RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 GTF3C2Q8WUA4 911 aaPredicted RBP5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 SAP130Q9H0E3 1048 aa5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 LRFN2Q9ULH4 789 aa5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 CENPJQ9HC77 1338 aaPredicted RBP5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 SCAF11Q99590 1463 aaKnown RBP5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 NRXN1Q9ULB1 1477 aa5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 TRPM1Q7Z4N2 1603 aa5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 ALKQ9UM73 1620 aa5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 IFT172Q9UG01 1749 aa5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 TNFRSF10BO14763 440 aa5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 SLIT1O75093 1534 aa5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 NPHP4O75161 1426 aaPredicted RBP5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 SERPINB4P48594 390 aa5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 SF3B2Q13435 895 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 DGKZQ13574 1117 aa5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 EIF3AQ14152 1382 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 C11orf91Q3C1V1 193 aa5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 GPRASP1Q5JY77 1395 aa5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 DIEXFQ68CQ4 756 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 SUSD3Q96L08 255 aa5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 NUCKS1Q9H1E3 243 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 YTHDC2Q9H6S0 1430 aaKnown RBP5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 CUEDC1Q9NWM3 386 aaPredicted RBP5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 ARHGAP23Q9P227 1491 aa5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 ANKIB1Q9P2G1 1089 aa5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 GJA3Q9Y6H8 435 aa5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 DNMT3AQ9Y6K1 912 aaPredicted RBP5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 IVNS1ABPQ9Y6Y0 642 aa5.61□□□□□ -1.51
TMEM39A-204ENST00000468545 ADAMTS13Q76LX8 1427 aa5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 LRPPRCP42704 1394 aaKnown RBP5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 WASHC2AQ641Q2 1341 aa5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 TGFBR3LH3BV60 316 aa5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 ABL1P00519 1130 aa5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 THBS1P07996 1170 aa5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 KCNA6P17658 529 aa5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 ZNF211Q13398 564 aaPredicted RBP5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 SAMD5Q5TGI4 173 aa5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 IER5Q5VY09 327 aa5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 FIGNL1Q6PIW4 674 aa5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 TMC1Q8TDI8 760 aa5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 ZNF837Q96EG3 531 aaPredicted RBP5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 HSH2DQ96JZ2 352 aa5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 NEUROD4Q9HD90 331 aa5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 KLK14Q9P0G3 267 aa5.6□□□□□ -1.51
TMEM39A-204ENST00000468545 PLEKHH1Q9ULM0 1364 aa5.59□□□□□ -1.51
TMEM39A-204ENST00000468545 KIF7Q2M1P5 1343 aa5.59□□□□□ -1.51
TMEM39A-204ENST00000468545 BRD2P25440 801 aaKnown RBP5.59□□□□□ -1.51
TMEM39A-204ENST00000468545 DBN1Q16643 649 aa5.59□□□□□ -1.51
TMEM39A-204ENST00000468545 LRRC69Q6ZNQ3 347 aa5.59□□□□□ -1.51
TMEM39A-204ENST00000468545 ABTB2Q8N961 1025 aa5.59□□□□□ -1.51
TMEM39A-204ENST00000468545 ZSCAN1Q8NBB4 408 aa5.59□□□□□ -1.51
TMEM39A-204ENST00000468545 ZNF280CQ8ND82 737 aa5.59□□□□□ -1.51
TMEM39A-204ENST00000468545 NANOS1Q8WY41 292 aaKnown RBP5.59□□□□□ -1.51
TMEM39A-204ENST00000468545 KLRG1Q96E93 195 aa5.59□□□□□ -1.51
TMEM39A-204ENST00000468545 TESK2Q96S53 571 aa5.59□□□□□ -1.51
TMEM39A-204ENST00000468545 CDK19Q9BWU1 502 aa5.59□□□□□ -1.51
TMEM39A-204ENST00000468545 STIM2Q9P246 746 aa5.59□□□□□ -1.51
TMEM39A-204ENST00000468545 BCS1LQ9Y276 419 aa5.59□□□□□ -1.51
TMEM39A-204ENST00000468545 KDM5AP29375 1690 aaKnown RBP5.59□□□□□ -1.52
TMEM39A-204ENST00000468545 LMTK3Q96Q04 1460 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 PTPRUQ92729 1446 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 ABCC11Q96J66 1382 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 CCDC7Q96M83 1385 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 DISP3Q9P2K9 1392 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 EVC2Q86UK5 1308 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 KIAA1210Q9ULL0 1709 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 CDC14CA4D256 554 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 SOWAHDA6NJG2 315 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 H3BRB1 525 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 ICMTO60725 284 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 FAM157BP0CG42 384 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 NPR3P17342 541 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 LORP23490 312 aaPredicted RBP5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 FKBP4Q02790 459 aaKnown RBP eCLIP5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 MTMR3Q13615 1198 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 UBAP2LQ14157 1087 aaKnown RBP5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 BTLAQ7Z6A9 289 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 IFT43Q96FT9 208 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 TUT1Q9H6E5 874 aaKnown RBP5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 IQGAP1P46940 1657 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 ZNF142P52746 1687 aaPredicted RBP5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 ADGRB1O14514 1584 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 SETBP1Q9Y6X0 1596 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 ASXL1Q8IXJ9 1541 aa5.58□□□□□ -1.52
TMEM39A-204ENST00000468545 ROBO2Q9HCK4 1378 aa5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 NRXN3Q9Y4C0 1643 aa5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 ZBTB7CA1YPR0 619 aa5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 ATXN7O15265 892 aaPredicted RBP5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 FAM13AO94988 1023 aa5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 VSIG8P0DPA2 414 aa5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 TYRO3Q06418 890 aa5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 FOXR1Q6PIV2 292 aa5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 SV2AQ7L0J3 742 aa5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 TREML1Q86YW5 311 aa5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 GLYCTKQ8IVS8 523 aa5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 ETFBKMTQ8IXQ9 262 aa5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 GTPBP3Q969Y2 492 aaKnown RBP5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 ZCCHC2Q9C0B9 1178 aaKnown RBP5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 ANO2Q9NQ90 1003 aa5.57□□□□□ -1.52
TMEM39A-204ENST00000468545 DMGDHQ9UI17 866 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms