RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 HABP4Q5JVS0 413 aaKnown RBP24.55■■□□□ 1.52
NCKIPSD-209ENST00000470006 CCDC191Q8NCU4 936 aa24.55■■□□□ 1.52
NCKIPSD-209ENST00000470006 CWC25Q9NXE8 425 aaPredicted RBP24.55■■□□□ 1.52
NCKIPSD-209ENST00000470006 ALDH1A1P00352 501 aa24.54■■□□□ 1.52
NCKIPSD-209ENST00000470006 CDC5LQ99459 802 aaKnown RBP24.54■■□□□ 1.52
NCKIPSD-209ENST00000470006 PHAXQ9H814 394 aaKnown RBP24.54■■□□□ 1.52
NCKIPSD-209ENST00000470006 ANGEL1Q9UNK9 670 aaKnown RBP24.54■■□□□ 1.52
NCKIPSD-209ENST00000470006 TRIM35Q9UPQ4 493 aa24.54■■□□□ 1.52
NCKIPSD-209ENST00000470006 WTIPA6NIX2 430 aaPredicted RBP24.53■■□□□ 1.52
NCKIPSD-209ENST00000470006 DACT2Q5SW24 774 aa24.53■■□□□ 1.52
NCKIPSD-209ENST00000470006 MYO3BQ8WXR4 1341 aa24.53■■□□□ 1.52
NCKIPSD-209ENST00000470006 SPRYD7Q5W111 196 aa24.52■■□□□ 1.52
NCKIPSD-209ENST00000470006 APOBEC3FQ8IUX4 373 aaKnown RBP24.52■■□□□ 1.52
NCKIPSD-209ENST00000470006 CFHR5Q9BXR6 569 aa24.52■■□□□ 1.52
NCKIPSD-209ENST00000470006 STRIP1Q5VSL9 837 aa24.51■■□□□ 1.51
NCKIPSD-209ENST00000470006 INTS3Q68E01 1043 aaKnown RBP24.51■■□□□ 1.51
NCKIPSD-209ENST00000470006 RUNDC1Q96C34 613 aa24.51■■□□□ 1.51
NCKIPSD-209ENST00000470006 SLC10A4Q96EP9 437 aa24.51■■□□□ 1.51
NCKIPSD-209ENST00000470006 MED23Q9ULK4 1368 aa24.51■■□□□ 1.51
NCKIPSD-209ENST00000470006 POTEFA5A3E0 1075 aa24.5■■□□□ 1.51
NCKIPSD-209ENST00000470006 ELL2O00472 640 aaPredicted RBP24.5■■□□□ 1.51
NCKIPSD-209ENST00000470006 MINPP1Q9UNW1 487 aa24.5■■□□□ 1.51
NCKIPSD-209ENST00000470006 SPEF2Q9C093 1822 aa24.49■■□□□ 1.51
NCKIPSD-209ENST00000470006 MANSC4A6NHS7 340 aaPredicted RBP24.49■■□□□ 1.51
NCKIPSD-209ENST00000470006 CCT4P50991 539 aaKnown RBP24.49■■□□□ 1.51
NCKIPSD-209ENST00000470006 INHBEP58166 350 aa24.49■■□□□ 1.51
NCKIPSD-209ENST00000470006 TTLL5Q6EMB2 1281 aa24.49■■□□□ 1.51
NCKIPSD-209ENST00000470006 KIAA0825Q8IV33 1275 aa24.49■■□□□ 1.51
NCKIPSD-209ENST00000470006 COA1Q9GZY4 146 aa24.49■■□□□ 1.51
NCKIPSD-209ENST00000470006 MBIPQ9NS73 344 aa24.49■■□□□ 1.51
NCKIPSD-209ENST00000470006 FZD1Q9UP38 647 aa24.49■■□□□ 1.51
NCKIPSD-209ENST00000470006 DDX58O95786 925 aaKnown RBP24.48■■□□□ 1.51
NCKIPSD-209ENST00000470006 CTSWP56202 376 aa24.48■■□□□ 1.51
NCKIPSD-209ENST00000470006 WDR43Q15061 677 aaKnown RBP eCLIP24.48■■□□□ 1.51
NCKIPSD-209ENST00000470006 RALBP1Q15311 655 aa24.48■■□□□ 1.51
NCKIPSD-209ENST00000470006 LDLRAD1Q5T700 205 aa24.48■■□□□ 1.51
NCKIPSD-209ENST00000470006 OTOP1Q7RTM1 612 aa24.48■■□□□ 1.51
NCKIPSD-209ENST00000470006 IFNL1Q8IU54 200 aa24.48■■□□□ 1.51
NCKIPSD-209ENST00000470006 BSDC1Q9NW68 430 aaPredicted RBP24.48■■□□□ 1.51
NCKIPSD-209ENST00000470006 MMP14P50281 582 aa24.47■■□□□ 1.51
NCKIPSD-209ENST00000470006 METTL22Q9BUU2 404 aaPredicted RBP24.47■■□□□ 1.51
NCKIPSD-209ENST00000470006 ERO1AQ96HE7 468 aa24.45■■□□□ 1.5
NCKIPSD-209ENST00000470006 GREM2Q9H772 168 aa24.45■■□□□ 1.5
NCKIPSD-209ENST00000470006 KIAA0100Q14667 2235 aaKnown RBP24.45■■□□□ 1.5
NCKIPSD-209ENST00000470006 MKI67P46013 3256 aaKnown RBP24.45■■□□□ 1.5
NCKIPSD-209ENST00000470006 PPP1R12BO60237 982 aaPredicted RBP24.44■■□□□ 1.5
NCKIPSD-209ENST00000470006 GTF2IP78347 998 aa24.44■■□□□ 1.5
NCKIPSD-209ENST00000470006 TXNRD3Q86VQ6 643 aa24.44■■□□□ 1.5
NCKIPSD-209ENST00000470006 TTLL11Q8NHH1 800 aa24.44■■□□□ 1.5
NCKIPSD-209ENST00000470006 DEFB129Q9H1M3 183 aa24.44■■□□□ 1.5
NCKIPSD-209ENST00000470006 IGHMBP2P38935 993 aaKnown RBP24.43■■□□□ 1.5
NCKIPSD-209ENST00000470006 DLGAP5Q15398 846 aa24.43■■□□□ 1.5
NCKIPSD-209ENST00000470006 OTUD7BQ6GQQ9 843 aa24.43■■□□□ 1.5
NCKIPSD-209ENST00000470006 CD99L2Q8TCZ2 262 aa24.43■■□□□ 1.5
NCKIPSD-209ENST00000470006 WNK4Q96J92 1243 aa24.43■■□□□ 1.5
NCKIPSD-209ENST00000470006 PTPN22Q9Y2R2 807 aa24.43■■□□□ 1.5
NCKIPSD-209ENST00000470006 MAP3K2Q9Y2U5 619 aa24.43■■□□□ 1.5
NCKIPSD-209ENST00000470006 LEMD3Q9Y2U8 911 aa24.43■■□□□ 1.5
NCKIPSD-209ENST00000470006 MYH3P11055 1940 aa24.42■■□□□ 1.5
NCKIPSD-209ENST00000470006 ZBTB48P10074 688 aaPredicted RBP24.42■■□□□ 1.5
NCKIPSD-209ENST00000470006 KCNJ4P48050 445 aa24.42■■□□□ 1.5
NCKIPSD-209ENST00000470006 CLMNQ96JQ2 1002 aa24.42■■□□□ 1.5
NCKIPSD-209ENST00000470006 ZNF804BA4D1E1 1349 aa24.41■■□□□ 1.5
NCKIPSD-209ENST00000470006 IGF2BP3O00425 579 aaKnown RBP eCLIP24.41■■□□□ 1.5
NCKIPSD-209ENST00000470006 EN2P19622 333 aaPredicted RBP24.41■■□□□ 1.5
NCKIPSD-209ENST00000470006 EFCC1Q9HA90 598 aa24.41■■□□□ 1.5
NCKIPSD-209ENST00000470006 CENPFP49454 3210 aa24.4■■□□□ 1.5
NCKIPSD-209ENST00000470006 ZNF646O15015 1829 aaPredicted RBP24.4■■□□□ 1.5
NCKIPSD-209ENST00000470006 NEXNQ0ZGT2 675 aa24.4■■□□□ 1.5
NCKIPSD-209ENST00000470006 TMEM106CQ9BVX2 250 aa24.4■■□□□ 1.5
NCKIPSD-209ENST00000470006 HTTP42858 3142 aa24.4■■□□□ 1.5
NCKIPSD-209ENST00000470006 MPHOSPH8Q99549 860 aa24.39■■□□□ 1.49
NCKIPSD-209ENST00000470006 ANKRD2Q9GZV1 360 aa24.39■■□□□ 1.49
NCKIPSD-209ENST00000470006 COL1A1P02452 1464 aaPredicted RBP24.38■■□□□ 1.49
NCKIPSD-209ENST00000470006 MYO1BO43795 1136 aa24.38■■□□□ 1.49
NCKIPSD-209ENST00000470006 KLRK1P26718 216 aa24.38■■□□□ 1.49
NCKIPSD-209ENST00000470006 GNAI1P63096 354 aa24.38■■□□□ 1.49
NCKIPSD-209ENST00000470006 CRHR2Q13324 411 aa24.38■■□□□ 1.49
NCKIPSD-209ENST00000470006 SUPT20HL1Q3ZLR7 823 aa24.38■■□□□ 1.49
NCKIPSD-209ENST00000470006 CCDC30Q5VVM6 783 aa24.38■■□□□ 1.49
NCKIPSD-209ENST00000470006 ZBED3Q96IU2 234 aaPredicted RBP24.38■■□□□ 1.49
NCKIPSD-209ENST00000470006 ADAMTS8Q9UP79 889 aa24.38■■□□□ 1.49
NCKIPSD-209ENST00000470006 F8W031 263 aaPredicted RBP24.37■■□□□ 1.49
NCKIPSD-209ENST00000470006 IREB2P48200 963 aaKnown RBP24.37■■□□□ 1.49
NCKIPSD-209ENST00000470006 SP3Q02447 781 aa24.37■■□□□ 1.49
NCKIPSD-209ENST00000470006 MAP3K11Q16584 847 aa24.37■■□□□ 1.49
NCKIPSD-209ENST00000470006 CHMP4AQ9BY43 222 aa24.37■■□□□ 1.49
NCKIPSD-209ENST00000470006 VEZTQ9HBM0 779 aa24.37■■□□□ 1.49
NCKIPSD-209ENST00000470006 IFT57Q9NWB7 429 aa24.37■■□□□ 1.49
NCKIPSD-209ENST00000470006 CLRN2A0PK11 232 aa24.36■■□□□ 1.49
NCKIPSD-209ENST00000470006 PI4KAP2A4QPH2 592 aa24.36■■□□□ 1.49
NCKIPSD-209ENST00000470006 IGKV5-2P06315 115 aa24.36■■□□□ 1.49
NCKIPSD-209ENST00000470006 ZNF853P0CG23 659 aa24.36■■□□□ 1.49
NCKIPSD-209ENST00000470006 FXR1P51114 621 aaKnown RBP eCLIP24.36■■□□□ 1.49
NCKIPSD-209ENST00000470006 CALD1Q05682 793 aaKnown RBP24.36■■□□□ 1.49
NCKIPSD-209ENST00000470006 KSR2Q6VAB6 950 aa24.36■■□□□ 1.49
NCKIPSD-209ENST00000470006 PI4KAP1Q8N8J0 262 aa24.36■■□□□ 1.49
NCKIPSD-209ENST00000470006 C8orf58Q8NAV2 365 aa24.36■■□□□ 1.49
NCKIPSD-209ENST00000470006 PPP2R3BQ9Y5P8 575 aa24.36■■□□□ 1.49
NCKIPSD-209ENST00000470006 RBBP6Q7Z6E9 1792 aaKnown RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms