RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 ZNF541Q9H0D2 1346 aa18.75■□□□□ 0.59
SNX13-205ENST00000471744 HMMRO75330 724 aa18.75■□□□□ 0.59
SNX13-205ENST00000471744 ATG9AQ7Z3C6 839 aa18.75■□□□□ 0.59
SNX13-205ENST00000471744 VGLL2Q8N8G2 317 aa18.75■□□□□ 0.59
SNX13-205ENST00000471744 PA2G4Q9UQ80 394 aaKnown RBP18.75■□□□□ 0.59
SNX13-205ENST00000471744 SCN9AQ15858 1988 aa18.74■□□□□ 0.59
SNX13-205ENST00000471744 G3BP1Q13283 466 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNX13-205ENST00000471744 PUM3Q15397 648 aaKnown RBP18.74■□□□□ 0.59
SNX13-205ENST00000471744 CIAPIN1Q6FI81 312 aa18.74■□□□□ 0.59
SNX13-205ENST00000471744 ZNF804AQ7Z570 1209 aa18.74■□□□□ 0.59
SNX13-205ENST00000471744 ZNF526Q8TF50 670 aaPredicted RBP18.74■□□□□ 0.59
SNX13-205ENST00000471744 L3MBTL3Q96JM7 780 aaPredicted RBP18.74■□□□□ 0.59
SNX13-205ENST00000471744 DDNO94850 711 aaPredicted RBP18.73■□□□□ 0.59
SNX13-205ENST00000471744 IFIT1P09914 478 aaKnown RBP18.73■□□□□ 0.59
SNX13-205ENST00000471744 CXCL9Q07325 125 aa18.73■□□□□ 0.59
SNX13-205ENST00000471744 DOK7Q18PE1 504 aa18.73■□□□□ 0.59
SNX13-205ENST00000471744 IQCA1LA6NCM1 817 aa18.72■□□□□ 0.59
SNX13-205ENST00000471744 WTIPA6NIX2 430 aaPredicted RBP18.72■□□□□ 0.59
SNX13-205ENST00000471744 YDJCA8MPS7 323 aa18.72■□□□□ 0.59
SNX13-205ENST00000471744 AAMPQ13685 434 aa18.72■□□□□ 0.59
SNX13-205ENST00000471744 NOP58Q9Y2X3 529 aaKnown RBP18.72■□□□□ 0.59
SNX13-205ENST00000471744 IRS2Q9Y4H2 1338 aa18.72■□□□□ 0.59
SNX13-205ENST00000471744 SLC5A1P13866 664 aa18.71■□□□□ 0.59
SNX13-205ENST00000471744 VEGFAP15692 232 aaPredicted RBP18.71■□□□□ 0.59
SNX13-205ENST00000471744 TXNRD3Q86VQ6 643 aa18.71■□□□□ 0.59
SNX13-205ENST00000471744 LPIN2Q92539 896 aa18.71■□□□□ 0.59
SNX13-205ENST00000471744 AKAP2Q9Y2D5 859 aa18.71■□□□□ 0.59
SNX13-205ENST00000471744 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
SNX13-205ENST00000471744 GJA3Q9Y6H8 435 aa18.71■□□□□ 0.59
SNX13-205ENST00000471744 SNAP23O00161 211 aa18.7■□□□□ 0.58
SNX13-205ENST00000471744 SURF6O75683 361 aaKnown RBP18.7■□□□□ 0.58
SNX13-205ENST00000471744 RAD17O75943 681 aa18.7■□□□□ 0.58
SNX13-205ENST00000471744 FGFR2P21802 821 aa18.7■□□□□ 0.58
SNX13-205ENST00000471744 KLRK1P26718 216 aa18.7■□□□□ 0.58
SNX13-205ENST00000471744 OS9Q13438 667 aaPredicted RBP18.7■□□□□ 0.58
SNX13-205ENST00000471744 HSP90AB4PQ58FF6 505 aa18.7■□□□□ 0.58
SNX13-205ENST00000471744 CAVIN4Q5BKX8 364 aa18.7■□□□□ 0.58
SNX13-205ENST00000471744 CD209Q9NNX6 404 aa18.7■□□□□ 0.58
SNX13-205ENST00000471744 USP17L3A6NCW0 530 aa18.69■□□□□ 0.58
SNX13-205ENST00000471744 USP17L4A6NCW7 530 aa18.69■□□□□ 0.58
SNX13-205ENST00000471744 RPS12P25398 132 aaKnown RBP18.69■□□□□ 0.58
SNX13-205ENST00000471744 LMOD1P29536 600 aaPredicted RBP18.69■□□□□ 0.58
SNX13-205ENST00000471744 HIBADHP31937 336 aaKnown RBP18.69■□□□□ 0.58
SNX13-205ENST00000471744 ATP2B3Q16720 1220 aa18.69■□□□□ 0.58
SNX13-205ENST00000471744 USP17L1Q7RTZ2 530 aa18.69■□□□□ 0.58
SNX13-205ENST00000471744 VPS37DQ86XT2 251 aa18.69■□□□□ 0.58
SNX13-205ENST00000471744 RRAGCQ9HB90 399 aa18.69■□□□□ 0.58
SNX13-205ENST00000471744 NMRK2Q9NPI5 230 aa18.69■□□□□ 0.58
SNX13-205ENST00000471744 ARAP2Q8WZ64 1704 aa18.69■□□□□ 0.58
SNX13-205ENST00000471744 MYH13Q9UKX3 1938 aa18.68■□□□□ 0.58
SNX13-205ENST00000471744 ZNF609O15014 1411 aa18.68■□□□□ 0.58
SNX13-205ENST00000471744 PSMD14O00487 310 aa18.68■□□□□ 0.58
SNX13-205ENST00000471744 VIL1P09327 827 aaKnown RBP18.68■□□□□ 0.58
SNX13-205ENST00000471744 IL1R1P14778 569 aa18.68■□□□□ 0.58
SNX13-205ENST00000471744 ERC1Q8IUD2 1116 aa18.68■□□□□ 0.58
SNX13-205ENST00000471744 CRBNQ96SW2 442 aa18.68■□□□□ 0.58
SNX13-205ENST00000471744 HACL1Q9UJ83 578 aa18.68■□□□□ 0.58
SNX13-205ENST00000471744 TFCP2Q12800 502 aa18.67■□□□□ 0.58
SNX13-205ENST00000471744 STRIP1Q5VSL9 837 aa18.67■□□□□ 0.58
SNX13-205ENST00000471744 C16orf71Q8IYS4 520 aaPredicted RBP18.67■□□□□ 0.58
SNX13-205ENST00000471744 DPF2Q92785 391 aa18.67■□□□□ 0.58
SNX13-205ENST00000471744 FAM84BQ96KN1 310 aaPredicted RBP18.67■□□□□ 0.58
SNX13-205ENST00000471744 MYO3BQ8WXR4 1341 aa18.67■□□□□ 0.58
SNX13-205ENST00000471744 FBXO33Q7Z6M2 555 aa18.66■□□□□ 0.58
SNX13-205ENST00000471744 AGBL3Q8NEM8 1001 aa18.66■□□□□ 0.58
SNX13-205ENST00000471744 GPR108Q9NPR9 543 aa18.66■□□□□ 0.58
SNX13-205ENST00000471744 ZNF646O15015 1829 aaPredicted RBP18.65■□□□□ 0.58
SNX13-205ENST00000471744 KIF3CO14782 793 aa18.65■□□□□ 0.58
SNX13-205ENST00000471744 GYG1P46976 350 aa18.65■□□□□ 0.58
SNX13-205ENST00000471744 GMPSP49915 693 aaPredicted RBP18.65■□□□□ 0.58
SNX13-205ENST00000471744 SCNN1DP51172 638 aa18.65■□□□□ 0.58
SNX13-205ENST00000471744 TTLL5Q6EMB2 1281 aa18.65■□□□□ 0.58
SNX13-205ENST00000471744 RSBN1LQ6PCB5 846 aaPredicted RBP18.65■□□□□ 0.58
SNX13-205ENST00000471744 SIRT2Q8IXJ6 389 aa18.65■□□□□ 0.58
SNX13-205ENST00000471744 TDRD7Q8NHU6 1098 aaKnown RBP18.65■□□□□ 0.58
SNX13-205ENST00000471744 KCNQ5Q9NR82 932 aa18.65■□□□□ 0.58
SNX13-205ENST00000471744 GPRC5DQ9NZD1 345 aa18.65■□□□□ 0.58
SNX13-205ENST00000471744 A0A1B0GUL7 405 aa18.64■□□□□ 0.57
SNX13-205ENST00000471744 POTECB2RU33 542 aa18.64■□□□□ 0.57
SNX13-205ENST00000471744 SASH1O94885 1247 aa18.64■□□□□ 0.57
SNX13-205ENST00000471744 MMP14P50281 582 aa18.64■□□□□ 0.57
SNX13-205ENST00000471744 PNMA8AQ86V59 439 aaPredicted RBP18.64■□□□□ 0.57
SNX13-205ENST00000471744 GNL3LQ9NVN8 582 aaKnown RBP18.64■□□□□ 0.57
SNX13-205ENST00000471744 ZBTB22O15209 634 aa18.63■□□□□ 0.57
SNX13-205ENST00000471744 RAB11FIP3O75154 756 aa18.63■□□□□ 0.57
SNX13-205ENST00000471744 FRAT2O75474 233 aaPredicted RBP18.63■□□□□ 0.57
SNX13-205ENST00000471744 EPHX2P34913 555 aa18.63■□□□□ 0.57
SNX13-205ENST00000471744 FKBP1AP62942 108 aaKnown RBP18.63■□□□□ 0.57
SNX13-205ENST00000471744 GTF2IP78347 998 aa18.63■□□□□ 0.57
SNX13-205ENST00000471744 DACT2Q5SW24 774 aa18.63■□□□□ 0.57
SNX13-205ENST00000471744 FBXW7Q969H0 707 aa18.63■□□□□ 0.57
SNX13-205ENST00000471744 TAF1DQ9H5J8 278 aaPredicted RBP18.63■□□□□ 0.57
SNX13-205ENST00000471744 EXOC6BQ9Y2D4 811 aa18.63■□□□□ 0.57
SNX13-205ENST00000471744 FAM205AQ6ZU69 1335 aa18.63■□□□□ 0.57
SNX13-205ENST00000471744 H7C1D1 291 aa18.62■□□□□ 0.57
SNX13-205ENST00000471744 BCAMP50895 628 aa18.62■□□□□ 0.57
SNX13-205ENST00000471744 ADARB2Q9NS39 739 aaKnown RBP18.62■□□□□ 0.57
SNX13-205ENST00000471744 CNOT7Q9UIV1 285 aaKnown RBP18.62■□□□□ 0.57
SNX13-205ENST00000471744 SEMA3EO15041 775 aa18.61■□□□□ 0.57
SNX13-205ENST00000471744 TOMM70O94826 608 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms