTB-209ENST00000473257 MKRN3Q13064 507 aaKnown RBP14.41□□□□□ -0.1
ACTB-209ENST00000473257 DACT2Q5SW24 774 aa14.41□□□□□ -0.1
ACTB-209ENST00000473257 CCDC102AQ96A19 550 aa14.41□□□□□ -0.1
ACTB-209ENST00000473257 CDC5LQ99459 802 aaKnown RBP14.41□□□□□ -0.1
ACTB-209ENST00000473257 PSME4Q14997 1843 aa14.41□□□□□ -0.1
ACTB-209ENST00000473257 CCT4P50991 539 aaKnown RBP14.4□□□□□ -0.1
ACTB-209ENST00000473257 SOX10P56693 466 aa14.4□□□□□ -0.1
ACTB-209ENST00000473257 PRKG1Q13976 671 aa14.4□□□□□ -0.1
ACTB-209ENST00000473257 TWISTNBQ3B726 338 aaPredicted RBP14.4□□□□□ -0.1
ACTB-209ENST00000473257 BSDC1Q9NW68 430 aaPredicted RBP14.4□□□□□ -0.1
ACTB-209ENST00000473257 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.4□□□□□ -0.1
ACTB-209ENST00000473257 FZD1Q9UP38 647 aa14.4□□□□□ -0.1
ACTB-209ENST00000473257 ZNF646O15015 1829 aaPredicted RBP14.39□□□□□ -0.11
ACTB-209ENST00000473257 H7C1W4 665 aa14.39□□□□□ -0.11
ACTB-209ENST00000473257 RGS19P49795 217 aa14.39□□□□□ -0.11
ACTB-209ENST00000473257 WWC1Q8IX03 1113 aa14.39□□□□□ -0.11
ACTB-209ENST00000473257 STK31Q9BXU1 1019 aa14.39□□□□□ -0.11
ACTB-209ENST00000473257 MED23Q9ULK4 1368 aa14.38□□□□□ -0.11
ACTB-209ENST00000473257 ITGA6P23229 1130 aa14.38□□□□□ -0.11
ACTB-209ENST00000473257 NEXNQ0ZGT2 675 aa14.38□□□□□ -0.11
ACTB-209ENST00000473257 TTLL12Q14166 644 aaPredicted RBP14.38□□□□□ -0.11
ACTB-209ENST00000473257 GCKRQ14397 625 aa14.38□□□□□ -0.11
ACTB-209ENST00000473257 PODNQ7Z5L7 613 aa14.38□□□□□ -0.11
ACTB-209ENST00000473257 HELBQ8NG08 1087 aaPredicted RBP14.38□□□□□ -0.11
ACTB-209ENST00000473257 PCDHAC2Q9Y5I4 1007 aa14.38□□□□□ -0.11
ACTB-209ENST00000473257 MYH3P11055 1940 aa14.38□□□□□ -0.11
ACTB-209ENST00000473257 PDE4DIPQ5VU43 2346 aa14.38□□□□□ -0.11
ACTB-209ENST00000473257 ZNF609O15014 1411 aa14.38□□□□□ -0.11
ACTB-209ENST00000473257 WNT10BO00744 389 aa14.37□□□□□ -0.11
ACTB-209ENST00000473257 TBC1D8O95759 1140 aa14.37□□□□□ -0.11
ACTB-209ENST00000473257 CASP7P55210 303 aa14.37□□□□□ -0.11
ACTB-209ENST00000473257 KIAA0825Q8IV33 1275 aa14.37□□□□□ -0.11
ACTB-209ENST00000473257 SAGE1Q9NXZ1 904 aa14.37□□□□□ -0.11
ACTB-209ENST00000473257 JAG2Q9Y219 1238 aa14.37□□□□□ -0.11
ACTB-209ENST00000473257 AKAP11Q9UKA4 1901 aa14.37□□□□□ -0.11
ACTB-209ENST00000473257 F6X3S4 739 aa14.36□□□□□ -0.11
ACTB-209ENST00000473257 TAF5LO75529 589 aa14.36□□□□□ -0.11
ACTB-209ENST00000473257 IGHMBP2P38935 993 aaKnown RBP14.36□□□□□ -0.11
ACTB-209ENST00000473257 GTF2IP78347 998 aa14.36□□□□□ -0.11
ACTB-209ENST00000473257 FLIIQ13045 1269 aa14.36□□□□□ -0.11
ACTB-209ENST00000473257 PAPPA2Q9BXP8 1791 aa14.36□□□□□ -0.11
ACTB-209ENST00000473257 ZNF804BA4D1E1 1349 aa14.36□□□□□ -0.11
ACTB-209ENST00000473257 AOX1Q06278 1338 aa14.36□□□□□ -0.11
ACTB-209ENST00000473257 FANCIQ9NVI1 1328 aa14.36□□□□□ -0.11
ACTB-209ENST00000473257 FKBP5Q13451 457 aaPredicted RBP14.35□□□□□ -0.11
ACTB-209ENST00000473257 STRIP1Q5VSL9 837 aa14.35□□□□□ -0.11
ACTB-209ENST00000473257 TTLL5Q6EMB2 1281 aa14.35□□□□□ -0.11
ACTB-209ENST00000473257 CERS5Q8N5B7 392 aa14.35□□□□□ -0.11
ACTB-209ENST00000473257 COA1Q9GZY4 146 aa14.35□□□□□ -0.11
ACTB-209ENST00000473257 R3HDMLQ9H3Y0 253 aa14.35□□□□□ -0.11
ACTB-209ENST00000473257 PITPNM2Q9BZ72 1349 aa14.35□□□□□ -0.11
ACTB-209ENST00000473257 PTPN12Q05209 780 aaKnown RBP14.34□□□□□ -0.11
ACTB-209ENST00000473257 CHRNDQ07001 517 aa14.34□□□□□ -0.11
ACTB-209ENST00000473257 OGFOD1Q8N543 542 aa14.34□□□□□ -0.11
ACTB-209ENST00000473257 DNAAF4Q8WXU2 420 aa14.34□□□□□ -0.11
ACTB-209ENST00000473257 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
ACTB-209ENST00000473257 F8W031 263 aaPredicted RBP14.33□□□□□ -0.12
ACTB-209ENST00000473257 CSF1RP07333 972 aa14.33□□□□□ -0.12
ACTB-209ENST00000473257 KCNJ4P48050 445 aa14.33□□□□□ -0.12
ACTB-209ENST00000473257 EXOSC9Q06265 439 aaKnown RBP14.33□□□□□ -0.12
ACTB-209ENST00000473257 EPHA10Q5JZY3 1008 aa14.33□□□□□ -0.12
ACTB-209ENST00000473257 CTU1Q7Z7A3 348 aaKnown RBP14.33□□□□□ -0.12
ACTB-209ENST00000473257 ZNF594Q96JF6 807 aaPredicted RBP14.33□□□□□ -0.12
ACTB-209ENST00000473257 MPHOSPH8Q99549 860 aa14.33□□□□□ -0.12
ACTB-209ENST00000473257 LEMD3Q9Y2U8 911 aa14.33□□□□□ -0.12
ACTB-209ENST00000473257 CHMP3Q9Y3E7 222 aa14.33□□□□□ -0.12
ACTB-209ENST00000473257 HTTP42858 3142 aa14.32□□□□□ -0.12
ACTB-209ENST00000473257 VAMP4O75379 141 aa14.32□□□□□ -0.12
ACTB-209ENST00000473257 FKBP1BP68106 108 aa14.32□□□□□ -0.12
ACTB-209ENST00000473257 FOXO4P98177 505 aa14.32□□□□□ -0.12
ACTB-209ENST00000473257 CCDC27Q2M243 656 aa14.32□□□□□ -0.12
ACTB-209ENST00000473257 ZNF296Q8WUU4 475 aaPredicted RBP14.32□□□□□ -0.12
ACTB-209ENST00000473257 PLA2G12BQ9BX93 195 aa14.32□□□□□ -0.12
ACTB-209ENST00000473257 CD209Q9NNX6 404 aa14.32□□□□□ -0.12
ACTB-209ENST00000473257 IRS2Q9Y4H2 1338 aa14.32□□□□□ -0.12
ACTB-209ENST00000473257 CLRN2A0PK11 232 aa14.31□□□□□ -0.12
ACTB-209ENST00000473257 PLIN1O60240 522 aa14.31□□□□□ -0.12
ACTB-209ENST00000473257 SLC34A2O95436 690 aa14.31□□□□□ -0.12
ACTB-209ENST00000473257 LINS1Q8NG48 757 aa14.31□□□□□ -0.12
ACTB-209ENST00000473257 ZBED3Q96IU2 234 aaPredicted RBP14.31□□□□□ -0.12
ACTB-209ENST00000473257 CLMNQ96JQ2 1002 aa14.31□□□□□ -0.12
ACTB-209ENST00000473257 CHMP4AQ9BY43 222 aa14.31□□□□□ -0.12
ACTB-209ENST00000473257 ANKRD2Q9GZV1 360 aa14.31□□□□□ -0.12
ACTB-209ENST00000473257 MRS2Q9HD23 443 aa14.31□□□□□ -0.12
ACTB-209ENST00000473257 HPS5Q9UPZ3 1129 aa14.31□□□□□ -0.12
ACTB-209ENST00000473257 ANKRD18BA2A2Z9 1011 aa14.3□□□□□ -0.12
ACTB-209ENST00000473257 MYH16Q9H6N6 1097 aa14.3□□□□□ -0.12
ACTB-209ENST00000473257 ANGEL1Q9UNK9 670 aaKnown RBP14.3□□□□□ -0.12
ACTB-209ENST00000473257 IL16Q14005 1332 aa14.3□□□□□ -0.12
ACTB-209ENST00000473257 BEND3Q5T5X7 828 aa14.29□□□□□ -0.12
ACTB-209ENST00000473257 LMBR1LQ6UX01 489 aa14.29□□□□□ -0.12
ACTB-209ENST00000473257 HDAC9Q9UKV0 1011 aa14.29□□□□□ -0.12
ACTB-209ENST00000473257 MYO3BQ8WXR4 1341 aa14.29□□□□□ -0.12
ACTB-209ENST00000473257 SSC5DA1L4H1 1573 aa14.29□□□□□ -0.12
ACTB-209ENST00000473257 CENPFP49454 3210 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms