RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 DALRD3Q5D0E6 543 aaKnown RBP17.59■□□□□ 0.41
COL6A1-202ENST00000463060 MPNDQ8N594 471 aa17.59■□□□□ 0.41
COL6A1-202ENST00000463060 ZNF512BQ96KM6 892 aaPredicted RBP17.59■□□□□ 0.41
COL6A1-202ENST00000463060 SYT17Q9BSW7 474 aa17.59■□□□□ 0.41
COL6A1-202ENST00000463060 RTFDC1Q9BY42 306 aaPredicted RBP17.59■□□□□ 0.41
COL6A1-202ENST00000463060 ANKIB1Q9P2G1 1089 aa17.59■□□□□ 0.41
COL6A1-202ENST00000463060 C21orf2O43822 256 aa17.58■□□□□ 0.4
COL6A1-202ENST00000463060 ATP5JP18859 108 aa17.58■□□□□ 0.4
COL6A1-202ENST00000463060 GRIPAP1Q4V328 841 aa17.58■□□□□ 0.4
COL6A1-202ENST00000463060 FBXO33Q7Z6M2 555 aa17.58■□□□□ 0.4
COL6A1-202ENST00000463060 TXNRD3Q86VQ6 643 aa17.58■□□□□ 0.4
COL6A1-202ENST00000463060 FAM84BQ96KN1 310 aaPredicted RBP17.58■□□□□ 0.4
COL6A1-202ENST00000463060 BCL11AQ9H165 835 aa17.58■□□□□ 0.4
COL6A1-202ENST00000463060 GGA1Q9UJY5 639 aa17.58■□□□□ 0.4
COL6A1-202ENST00000463060 KLRK1P26718 216 aa17.57■□□□□ 0.4
COL6A1-202ENST00000463060 TSHZ3Q63HK5 1081 aa17.57■□□□□ 0.4
COL6A1-202ENST00000463060 CCDC102BQ68D86 513 aa17.57■□□□□ 0.4
COL6A1-202ENST00000463060 KLHL34Q8N239 644 aa17.57■□□□□ 0.4
COL6A1-202ENST00000463060 GSPT1P15170 499 aaKnown RBP17.56■□□□□ 0.4
COL6A1-202ENST00000463060 PHKA1P46020 1223 aa17.56■□□□□ 0.4
COL6A1-202ENST00000463060 BCAMP50895 628 aa17.56■□□□□ 0.4
COL6A1-202ENST00000463060 DPP8Q6V1X1 898 aaPredicted RBP17.56■□□□□ 0.4
COL6A1-202ENST00000463060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.56■□□□□ 0.4
COL6A1-202ENST00000463060 ZNF219Q9P2Y4 722 aaPredicted RBP17.56■□□□□ 0.4
COL6A1-202ENST00000463060 GLRX3O76003 335 aaKnown RBP17.55■□□□□ 0.4
COL6A1-202ENST00000463060 UFL1O94874 794 aa17.55■□□□□ 0.4
COL6A1-202ENST00000463060 ARID4AP29374 1257 aaPredicted RBP17.55■□□□□ 0.4
COL6A1-202ENST00000463060 CCDC93Q567U6 631 aa17.55■□□□□ 0.4
COL6A1-202ENST00000463060 TTC22Q5TAA0 569 aa17.55■□□□□ 0.4
COL6A1-202ENST00000463060 RTKN2Q8IZC4 609 aa17.55■□□□□ 0.4
COL6A1-202ENST00000463060 GPATCH3Q96I76 525 aa17.55■□□□□ 0.4
COL6A1-202ENST00000463060 TMX4Q9H1E5 349 aaPredicted RBP17.55■□□□□ 0.4
COL6A1-202ENST00000463060 MED23Q9ULK4 1368 aa17.54■□□□□ 0.4
COL6A1-202ENST00000463060 GYG1P46976 350 aa17.54■□□□□ 0.4
COL6A1-202ENST00000463060 KCNJ4P48050 445 aa17.54■□□□□ 0.4
COL6A1-202ENST00000463060 CCDC158Q5M9N0 1113 aa17.54■□□□□ 0.4
COL6A1-202ENST00000463060 SOGA3Q5TF21 947 aa17.54■□□□□ 0.4
COL6A1-202ENST00000463060 GPR101Q96P66 508 aaPredicted RBP17.54■□□□□ 0.4
COL6A1-202ENST00000463060 PSMD1Q99460 953 aa17.54■□□□□ 0.4
COL6A1-202ENST00000463060 AKAP11Q9UKA4 1901 aa17.53■□□□□ 0.4
COL6A1-202ENST00000463060 C6orf229H3BNL8 230 aa17.53■□□□□ 0.4
COL6A1-202ENST00000463060 ERC2O15083 957 aa17.53■□□□□ 0.4
COL6A1-202ENST00000463060 SCARF1Q14162 830 aa17.53■□□□□ 0.4
COL6A1-202ENST00000463060 BMP2KLQ5H9B9 411 aa17.53■□□□□ 0.4
COL6A1-202ENST00000463060 GORABQ5T7V8 394 aa17.53■□□□□ 0.4
COL6A1-202ENST00000463060 HAUS7Q99871 368 aa17.53■□□□□ 0.4
COL6A1-202ENST00000463060 ARFGEF1Q9Y6D6 1849 aa17.53■□□□□ 0.4
COL6A1-202ENST00000463060 UQCRFS1P1P0C7P4 283 aa17.52■□□□□ 0.4
COL6A1-202ENST00000463060 HIBADHP31937 336 aaKnown RBP17.52■□□□□ 0.4
COL6A1-202ENST00000463060 CAVIN4Q5BKX8 364 aa17.52■□□□□ 0.4
COL6A1-202ENST00000463060 BOLA2Q9H3K6 86 aa17.52■□□□□ 0.4
COL6A1-202ENST00000463060 BCS1LQ9Y276 419 aa17.52■□□□□ 0.4
COL6A1-202ENST00000463060 MCAMP43121 646 aa17.51■□□□□ 0.39
COL6A1-202ENST00000463060 FER1L6Q2WGJ9 1857 aa17.51■□□□□ 0.39
COL6A1-202ENST00000463060 TTC39AQ5SRH9 613 aa17.51■□□□□ 0.39
COL6A1-202ENST00000463060 TDRD7Q8NHU6 1098 aaKnown RBP17.51■□□□□ 0.39
COL6A1-202ENST00000463060 VPS33BQ9H267 617 aa17.51■□□□□ 0.39
COL6A1-202ENST00000463060 HMG20BQ9P0W2 317 aa17.51■□□□□ 0.39
COL6A1-202ENST00000463060 WWC3Q9ULE0 1092 aa17.51■□□□□ 0.39
COL6A1-202ENST00000463060 NFKBIEO00221 500 aa17.5■□□□□ 0.39
COL6A1-202ENST00000463060 IL1R1P14778 569 aa17.5■□□□□ 0.39
COL6A1-202ENST00000463060 SDSP20132 328 aa17.5■□□□□ 0.39
COL6A1-202ENST00000463060 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.39
COL6A1-202ENST00000463060 RASGRF1Q13972 1273 aa17.5■□□□□ 0.39
COL6A1-202ENST00000463060 WASHC4Q2M389 1173 aa17.5■□□□□ 0.39
COL6A1-202ENST00000463060 SUPT20HQ8NEM7 779 aa17.5■□□□□ 0.39
COL6A1-202ENST00000463060 EYA3Q99504 573 aa17.5■□□□□ 0.39
COL6A1-202ENST00000463060 ZC3H12CQ9C0D7 883 aaKnown RBP17.5■□□□□ 0.39
COL6A1-202ENST00000463060 CD209Q9NNX6 404 aa17.5■□□□□ 0.39
COL6A1-202ENST00000463060 PDS5AQ29RF7 1337 aaKnown RBP17.49■□□□□ 0.39
COL6A1-202ENST00000463060 LTBP3Q9NS15 1303 aa17.49■□□□□ 0.39
COL6A1-202ENST00000463060 SEMA3EO15041 775 aa17.49■□□□□ 0.39
COL6A1-202ENST00000463060 KIAA2012Q0VF49 1180 aa17.49■□□□□ 0.39
COL6A1-202ENST00000463060 PI16Q6UXB8 463 aa17.49■□□□□ 0.39
COL6A1-202ENST00000463060 COA1Q9GZY4 146 aa17.49■□□□□ 0.39
COL6A1-202ENST00000463060 RIMBP2O15034 1052 aa17.48■□□□□ 0.39
COL6A1-202ENST00000463060 ZAP70P43403 619 aa17.48■□□□□ 0.39
COL6A1-202ENST00000463060 ZNF804AQ7Z570 1209 aa17.48■□□□□ 0.39
COL6A1-202ENST00000463060 EDC3Q96F86 508 aaKnown RBP17.48■□□□□ 0.39
COL6A1-202ENST00000463060 SNRKQ9NRH2 765 aa17.48■□□□□ 0.39
COL6A1-202ENST00000463060 GNL3LQ9NVN8 582 aaKnown RBP17.48■□□□□ 0.39
COL6A1-202ENST00000463060 NDUFB9Q9Y6M9 179 aa17.48■□□□□ 0.39
COL6A1-202ENST00000463060 COL1A1P02452 1464 aaPredicted RBP17.48■□□□□ 0.39
COL6A1-202ENST00000463060 CYP2E1P05181 493 aaPredicted RBP17.47■□□□□ 0.39
COL6A1-202ENST00000463060 SPATA5Q8NB90 893 aa17.47■□□□□ 0.39
COL6A1-202ENST00000463060 IQSEC3Q9UPP2 1182 aaPredicted RBP17.47■□□□□ 0.39
COL6A1-202ENST00000463060 CHD4Q14839 1912 aa17.47■□□□□ 0.39
COL6A1-202ENST00000463060 MAP4K4O95819 1239 aaPredicted RBP17.46■□□□□ 0.39
COL6A1-202ENST00000463060 TICAM2Q86XR7 235 aa17.46■□□□□ 0.39
COL6A1-202ENST00000463060 VPS37DQ86XT2 251 aa17.46■□□□□ 0.39
COL6A1-202ENST00000463060 EVI5LQ96CN4 794 aa17.46■□□□□ 0.39
COL6A1-202ENST00000463060 ANTXR1Q9H6X2 564 aa17.46■□□□□ 0.39
COL6A1-202ENST00000463060 PAG1Q9NWQ8 432 aa17.46■□□□□ 0.39
COL6A1-202ENST00000463060 DENND2AQ9ULE3 1009 aa17.46■□□□□ 0.39
COL6A1-202ENST00000463060 FAM205AQ6ZU69 1335 aa17.46■□□□□ 0.38
COL6A1-202ENST00000463060 YBX3P16989 372 aaKnown RBP eCLIP17.45■□□□□ 0.38
COL6A1-202ENST00000463060 PRELPP51888 382 aa17.45■□□□□ 0.38
COL6A1-202ENST00000463060 AOC3Q16853 763 aa17.45■□□□□ 0.38
COL6A1-202ENST00000463060 PODNQ7Z5L7 613 aa17.45■□□□□ 0.38
COL6A1-202ENST00000463060 COL4A5P29400 1685 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms