RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 EDC3Q96F86 508 aaKnown RBP11.38□□□□□ -0.59
PRPF3-202ENST00000467329 FAM227BQ96M60 508 aa11.38□□□□□ -0.59
PRPF3-202ENST00000467329 STK32BQ9NY57 414 aa11.38□□□□□ -0.59
PRPF3-202ENST00000467329 ZNF804BA4D1E1 1349 aa11.38□□□□□ -0.59
PRPF3-202ENST00000467329 DOCK2Q92608 1830 aa11.38□□□□□ -0.59
PRPF3-202ENST00000467329 BAG6P46379 1132 aa11.38□□□□□ -0.59
PRPF3-202ENST00000467329 TMC4Q7Z404 712 aa11.38□□□□□ -0.59
PRPF3-202ENST00000467329 HELBQ8NG08 1087 aaPredicted RBP11.38□□□□□ -0.59
PRPF3-202ENST00000467329 RBM17Q96I25 401 aaKnown RBP11.38□□□□□ -0.59
PRPF3-202ENST00000467329 CRAMP1Q96RY5 1269 aa11.38□□□□□ -0.59
PRPF3-202ENST00000467329 PDS5AQ29RF7 1337 aaKnown RBP11.38□□□□□ -0.59
PRPF3-202ENST00000467329 MCAMP43121 646 aa11.37□□□□□ -0.59
PRPF3-202ENST00000467329 PHKA1P46020 1223 aa11.37□□□□□ -0.59
PRPF3-202ENST00000467329 SF3B2Q13435 895 aaKnown RBP11.37□□□□□ -0.59
PRPF3-202ENST00000467329 MCMDC2Q4G0Z9 681 aa11.37□□□□□ -0.59
PRPF3-202ENST00000467329 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.37□□□□□ -0.599e-7■■■□□ 16.1
PRPF3-202ENST00000467329 ANKRD31Q8N7Z5 1873 aa11.37□□□□□ -0.59
PRPF3-202ENST00000467329 SEMA3EO15041 775 aa11.37□□□□□ -0.59
PRPF3-202ENST00000467329 SCARF1Q14162 830 aa11.37□□□□□ -0.59
PRPF3-202ENST00000467329 SLC15A2Q16348 729 aa11.37□□□□□ -0.59
PRPF3-202ENST00000467329 RPGRQ92834 1020 aaKnown RBP11.37□□□□□ -0.59
PRPF3-202ENST00000467329 MAP4K1Q92918 833 aa11.37□□□□□ -0.59
PRPF3-202ENST00000467329 GNL3LQ9NVN8 582 aaKnown RBP11.37□□□□□ -0.59
PRPF3-202ENST00000467329 IGSF3O75054 1194 aa11.36□□□□□ -0.59
PRPF3-202ENST00000467329 TAF5LO75529 589 aa11.36□□□□□ -0.59
PRPF3-202ENST00000467329 TAF1P21675 1872 aa11.36□□□□□ -0.59
PRPF3-202ENST00000467329 ZAP70P43403 619 aa11.36□□□□□ -0.59
PRPF3-202ENST00000467329 CCDC125Q86Z20 511 aa11.36□□□□□ -0.59
PRPF3-202ENST00000467329 BRIP1Q9BX63 1249 aa11.36□□□□□ -0.59
PRPF3-202ENST00000467329 ST18O60284 1047 aa11.36□□□□□ -0.59
PRPF3-202ENST00000467329 BBOX1O75936 387 aa11.36□□□□□ -0.59
PRPF3-202ENST00000467329 EZH2Q15910 746 aaKnown RBP11.36□□□□□ -0.59
PRPF3-202ENST00000467329 C15orf52Q6ZUT6 534 aaKnown RBP11.36□□□□□ -0.59
PRPF3-202ENST00000467329 DUOX1Q9NRD9 1551 aa11.36□□□□□ -0.59
PRPF3-202ENST00000467329 MCM2P49736 904 aa11.35□□□□□ -0.59
PRPF3-202ENST00000467329 FKBP4Q02790 459 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRPF3-202ENST00000467329 EN1Q05925 392 aaPredicted RBP11.35□□□□□ -0.59
PRPF3-202ENST00000467329 ERICH6Q7L0X2 663 aa11.35□□□□□ -0.59
PRPF3-202ENST00000467329 SPATA5Q8NB90 893 aa11.35□□□□□ -0.59
PRPF3-202ENST00000467329 HMG20BQ9P0W2 317 aa11.35□□□□□ -0.59
PRPF3-202ENST00000467329 LEMD3Q9Y2U8 911 aa11.35□□□□□ -0.59
PRPF3-202ENST00000467329 NDUFB9Q9Y6M9 179 aa11.35□□□□□ -0.59
PRPF3-202ENST00000467329 U3KPZ7 1027 aaPredicted RBP11.35□□□□□ -0.59
PRPF3-202ENST00000467329 PTH1RQ03431 593 aa11.35□□□□□ -0.59
PRPF3-202ENST00000467329 NECTIN1Q15223 517 aa11.35□□□□□ -0.59
PRPF3-202ENST00000467329 TMED8Q6PL24 325 aaPredicted RBP11.35□□□□□ -0.59
PRPF3-202ENST00000467329 FBXO33Q7Z6M2 555 aa11.35□□□□□ -0.59
PRPF3-202ENST00000467329 APPBP2Q92624 585 aa11.35□□□□□ -0.59
PRPF3-202ENST00000467329 DSCC1Q9BVC3 393 aa11.35□□□□□ -0.59
PRPF3-202ENST00000467329 TM6SF1Q9BZW5 370 aa11.35□□□□□ -0.59
PRPF3-202ENST00000467329 PARP3Q9Y6F1 533 aa11.35□□□□□ -0.59
PRPF3-202ENST00000467329 UBE3CQ15386 1083 aa11.34□□□□□ -0.59
PRPF3-202ENST00000467329 CAVIN4Q5BKX8 364 aa11.34□□□□□ -0.59
PRPF3-202ENST00000467329 RNF20Q5VTR2 975 aa11.34□□□□□ -0.59
PRPF3-202ENST00000467329 CCDC24Q8N4L8 307 aa11.34□□□□□ -0.59
PRPF3-202ENST00000467329 ANTXR1Q9H6X2 564 aa11.34□□□□□ -0.59
PRPF3-202ENST00000467329 ANO8Q9HCE9 1232 aaPredicted RBP11.34□□□□□ -0.59
PRPF3-202ENST00000467329 RBM8AQ9Y5S9 174 aaKnown RBP11.34□□□□□ -0.59
PRPF3-202ENST00000467329 XDHP47989 1333 aa11.34□□□□□ -0.59
PRPF3-202ENST00000467329 IRS2Q9Y4H2 1338 aa11.34□□□□□ -0.59
PRPF3-202ENST00000467329 K7ELQ4 463 aaPredicted RBP11.34□□□□□ -0.59
PRPF3-202ENST00000467329 CYP2E1P05181 493 aaPredicted RBP11.34□□□□□ -0.59
PRPF3-202ENST00000467329 KCNJ4P48050 445 aa11.34□□□□□ -0.59
PRPF3-202ENST00000467329 RASGRF1Q13972 1273 aa11.34□□□□□ -0.59
PRPF3-202ENST00000467329 TSGA10IPQ3SY00 556 aa11.34□□□□□ -0.59
PRPF3-202ENST00000467329 PALD1Q9ULE6 856 aa11.34□□□□□ -0.59
PRPF3-202ENST00000467329 SNX14Q9Y5W7 946 aa11.34□□□□□ -0.59
PRPF3-202ENST00000467329 MAST3O60307 1309 aa11.34□□□□□ -0.59
PRPF3-202ENST00000467329 LTBP1Q14766 1721 aa11.33□□□□□ -0.6
PRPF3-202ENST00000467329 ADD2P35612 726 aa11.33□□□□□ -0.6
PRPF3-202ENST00000467329 PDE6BP35913 854 aa11.33□□□□□ -0.6
PRPF3-202ENST00000467329 ZNF589Q86UQ0 364 aaPredicted RBP11.33□□□□□ -0.6
PRPF3-202ENST00000467329 PIH1D3Q9NQM4 214 aaKnown RBP11.33□□□□□ -0.6
PRPF3-202ENST00000467329 DENND2AQ9ULE3 1009 aa11.33□□□□□ -0.6
PRPF3-202ENST00000467329 MMP10P09238 476 aa11.33□□□□□ -0.6
PRPF3-202ENST00000467329 NPR1P16066 1061 aa11.33□□□□□ -0.6
PRPF3-202ENST00000467329 BCAMP50895 628 aa11.33□□□□□ -0.6
PRPF3-202ENST00000467329 PODXL2Q9NZ53 605 aa11.33□□□□□ -0.6
PRPF3-202ENST00000467329 MAST2Q6P0Q8 1798 aa11.33□□□□□ -0.6
PRPF3-202ENST00000467329 ZKSCAN1P17029 563 aaPredicted RBP11.32□□□□□ -0.6
PRPF3-202ENST00000467329 ATP2B4P23634 1241 aa11.32□□□□□ -0.6
PRPF3-202ENST00000467329 CREB3L3Q68CJ9 461 aa11.32□□□□□ -0.6
PRPF3-202ENST00000467329 FAM84BQ96KN1 310 aaPredicted RBP11.32□□□□□ -0.6
PRPF3-202ENST00000467329 COL11A2P13942 1736 aaPredicted RBP11.32□□□□□ -0.6
PRPF3-202ENST00000467329 SLC27A2O14975 620 aa11.32□□□□□ -0.6
PRPF3-202ENST00000467329 SLC4A3P48751 1232 aa11.32□□□□□ -0.6
PRPF3-202ENST00000467329 MAP3K12Q12852 859 aa11.32□□□□□ -0.6
PRPF3-202ENST00000467329 KRT32Q14532 448 aa11.32□□□□□ -0.6
PRPF3-202ENST00000467329 RPAP1Q9BWH6 1393 aaPredicted RBP11.32□□□□□ -0.6
PRPF3-202ENST00000467329 PSMA5P28066 241 aa11.31□□□□□ -0.6
PRPF3-202ENST00000467329 PI16Q6UXB8 463 aa11.31□□□□□ -0.6
PRPF3-202ENST00000467329 MYH13Q9UKX3 1938 aa11.31□□□□□ -0.6
PRPF3-202ENST00000467329 TCRBV5S4A2TA0A5A2 114 aa11.31□□□□□ -0.6
PRPF3-202ENST00000467329 M0R2C6 588 aa11.31□□□□□ -0.6
PRPF3-202ENST00000467329 SNAP23O00161 211 aa11.31□□□□□ -0.6
PRPF3-202ENST00000467329 PDE6AP16499 860 aa11.31□□□□□ -0.6
PRPF3-202ENST00000467329 PRPF40BQ6NWY9 871 aaKnown RBP11.31□□□□□ -0.6
PRPF3-202ENST00000467329 SP8Q8IXZ3 490 aa11.31□□□□□ -0.6
PRPF3-202ENST00000467329 SLC16A10Q8TF71 515 aa11.31□□□□□ -0.6
PRPF3-202ENST00000467329 OSBP2Q969R2 916 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms