RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 KIF4AO95239 1232 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 LDHBP07195 334 aaKnown RBP3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 NRLP54845 237 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 DAB2P98082 770 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 MRPL58Q14197 206 aaKnown RBP3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 ZNF326Q5BKZ1 582 aaKnown RBP3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 LDLRAD1Q5T700 205 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 KIAA0319Q5VV43 1072 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 CEP120Q8N960 986 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 TTC16Q8NEE8 873 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 TNFRSF25Q93038 417 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 CCDC74AQ96AQ1 378 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 FRMD6Q96NE9 622 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 FMNL2Q96PY5 1086 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 RNF19AQ9NV58 838 aa3.32□□□□□ -1.88
NUCKS1-202ENST00000464938 PNMA6FA0A0J9YX94 578 aa3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 PHACTR2O75167 634 aa3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 CYP2E1P05181 493 aaPredicted RBP3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 RARAP10276 462 aa3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 NFKB1P19838 968 aa3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 MAPK8P45983 427 aa3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 GPLD1P80108 840 aa3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 COL13A1Q5TAT6 717 aaPredicted RBP3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 TTC39BQ5VTQ0 682 aaPredicted RBP3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 PEAR1Q5VY43 1037 aaPredicted RBP3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 DHX32Q7L7V1 743 aaKnown RBP3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 TMC4Q7Z404 712 aa3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 BHMTQ93088 406 aa3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 DUSP9Q99956 384 aaKnown RBP3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 SSBP4Q9BWG4 385 aaPredicted RBP3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 PRDM6Q9NQX0 595 aa3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 PARP2Q9UGN5 583 aa3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 STARD13Q9Y3M8 1113 aa3.31□□□□□ -1.88
NUCKS1-202ENST00000464938 COL17A1Q9UMD9 1497 aaPredicted RBP3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 A0A1W2PP55 124 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 FAM229AH3BQW9 127 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 NFKBIEO00221 500 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 GIPC1O14908 333 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 PSAPP07602 524 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 NID1P14543 1247 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 CES1P23141 567 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 GNA15P30679 374 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 PCBP4P57723 403 aaKnown RBP3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 PLAURQ03405 335 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 ADGRE1Q14246 886 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 MBTPS1Q14703 1052 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 ILDR2Q71H61 639 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 KRT25Q7Z3Z0 450 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 NPM2Q86SE8 214 aaKnown RBP3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 SYT9Q86SS6 491 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 GLIS3Q8NEA6 775 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 EPS8L3Q8TE67 593 aaKnown RBP3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 ANKRD24Q8TF21 1146 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 OSBPL7Q9BZF2 842 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 AK5Q9Y6K8 562 aa3.3□□□□□ -1.88
NUCKS1-202ENST00000464938 ELOA3CA0A087WX78 387 aaPredicted RBP3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 LOC102724428A0A0B4J2F2 783 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 ELOA3DA6NLF2 546 aaPredicted RBP3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 POLR3DP05423 398 aaPredicted RBP3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 CTSHP09668 335 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 EDN3P14138 238 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 SELPP16109 830 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 RBM25P49756 843 aaKnown RBP3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 SIK1P57059 783 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 ATP2B2Q01814 1243 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 HYAL2Q12891 473 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 NEUROD1Q13562 356 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 GRIK4Q16099 956 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 PCSK7Q16549 785 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 ELOA3BQ3SY89 546 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 PRPF40BQ6NWY9 871 aaKnown RBP3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 PI16Q6UXB8 463 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 RAB44Q7Z6P3 723 aaPredicted RBP3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 ELOA3Q8NG57 546 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 TTC9Q92623 222 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 PNMA5Q96PV4 448 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 TCF12Q99081 682 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 DZANK1Q9NVP4 752 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 DNAJB12Q9NXW2 375 aaKnown RBP3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 PRR12Q9ULL5 1215 aa3.29□□□□□ -1.88
NUCKS1-202ENST00000464938 SPDYE3A6NKU9 549 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 E9PSI1 815 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 RECKO95980 971 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 APBA3O96018 575 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 GRM2Q14416 872 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 PRRT3Q5FWE3 981 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 C20orf204Q6ZNR8 217 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 CCNJLQ8IV13 435 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 TMEM102Q8N9M5 508 aaPredicted RBP3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 NXPE3Q969Y0 559 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 MRRFQ96E11 262 aaKnown RBP3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 NACC1Q96RE7 527 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 SRCIN1Q9C0H9 1055 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 BHLHE41Q9C0J9 482 aaPredicted RBP3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 NPHS2Q9NP85 383 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 LATS2Q9NRM7 1088 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 FRRS1LQ9P0K9 344 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 KANSL3Q9P2N6 904 aa3.28□□□□□ -1.88
NUCKS1-202ENST00000464938 SLC6A14Q9UN76 642 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms