RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 SALL4Q9UJQ4 1053 aa9.55□□□□□ -0.88
CD46-213ENST00000471987 USP5P45974 858 aa9.54□□□□□ -0.88
CD46-213ENST00000471987 TXNDC11Q6PKC3 985 aa9.54□□□□□ -0.88
CD46-213ENST00000471987 POP1Q99575 1024 aaKnown RBP9.54□□□□□ -0.88
CD46-213ENST00000471987 POLIQ9UNA4 740 aa9.54□□□□□ -0.88
CD46-213ENST00000471987 SCO2A0A1W2PP80 73 aa9.53□□□□□ -0.88
CD46-213ENST00000471987 A6NHS1 94 aa9.53□□□□□ -0.88
CD46-213ENST00000471987 ALX3O95076 343 aa9.53□□□□□ -0.88
CD46-213ENST00000471987 CD68P34810 354 aaPredicted RBP9.53□□□□□ -0.88
CD46-213ENST00000471987 FKBP4Q02790 459 aaKnown RBP eCLIP9.53□□□□□ -0.88
CD46-213ENST00000471987 EHHADHQ08426 723 aa9.53□□□□□ -0.88
CD46-213ENST00000471987 FOXD4L6Q3SYB3 417 aaPredicted RBP9.53□□□□□ -0.88
CD46-213ENST00000471987 FOXD4L3Q6VB84 417 aaPredicted RBP9.53□□□□□ -0.88
CD46-213ENST00000471987 KLHL23Q8NBE8 558 aa9.53□□□□□ -0.88
CD46-213ENST00000471987 GALNT11Q8NCW6 608 aa9.53□□□□□ -0.88
CD46-213ENST00000471987 ADAM19Q9H013 955 aa9.53□□□□□ -0.88
CD46-213ENST00000471987 USTQ9Y2C2 406 aa9.53□□□□□ -0.88
CD46-213ENST00000471987 CARNS1A5YM72 827 aa9.52□□□□□ -0.89
CD46-213ENST00000471987 FSCN2O14926 492 aa9.52□□□□□ -0.89
CD46-213ENST00000471987 CDC25BP30305 580 aa9.52□□□□□ -0.89
CD46-213ENST00000471987 B4GALNT3Q6L9W6 998 aa9.52□□□□□ -0.89
CD46-213ENST00000471987 ADAMTSL4Q6UY14 1074 aa9.52□□□□□ -0.89
CD46-213ENST00000471987 Q6ZS46 218 aa9.52□□□□□ -0.89
CD46-213ENST00000471987 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.52□□□□□ -0.89
CD46-213ENST00000471987 SH2B1Q9NRF2 756 aaPredicted RBP9.52□□□□□ -0.89
CD46-213ENST00000471987 ABL1P00519 1130 aa9.51□□□□□ -0.89
CD46-213ENST00000471987 EPHA1P21709 976 aa9.51□□□□□ -0.89
CD46-213ENST00000471987 CABP4P57796 275 aa9.51□□□□□ -0.89
CD46-213ENST00000471987 PRR23CQ6ZRP0 262 aa9.51□□□□□ -0.89
CD46-213ENST00000471987 DZANK1Q9NVP4 752 aa9.51□□□□□ -0.89
CD46-213ENST00000471987 PDE2AO00408 941 aaPredicted RBP9.5□□□□□ -0.89
CD46-213ENST00000471987 GLB1P16278 677 aa9.5□□□□□ -0.89
CD46-213ENST00000471987 AGGF1Q8N302 714 aaeCLIP9.5□□□□□ -0.89
CD46-213ENST00000471987 SNX29Q8TEQ0 813 aa9.5□□□□□ -0.89
CD46-213ENST00000471987 CARD10Q9BWT7 1032 aa9.5□□□□□ -0.89
CD46-213ENST00000471987 CHRDQ9H2X0 955 aa9.5□□□□□ -0.89
CD46-213ENST00000471987 SEC31BQ9NQW1 1179 aa9.5□□□□□ -0.89
CD46-213ENST00000471987 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.5□□□□□ -0.89
CD46-213ENST00000471987 H3BRJ5 948 aa9.49□□□□□ -0.89
CD46-213ENST00000471987 NFKBIEO00221 500 aa9.49□□□□□ -0.89
CD46-213ENST00000471987 PHACTR2O75167 634 aa9.49□□□□□ -0.89
CD46-213ENST00000471987 TNFRSF21O75509 655 aa9.49□□□□□ -0.89
CD46-213ENST00000471987 WNT8BQ93098 351 aa9.49□□□□□ -0.89
CD46-213ENST00000471987 TM4SF5O14894 197 aa9.48□□□□□ -0.89
CD46-213ENST00000471987 FZD6O60353 706 aa9.48□□□□□ -0.89
CD46-213ENST00000471987 EDN3P14138 238 aa9.48□□□□□ -0.89
CD46-213ENST00000471987 ACPPP15309 386 aa9.48□□□□□ -0.89
CD46-213ENST00000471987 PIP4K2BP78356 416 aa9.48□□□□□ -0.89
CD46-213ENST00000471987 ACAD11Q709F0 780 aa9.48□□□□□ -0.89
CD46-213ENST00000471987 ERICH6Q7L0X2 663 aa9.48□□□□□ -0.89
CD46-213ENST00000471987 CEP41Q9BYV8 373 aa9.48□□□□□ -0.89
CD46-213ENST00000471987 ANO2Q9NQ90 1003 aa9.48□□□□□ -0.89
CD46-213ENST00000471987 KCNK4Q9NYG8 393 aa9.48□□□□□ -0.89
CD46-213ENST00000471987 WISP1O95388 367 aa9.47□□□□□ -0.89
CD46-213ENST00000471987 ZNF211Q13398 564 aaPredicted RBP9.47□□□□□ -0.89
CD46-213ENST00000471987 ARTNQ5T4W7 220 aa9.47□□□□□ -0.89
CD46-213ENST00000471987 TMEM102Q8N9M5 508 aaPredicted RBP9.47□□□□□ -0.89
CD46-213ENST00000471987 EGFL7Q9UHF1 273 aa9.47□□□□□ -0.89
CD46-213ENST00000471987 EREGO14944 169 aa9.46□□□□□ -0.9
CD46-213ENST00000471987 DUOXA2Q1HG44 320 aa9.46□□□□□ -0.9
CD46-213ENST00000471987 SLC51AQ86UW1 340 aa9.46□□□□□ -0.9
CD46-213ENST00000471987 KLHDC7BQ96G42 594 aa9.46□□□□□ -0.9
CD46-213ENST00000471987 OSMRQ99650 979 aa9.46□□□□□ -0.9
CD46-213ENST00000471987 ZFP64Q9NPA5 681 aa9.46□□□□□ -0.9
CD46-213ENST00000471987 OSGEPQ9NPF4 335 aa9.46□□□□□ -0.9
CD46-213ENST00000471987 TRPA1O75762 1119 aa9.45□□□□□ -0.9
CD46-213ENST00000471987 GJD3Q8N144 294 aa9.45□□□□□ -0.9
CD46-213ENST00000471987 CCDC87Q9NVE4 849 aa9.45□□□□□ -0.9
CD46-213ENST00000471987 FOXD3Q9UJU5 478 aaPredicted RBP9.45□□□□□ -0.9
CD46-213ENST00000471987 SOX13Q9UN79 622 aa9.45□□□□□ -0.9
CD46-213ENST00000471987 ARL4DP49703 201 aa9.44□□□□□ -0.9
CD46-213ENST00000471987 LRP8Q14114 963 aa9.44□□□□□ -0.9
CD46-213ENST00000471987 KIAA1211Q6ZU35 1233 aa9.44□□□□□ -0.9
CD46-213ENST00000471987 FOXD4L4Q8WXT5 416 aaPredicted RBP9.44□□□□□ -0.9
CD46-213ENST00000471987 NXPE3Q969Y0 559 aa9.44□□□□□ -0.9
CD46-213ENST00000471987 HHIPQ96QV1 700 aa9.44□□□□□ -0.9
CD46-213ENST00000471987 UBL7Q96S82 380 aaPredicted RBP9.44□□□□□ -0.9
CD46-213ENST00000471987 ZKSCAN3Q9BRR0 538 aa9.44□□□□□ -0.9
CD46-213ENST00000471987 AMOTL2Q9Y2J4 779 aa9.44□□□□□ -0.9
CD46-213ENST00000471987 DDX3YO15523 660 aaKnown RBP9.43□□□□□ -0.9
CD46-213ENST00000471987 ICMTO60725 284 aa9.43□□□□□ -0.9
CD46-213ENST00000471987 ADAM11O75078 769 aa9.43□□□□□ -0.9
CD46-213ENST00000471987 UVSSAQ2YD98 709 aa9.43□□□□□ -0.9
CD46-213ENST00000471987 BSNDQ8WZ55 320 aa9.43□□□□□ -0.9
CD46-213ENST00000471987 DHX15O43143 795 aaKnown RBP9.42□□□□□ -0.9
CD46-213ENST00000471987 FSTP19883 344 aa9.42□□□□□ -0.9
CD46-213ENST00000471987 UBASH3BQ8TF42 649 aa9.42□□□□□ -0.9
CD46-213ENST00000471987 SLC7A3Q8WY07 619 aa9.42□□□□□ -0.9
CD46-213ENST00000471987 RNF112Q9ULX5 631 aa9.42□□□□□ -0.9
CD46-213ENST00000471987 RAXQ9Y2V3 346 aa9.42□□□□□ -0.9
CD46-213ENST00000471987 C19orf57Q0VDD7 668 aa9.41□□□□□ -0.9
CD46-213ENST00000471987 LCE3BQ5TA77 95 aa9.41□□□□□ -0.9
CD46-213ENST00000471987 GLYCTKQ8IVS8 523 aa9.41□□□□□ -0.9
CD46-213ENST00000471987 BHLHE41Q9C0J9 482 aaPredicted RBP9.41□□□□□ -0.9
CD46-213ENST00000471987 ZFYVE28Q9HCC9 887 aa9.41□□□□□ -0.9
CD46-213ENST00000471987 H3BRB1 525 aa9.4□□□□□ -0.9
CD46-213ENST00000471987 GSC2O15499 205 aa9.4□□□□□ -0.9
CD46-213ENST00000471987 NLRP12P59046 1061 aa9.4□□□□□ -0.9
CD46-213ENST00000471987 IKBKEQ14164 716 aa9.4□□□□□ -0.9
CD46-213ENST00000471987 UTP4Q969X6 686 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms