RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 CRACR2AQ9BSW2 395 aa4.46□□□□□ -1.69
CCNL1-204ENST00000464316 PARD6BQ9BYG5 372 aa4.46□□□□□ -1.69
CCNL1-204ENST00000464316 FANCAO15360 1455 aa4.46□□□□□ -1.69
CCNL1-204ENST00000464316 CTAGE15A4D2H0 777 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 IKBKBO14920 756 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 ERLIN2O94905 339 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 SEC31AO94979 1220 aaKnown RBP4.46□□□□□ -1.7
CCNL1-204ENST00000464316 TBC1D8O95759 1140 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 CCDC175P0C221 793 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 CTAGE8P0CG41 777 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 CDR1P51861 262 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 FANCCQ00597 558 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 TRDNQ13061 729 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 STK3Q13188 491 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 G3BP1Q13283 466 aaKnown RBP eCLIP4.46□□□□□ -1.7
CCNL1-204ENST00000464316 CT47A1Q5JQC4 288 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-204ENST00000464316 CTAGE6Q86UF2 777 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 CTAGE4Q8IX94 777 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 FSD1Q9BTV5 496 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 ZCCHC17Q9NP64 241 aaKnown RBP4.46□□□□□ -1.7
CCNL1-204ENST00000464316 SLC52A1Q9NWF4 448 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 KIAA1468Q9P260 1216 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 BCCIPQ9P287 314 aaKnown RBP eCLIP4.46□□□□□ -1.7
CCNL1-204ENST00000464316 PEAK1Q9H792 1746 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 FAM83GA6ND36 823 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 STX10O60499 249 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 RPS6KB1P23443 525 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 NLRP12P59046 1061 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 KRT24Q2M2I5 525 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 GBP6Q6ZN66 633 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 C11orf57Q6ZUT1 292 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-204ENST00000464316 PPP1R42Q7Z4L9 355 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 TADA2BQ86TJ2 420 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 PPFIBP1Q86W92 1011 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 SPATS2Q86XZ4 545 aaKnown RBP4.46□□□□□ -1.7
CCNL1-204ENST00000464316 CCDC148Q8NFR7 591 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 BAG1Q99933 345 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-204ENST00000464316 TPCN1Q9ULQ1 816 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 ABCC3O15438 1527 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 ADGRL3Q9HAR2 1447 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 SALL3Q9BXA9 1300 aa4.46□□□□□ -1.7
CCNL1-204ENST00000464316 ARHGEF10O15013 1369 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 PLEKHG2Q9H7P9 1386 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 SLIT1O75093 1534 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 A0A1W2PQ27 194 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 A0A1W2PQ64 194 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 A0A1W2PQD8 194 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 NUTM2FA1L443 756 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 CPA1P15085 419 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 MYL5Q02045 173 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 FILIP1LQ4L180 1135 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 NUTM2GQ5VZR2 741 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 ADALQ6DHV7 355 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 IQCEQ6IPM2 695 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 B4GALNT4Q76KP1 1039 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 SRGAP1Q7Z6B7 1085 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 CEP120Q8N960 986 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 AFAP1L1Q8TED9 768 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 NEK1Q96PY6 1258 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 PPP2R2CQ9Y2T4 447 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 U3KPZ7 1027 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-204ENST00000464316 MAP3K5Q99683 1374 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 PNMA6EA0A0J9YXQ4 647 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 MAP3K9P80192 1104 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 TSR1Q2NL82 804 aaKnown RBP4.45□□□□□ -1.7
CCNL1-204ENST00000464316 UNC5CLQ8IV45 518 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 PGBD1Q96JS3 809 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 RUFY1Q96T51 708 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 FUT8Q9BYC5 575 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 CXorf56Q9H5V9 222 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 PDE11AQ9HCR9 933 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 EMILIN1Q9Y6C2 1016 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 CTAGE9A4FU28 777 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 WDHD1O75717 1129 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-204ENST00000464316 LARGE1O95461 756 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 LMOD1P29536 600 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-204ENST00000464316 SF3B2Q13435 895 aaKnown RBP4.45□□□□□ -1.7
CCNL1-204ENST00000464316 NECTIN1Q15223 517 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 CPLX2Q6PUV4 134 aaKnown RBP4.45□□□□□ -1.7
CCNL1-204ENST00000464316 MCM10Q7L590 875 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 MAP4K1Q92918 833 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 KCNB2Q92953 911 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 DONSONQ9NYP3 566 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 C9orf78Q9NZ63 289 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-204ENST00000464316 CDC23Q9UJX2 597 aa4.45□□□□□ -1.7
CCNL1-204ENST00000464316 SLC27A2O14975 620 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 INPP5BP32019 993 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 NF2P35240 595 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 NUTM2DQ5VT03 806 aaPredicted RBP4.44□□□□□ -1.7
CCNL1-204ENST00000464316 DHX40Q8IX18 779 aaKnown RBP4.44□□□□□ -1.7
CCNL1-204ENST00000464316 NAA15Q9BXJ9 866 aaKnown RBP4.44□□□□□ -1.7
CCNL1-204ENST00000464316 UBXN6Q9BZV1 441 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 COL3A1P02461 1466 aaPredicted RBP4.44□□□□□ -1.7
CCNL1-204ENST00000464316 CPLX1O14810 134 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 IPO7O95373 1038 aaKnown RBP4.44□□□□□ -1.7
CCNL1-204ENST00000464316 YEATS4O95619 227 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 RESTQ13127 1097 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 WHAMMP3Q1A5X7 153 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 ARMCX5Q6P1M9 558 aa4.44□□□□□ -1.7
CCNL1-204ENST00000464316 CNNM3Q8NE01 707 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms