RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 HPS5Q9UPZ3 1129 aa20.29■□□□□ 0.84
SND1-203ENST00000463020 MAP3K2Q9Y2U5 619 aa20.29■□□□□ 0.84
SND1-203ENST00000463020 PITPNM2Q9BZ72 1349 aa20.28■□□□□ 0.84
SND1-203ENST00000463020 ATP2B4P23634 1241 aa20.28■□□□□ 0.84
SND1-203ENST00000463020 TTLL11Q8NHH1 800 aa20.28■□□□□ 0.84
SND1-203ENST00000463020 ZNF296Q8WUU4 475 aaPredicted RBP20.28■□□□□ 0.84
SND1-203ENST00000463020 R3HDMLQ9H3Y0 253 aa20.28■□□□□ 0.84
SND1-203ENST00000463020 MED23Q9ULK4 1368 aa20.27■□□□□ 0.84
SND1-203ENST00000463020 SASH1O94885 1247 aa20.27■□□□□ 0.84
SND1-203ENST00000463020 FZD1Q9UP38 647 aa20.27■□□□□ 0.84
SND1-203ENST00000463020 CENPFP49454 3210 aa20.27■□□□□ 0.83
SND1-203ENST00000463020 FKBP1BP68106 108 aa20.26■□□□□ 0.83
SND1-203ENST00000463020 CWF19L2Q2TBE0 894 aaKnown RBP20.26■□□□□ 0.83
SND1-203ENST00000463020 PODNQ7Z5L7 613 aa20.26■□□□□ 0.83
SND1-203ENST00000463020 WNT10BO00744 389 aa20.25■□□□□ 0.83
SND1-203ENST00000463020 G2E3Q7L622 706 aa20.25■□□□□ 0.83
SND1-203ENST00000463020 FBXW7Q969H0 707 aa20.25■□□□□ 0.83
SND1-203ENST00000463020 PI4KAP2A4QPH2 592 aa20.24■□□□□ 0.83
SND1-203ENST00000463020 CCT4P50991 539 aaKnown RBP20.24■□□□□ 0.83
SND1-203ENST00000463020 GNAI1P63096 354 aa20.24■□□□□ 0.83
SND1-203ENST00000463020 PRKG1Q13976 671 aa20.24■□□□□ 0.83
SND1-203ENST00000463020 PI4KAP1Q8N8J0 262 aa20.24■□□□□ 0.83
SND1-203ENST00000463020 TSR2Q969E8 191 aaKnown RBP20.24■□□□□ 0.83
SND1-203ENST00000463020 BSDC1Q9NW68 430 aaPredicted RBP20.24■□□□□ 0.83
SND1-203ENST00000463020 BRCA2P51587 3418 aa20.24■□□□□ 0.83
SND1-203ENST00000463020 PTPN12Q05209 780 aaKnown RBP20.23■□□□□ 0.83
SND1-203ENST00000463020 PCDHAC2Q9Y5I4 1007 aa20.23■□□□□ 0.83
SND1-203ENST00000463020 SNAP23O00161 211 aa20.22■□□□□ 0.83
SND1-203ENST00000463020 HSP90B1P14625 803 aaKnown RBP20.22■□□□□ 0.83
SND1-203ENST00000463020 TTLL12Q14166 644 aaPredicted RBP20.22■□□□□ 0.83
SND1-203ENST00000463020 KSR2Q6VAB6 950 aa20.22■□□□□ 0.83
SND1-203ENST00000463020 CDC5LQ99459 802 aaKnown RBP20.22■□□□□ 0.83
SND1-203ENST00000463020 MYH3P11055 1940 aa20.21■□□□□ 0.83
SND1-203ENST00000463020 NEURL1BA8MQ27 555 aa20.21■□□□□ 0.83
SND1-203ENST00000463020 TM4SF4P48230 202 aa20.21■□□□□ 0.83
SND1-203ENST00000463020 REM2Q8IYK8 340 aaPredicted RBP20.21■□□□□ 0.83
SND1-203ENST00000463020 ZBED3Q96IU2 234 aaPredicted RBP20.21■□□□□ 0.83
SND1-203ENST00000463020 PRKRIP1Q9H875 184 aaPredicted RBP20.21■□□□□ 0.83
SND1-203ENST00000463020 AOX1Q06278 1338 aa20.21■□□□□ 0.83
SND1-203ENST00000463020 SSC5DA1L4H1 1573 aa20.21■□□□□ 0.83
SND1-203ENST00000463020 GPR25O00155 361 aa20.2■□□□□ 0.82
SND1-203ENST00000463020 DDX58O95786 925 aaKnown RBP20.2■□□□□ 0.82
SND1-203ENST00000463020 STRIP1Q5VSL9 837 aa20.2■□□□□ 0.82
SND1-203ENST00000463020 CCDC30Q5VVM6 783 aa20.2■□□□□ 0.82
SND1-203ENST00000463020 UBE3BQ7Z3V4 1068 aa20.2■□□□□ 0.82
SND1-203ENST00000463020 KIAA0825Q8IV33 1275 aa20.2■□□□□ 0.82
SND1-203ENST00000463020 H7C1W4 665 aa20.19■□□□□ 0.82
SND1-203ENST00000463020 CASP7P55210 303 aa20.19■□□□□ 0.82
SND1-203ENST00000463020 CERS5Q8N5B7 392 aa20.19■□□□□ 0.82
SND1-203ENST00000463020 COA1Q9GZY4 146 aa20.19■□□□□ 0.82
SND1-203ENST00000463020 HDAC9Q9UKV0 1011 aa20.19■□□□□ 0.82
SND1-203ENST00000463020 IRS2Q9Y4H2 1338 aa20.19■□□□□ 0.82
SND1-203ENST00000463020 CCDC184Q52MB2 194 aa20.17■□□□□ 0.82
SND1-203ENST00000463020 LDLRAD1Q5T700 205 aa20.17■□□□□ 0.82
SND1-203ENST00000463020 PRPF38BQ5VTL8 546 aaKnown RBP20.17■□□□□ 0.82
SND1-203ENST00000463020 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.17■□□□□ 0.82
SND1-203ENST00000463020 ZNF804BA4D1E1 1349 aa20.17■□□□□ 0.82
SND1-203ENST00000463020 ITGA6P23229 1130 aa20.16■□□□□ 0.82
SND1-203ENST00000463020 GTF2IP78347 998 aa20.16■□□□□ 0.82
SND1-203ENST00000463020 TTLL5Q6EMB2 1281 aa20.16■□□□□ 0.82
SND1-203ENST00000463020 OGFOD1Q8N543 542 aa20.16■□□□□ 0.82
SND1-203ENST00000463020 CLMNQ96JQ2 1002 aa20.16■□□□□ 0.82
SND1-203ENST00000463020 SPRYD7Q5W111 196 aa20.15■□□□□ 0.82
SND1-203ENST00000463020 ANGEL1Q9UNK9 670 aaKnown RBP20.15■□□□□ 0.82
SND1-203ENST00000463020 LEMD3Q9Y2U8 911 aa20.15■□□□□ 0.82
SND1-203ENST00000463020 MYO3BQ8WXR4 1341 aa20.15■□□□□ 0.82
SND1-203ENST00000463020 A0A1B0GUL6 1792 aa20.14■□□□□ 0.81
SND1-203ENST00000463020 CALD1Q05682 793 aaKnown RBP20.14■□□□□ 0.81
SND1-203ENST00000463020 GCKRQ14397 625 aa20.14■□□□□ 0.81
SND1-203ENST00000463020 PKN2Q16513 984 aaKnown RBP20.14■□□□□ 0.81
SND1-203ENST00000463020 PCDH10Q9P2E7 1040 aa20.14■□□□□ 0.81
SND1-203ENST00000463020 TAF5LO75529 589 aa20.13■□□□□ 0.81
SND1-203ENST00000463020 CSF1RP07333 972 aa20.13■□□□□ 0.81
SND1-203ENST00000463020 IGHMBP2P38935 993 aaKnown RBP20.13■□□□□ 0.81
SND1-203ENST00000463020 CAP1Q01518 475 aa20.13■□□□□ 0.81
SND1-203ENST00000463020 CHRNDQ07001 517 aa20.13■□□□□ 0.81
SND1-203ENST00000463020 FBXO46Q6PJ61 603 aaPredicted RBP20.13■□□□□ 0.81
SND1-203ENST00000463020 HELBQ8NG08 1087 aaPredicted RBP20.13■□□□□ 0.81
SND1-203ENST00000463020 PLA2G12BQ9BX93 195 aa20.13■□□□□ 0.81
SND1-203ENST00000463020 CFHR5Q9BXR6 569 aa20.13■□□□□ 0.81
SND1-203ENST00000463020 JAG2Q9Y219 1238 aa20.13■□□□□ 0.81
SND1-203ENST00000463020 IGF2BP3O00425 579 aaKnown RBP eCLIP20.12■□□□□ 0.81
SND1-203ENST00000463020 FKTNO75072 461 aa20.12■□□□□ 0.81
SND1-203ENST00000463020 SLC4A2P04920 1241 aa20.12■□□□□ 0.81
SND1-203ENST00000463020 NF2P35240 595 aa20.12■□□□□ 0.81
SND1-203ENST00000463020 NEXNQ0ZGT2 675 aa20.12■□□□□ 0.81
SND1-203ENST00000463020 NOM1Q5C9Z4 860 aaKnown RBP20.12■□□□□ 0.81
SND1-203ENST00000463020 ARMC9Q7Z3E5 817 aa20.12■□□□□ 0.81
SND1-203ENST00000463020 APOBEC3FQ8IUX4 373 aaKnown RBP20.12■□□□□ 0.81
SND1-203ENST00000463020 DEFB129Q9H1M3 183 aa20.12■□□□□ 0.81
SND1-203ENST00000463020 CD209Q9NNX6 404 aa20.12■□□□□ 0.81
SND1-203ENST00000463020 GJA5P36382 358 aa20.11■□□□□ 0.81
SND1-203ENST00000463020 SREBF2Q12772 1141 aa20.11■□□□□ 0.81
SND1-203ENST00000463020 TWISTNBQ3B726 338 aaPredicted RBP20.11■□□□□ 0.81
SND1-203ENST00000463020 CLRN2A0PK11 232 aa20.1■□□□□ 0.81
SND1-203ENST00000463020 F8W031 263 aaPredicted RBP20.1■□□□□ 0.81
SND1-203ENST00000463020 STK31Q9BXU1 1019 aa20.1■□□□□ 0.81
SND1-203ENST00000463020 POTEFA5A3E0 1075 aa20.09■□□□□ 0.81
SND1-203ENST00000463020 FLIIQ13045 1269 aa20.09■□□□□ 0.81
SND1-203ENST00000463020 IFNL1Q8IU54 200 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms